FFCP PHASE1:Hg19::chr21:17443471..17443515,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=388815 | |EntrezGene=388815 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=1274 | |HGNC=1274 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=37bp_to_,-37bp_to_ENST00000400178,ENST00000456342,uc010glc.2_5end | |association_with_transcript=37bp_to_,-37bp_to_ENST00000400178,ENST00000456342,uc010glc.2_5end | ||
|cluster_id=chr21:17443471..17443515,+ | |||
|coexpression_cluster_id=C334 | |||
|description=CAGE_peak_10_at_LINC00478_5end | |description=CAGE_peak_10_at_LINC00478_5end | ||
|id=chr21:17443471..17443515,+ | |id=chr21:17443471..17443515,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000135;2.81e-07;3!CL:0000388;2.81e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,3.62e-07,3;CL:0000388,3.62e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.19e-18;82!UBERON:0006215;1.74e-08;3!UBERON:0006241;2.75e-08;3!UBERON:0003057;2.75e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.32e-59!57;UBERON:0005068!2.32e-59!57;UBERON:0006241!2.32e-59!57;UBERON:0007135!2.32e-59!57;UBERON:0002616!4.76e-57!59;UBERON:0001017!8.12e-57!82;UBERON:0005743!4.86e-55!86;UBERON:0000955!2.24e-52!69;UBERON:0006238!2.24e-52!69;UBERON:0000073!1.77e-50!94;UBERON:0001016!1.77e-50!94;UBERON:0003075!7.17e-46!86;UBERON:0007284!7.17e-46!86;UBERON:0003080!3.57e-45!42;UBERON:0007023!2.69e-44!115;UBERON:0002780!3.08e-44!41;UBERON:0001890!3.08e-44!41;UBERON:0006240!3.08e-44!41;UBERON:0002346!9.65e-43!90;UBERON:0002020!1.33e-36!34;UBERON:0003528!1.33e-36!34;UBERON:0001893!1.43e-36!34;UBERON:0002791!1.70e-35!33;UBERON:0001869!2.37e-34!32;UBERON:0003056!2.55e-32!61;UBERON:0000153!3.21e-32!129;UBERON:0007811!3.21e-32!129;UBERON:0000033!7.95e-32!123;UBERON:0004121!1.12e-29!169;UBERON:0000924!2.48e-28!173;UBERON:0006601!2.48e-28!173;UBERON:0000956!2.71e-26!25;UBERON:0000203!2.71e-26!25;UBERON:0002619!6.55e-24!22;UBERON:0001950!9.91e-22!20;UBERON:0000475!3.05e-21!365;UBERON:0003076!9.45e-15!15;UBERON:0003057!9.45e-15!15;UBERON:0000119!1.06e-13!312;UBERON:0000483!1.09e-13!309;UBERON:0000481!4.70e-13!347;UBERON:0004732!3.38e-12!13;UBERON:0002420!9.50e-12!9;UBERON:0007245!9.50e-12!9;UBERON:0010009!9.50e-12!9;UBERON:0010011!9.50e-12!9;UBERON:0000454!9.50e-12!9;UBERON:0002308!1.09e-11!9;UBERON:0000125!1.09e-11!9;UBERON:0000477!1.11e-11!286;UBERON:0004733!2.53e-11!12;UBERON:0002028!2.53e-11!12;UBERON:0007277!2.53e-11!12;UBERON:0000062!3.30e-11!511;UBERON:0000025!4.61e-11!194;UBERON:0002298!7.01e-10!8;UBERON:0000467!7.23e-10!625;UBERON:0000480!8.83e-10!626;UBERON:0004111!9.72e-10!241;UBERON:0000468!1.27e-09!659;UBERON:0009663!1.66e-09!7;UBERON:0001894!6.06e-09!7;UBERON:0006222!6.06e-09!7;UBERON:0000922!6.50e-09!612;UBERON:0002050!1.43e-08!605;UBERON:0005423!1.43e-08!605;UBERON:0002680!3.20e-08!9;UBERON:0001895!3.20e-08!9;UBERON:0010092!3.20e-08!9;UBERON:0000923!3.69e-08!604;UBERON:0005291!3.69e-08!604;UBERON:0006598!3.69e-08!604;UBERON:0002532!3.69e-08!604;UBERON:0000064!4.28e-08!219;UBERON:0000200!5.31e-08!6;UBERON:0001871!8.66e-08!7;UBERON:0001872!2.85e-07!5;UBERON:0000349!4.43e-07!5;UBERON:0002021!7.28e-07!5 | |ontology_enrichment_uberon=UBERON:0001049!2.32e-59!57;UBERON:0005068!2.32e-59!57;UBERON:0006241!2.32e-59!57;UBERON:0007135!2.32e-59!57;UBERON:0002616!4.76e-57!59;UBERON:0001017!8.12e-57!82;UBERON:0005743!4.86e-55!86;UBERON:0000955!2.24e-52!69;UBERON:0006238!2.24e-52!69;UBERON:0000073!1.77e-50!94;UBERON:0001016!1.77e-50!94;UBERON:0003075!7.17e-46!86;UBERON:0007284!7.17e-46!86;UBERON:0003080!3.57e-45!42;UBERON:0007023!2.69e-44!115;UBERON:0002780!3.08e-44!41;UBERON:0001890!3.08e-44!41;UBERON:0006240!3.08e-44!41;UBERON:0002346!9.65e-43!90;UBERON:0002020!1.33e-36!34;UBERON:0003528!1.33e-36!34;UBERON:0001893!1.43e-36!34;UBERON:0002791!1.70e-35!33;UBERON:0001869!2.37e-34!32;UBERON:0003056!2.55e-32!61;UBERON:0000153!3.21e-32!129;UBERON:0007811!3.21e-32!129;UBERON:0000033!7.95e-32!123;UBERON:0004121!1.12e-29!169;UBERON:0000924!2.48e-28!173;UBERON:0006601!2.48e-28!173;UBERON:0000956!2.71e-26!25;UBERON:0000203!2.71e-26!25;UBERON:0002619!6.55e-24!22;UBERON:0001950!9.91e-22!20;UBERON:0000475!3.05e-21!365;UBERON:0003076!9.45e-15!15;UBERON:0003057!9.45e-15!15;UBERON:0000119!1.06e-13!312;UBERON:0000483!1.09e-13!309;UBERON:0000481!4.70e-13!347;UBERON:0004732!3.38e-12!13;UBERON:0002420!9.50e-12!9;UBERON:0007245!9.50e-12!9;UBERON:0010009!9.50e-12!9;UBERON:0010011!9.50e-12!9;UBERON:0000454!9.50e-12!9;UBERON:0002308!1.09e-11!9;UBERON:0000125!1.09e-11!9;UBERON:0000477!1.11e-11!286;UBERON:0004733!2.53e-11!12;UBERON:0002028!2.53e-11!12;UBERON:0007277!2.53e-11!12;UBERON:0000062!3.30e-11!511;UBERON:0000025!4.61e-11!194;UBERON:0002298!7.01e-10!8;UBERON:0000467!7.23e-10!625;UBERON:0000480!8.83e-10!626;UBERON:0004111!9.72e-10!241;UBERON:0000468!1.27e-09!659;UBERON:0009663!1.66e-09!7;UBERON:0001894!6.06e-09!7;UBERON:0006222!6.06e-09!7;UBERON:0000922!6.50e-09!612;UBERON:0002050!1.43e-08!605;UBERON:0005423!1.43e-08!605;UBERON:0002680!3.20e-08!9;UBERON:0001895!3.20e-08!9;UBERON:0010092!3.20e-08!9;UBERON:0000923!3.69e-08!604;UBERON:0005291!3.69e-08!604;UBERON:0006598!3.69e-08!604;UBERON:0002532!3.69e-08!604;UBERON:0000064!4.28e-08!219;UBERON:0000200!5.31e-08!6;UBERON:0001871!8.66e-08!7;UBERON:0001872!2.85e-07!5;UBERON:0000349!4.43e-07!5;UBERON:0002021!7.28e-07!5 | ||
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|short_description=p10@LINC00478 | |short_description=p10@LINC00478 | ||
}} | }} |
Latest revision as of 19:26, 17 September 2015
Short description: | p10@LINC00478 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_LINC00478_5end |
Coexpression cluster: | C334_cerebellum_pineal_occipital_pituitary_amygdala_medial_caudate |
Association with transcript: | 37bp_to_, -37bp_to_ENST00000400178, ENST00000456342, uc010glc.2_5end |
EntrezGene: | LINC00478 |
HGNC: | 1274 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 3.62e-07 | 3 |
tendon cell | 3.62e-07 | 3 |