FFCP PHASE1:Hg19::chr9:74383770..74383795,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23670 | |EntrezGene=23670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11869 | |HGNC=11869 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHN6 | |UniProt=Q9UHN6 | ||
|association_with_transcript=4bp_to_ENST00000377044,NM_001135820,NM_013390,uc010mos.2,uc011lsa.1,uc011lsb.1_5end | |association_with_transcript=4bp_to_ENST00000377044,NM_001135820,NM_013390,uc010mos.2,uc011lsa.1,uc011lsb.1_5end | ||
|cluster_id=chr9:74383770..74383795,- | |||
|coexpression_cluster_id=C4827 | |coexpression_cluster_id=C4827 | ||
|description=CAGE_peak_3_at_TMEM2_5end | |description=CAGE_peak_3_at_TMEM2_5end | ||
|id=chr9:74383770..74383795,- | |id=chr9:74383770..74383795,- | ||
|ontology_enrichment_celltype=CL:0002057!7.39e-19!42;CL:0000860!1.32e-16!45;CL:0002194!2.62e-11!63;CL:0000576!2.62e-11!63;CL:0000040!2.62e-11!63;CL:0000559!2.62e-11!63;CL:0000766!5.59e-11!76;CL:0002009!6.95e-11!65;CL:0002087!1.38e-09!119;CL:0000557!1.52e-09!71;CL:0000839!2.84e-09!70;CL:0000738!5.49e-08!140;CL:0002031!8.80e-08!124 | |ontology_enrichment_celltype=CL:0002057!7.39e-19!42;CL:0000860!1.32e-16!45;CL:0002194!2.62e-11!63;CL:0000576!2.62e-11!63;CL:0000040!2.62e-11!63;CL:0000559!2.62e-11!63;CL:0000766!5.59e-11!76;CL:0002009!6.95e-11!65;CL:0002087!1.38e-09!119;CL:0000557!1.52e-09!71;CL:0000839!2.84e-09!70;CL:0000738!5.49e-08!140;CL:0002031!8.80e-08!124 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.11e-16;33!CL:0002057;9.11e-16;33!CL:0000473;6.62e-12;39!CL:0000234;6.62e-12;39!CL:0000576;4.25e-11;48!CL:0000766;7.70e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.93e-19,42;CL:0002057,3.93e-19,42;CL:0000473,1.26e-17,48;CL:0000234,1.26e-17,48;CL:0002194,1.39e-12,59;CL:0000576,1.39e-12,59;CL:0000040,1.39e-12,59;CL:0000559,1.39e-12,59;CL:0002009,4.36e-12,61;CL:0000766,6.47e-12,72;CL:0002087,4.39e-11,115;CL:0000557,1.70e-10,67;CL:0000839,3.30e-10,66;CL:0000738,5.99e-09,136;CL:0002031,6.26e-09,120 | |||
|ontology_enrichment_development_v019=CL:0002057;5.95e-14;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.71e-09!115;UBERON:0002390!1.40e-08!102;UBERON:0003061!1.40e-08!102;UBERON:0002193!1.55e-08!112 | |ontology_enrichment_uberon=UBERON:0002405!2.71e-09!115;UBERON:0002390!1.40e-08!102;UBERON:0003061!1.40e-08!102;UBERON:0002193!1.55e-08!112 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.52e-09,108;UBERON:0002390,1.81e-09,98;UBERON:0003061,1.81e-09,98;UBERON:0002405,3.23e-08,93;UBERON:0002371,2.43e-07,76;UBERON:0001474,9.99e-07,82 | |||
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| ||
|short_description=p3@TMEM2 | |short_description=p3@TMEM2 | ||
}} | }} |
Latest revision as of 19:17, 17 September 2015
Short description: | p3@TMEM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMEM2_5end |
Coexpression cluster: | C4827_pleomorphic_CD14_Natural_signet_CD4_CD8_placenta |
Association with transcript: | 4bp_to_ENST00000377044, NM_001135820, NM_013390, uc010mos.2, uc011lsa.1, uc011lsb.1_5end |
EntrezGene: | TMEM2 |
HGNC: | 11869 |
UniProt: | Q9UHN6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.93e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.93e-19 | 42 |
defensive cell | 1.26e-17 | 48 |
phagocyte | 1.26e-17 | 48 |
monopoietic cell | 1.39e-12 | 59 |
monocyte | 1.39e-12 | 59 |
monoblast | 1.39e-12 | 59 |
promonocyte | 1.39e-12 | 59 |
macrophage dendritic cell progenitor | 4.36e-12 | 61 |
myeloid leukocyte | 6.47e-12 | 72 |
nongranular leukocyte | 4.39e-11 | 115 |
granulocyte monocyte progenitor cell | 1.70e-10 | 67 |
myeloid lineage restricted progenitor cell | 3.30e-10 | 66 |
leukocyte | 5.99e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 6.26e-09 | 120 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.52e-09 | 108 |
hematopoietic system | 1.81e-09 | 98 |
blood island | 1.81e-09 | 98 |
immune system | 3.23e-08 | 93 |
bone marrow | 2.43e-07 | 76 |
bone element | 9.99e-07 | 82 |