FFCP PHASE1:Hg19::chr21:17443471..17443515,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr21:17443471..17443515,+
|short_description=p10@LINC00478
|description=CAGE_peak_10_at_LINC00478_5end
|association_with_transcript=37bp_to_,-37bp_to_ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=388815 | |EntrezGene=388815 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=1274 | |HGNC=1274 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=37bp_to_,-37bp_to_ENST00000400178,ENST00000456342,uc010glc.2_5end | |||
|cluster_id=chr21:17443471..17443515,+ | |||
|coexpression_cluster_id=C334 | |||
|description=CAGE_peak_10_at_LINC00478_5end | |||
|id=chr21:17443471..17443515,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000135;2.81e-07;3!CL:0000388;2.81e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,3.62e-07,3;CL:0000388,3.62e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.19e-18;82!UBERON:0006215;1.74e-08;3!UBERON:0006241;2.75e-08;3!UBERON:0003057;2.75e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;2.49e-51;34!UBERON:0003528;3.48e-51;34!UBERON:0002020;3.48e-51;34!UBERON:0002780;2.60e-50;41!UBERON:0001890;2.60e-50;41!UBERON:0001869;3.30e-50;32!UBERON:0002791;3.40e-50;32!UBERON:0000073;1.34e-48;53!UBERON:0002616;1.34e-48;53!UBERON:0002619;6.94e-44;22!UBERON:0000956;1.00e-41;25!UBERON:0000203;1.00e-41;25!UBERON:0001950;9.69e-40;20!UBERON:0000955;1.20e-31;68!UBERON:0001017;5.61e-31;75!UBERON:0001016;5.49e-25;83!UBERON:0002420;2.63e-20;9!UBERON:0007245;2.63e-20;9!UBERON:0010009;2.63e-20;9!UBERON:0010011;2.63e-20;9!UBERON:0000454;2.63e-20;9!UBERON:0000125;3.02e-20;9!UBERON:0002308;3.02e-20;9!UBERON:0007023;1.75e-16;114!UBERON:0004732;3.23e-16;13!UBERON:0009663;3.54e-16;7!UBERON:0004733;1.23e-14;12!UBERON:0002028;1.23e-14;12!UBERON:0000200;1.25e-13;6!UBERON:0002298;1.98e-13;6!UBERON:0001872;3.29e-12;5!UBERON:0001894;5.81e-12;7!UBERON:0001871;6.71e-12;6!UBERON:0000349;9.19e-12;5!UBERON:0002021;2.40e-11;5!UBERON:0002784;1.16e-10;4!UBERON:0000369;3.46e-10;4!UBERON:0002435;3.46e-10;4!UBERON:0000204;3.46e-10;4!UBERON:0011216;1.85e-09;132!UBERON:0002680;2.64e-09;9!UBERON:0001895;2.64e-09;9!UBERON:0010314;2.44e-08;132!UBERON:0005383;2.53e-08;3!UBERON:0005382;2.53e-08;3!UBERON:0002240;2.75e-08;3!UBERON:0005174;2.75e-08;3!UBERON:0001137;2.75e-08;3!UBERON:0000988;1.29e-07;3!UBERON:0001896;1.78e-07;3!UBERON:0001870;1.78e-07;3!UBERON:0005290;1.78e-07;3!UBERON:0007846;2.81e-07;3!UBERON:0000043;2.81e-07;3!UBERON:0007845;2.81e-07;3!UBERON:0006947;8.99e-07;3!UBERON:0004054;8.99e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.76e-92,56;UBERON:0005068,2.76e-92,56;UBERON:0006241,2.76e-92,56;UBERON:0007135,2.76e-92,56;UBERON:0000073,2.12e-85,53;UBERON:0002616,2.12e-85,53;UBERON:0001017,3.09e-72,81;UBERON:0000955,1.07e-71,68;UBERON:0006238,1.07e-71,68;UBERON:0002780,1.55e-71,41;UBERON:0001890,1.55e-71,41;UBERON:0003080,1.55e-71,41;UBERON:0006240,1.55e-71,41;UBERON:0003075,1.86e-66,82;UBERON:0007284,1.86e-66,82;UBERON:0001016,4.59e-66,89;UBERON:0002346,1.11e-62,86;UBERON:0003528,1.00e-60,34;UBERON:0002020,1.00e-60,34;UBERON:0001893,1.14e-60,34;UBERON:0007023,1.55e-56,114;UBERON:0001869,1.55e-56,32;UBERON:0002791,1.65e-56,32;UBERON:0010371,9.75e-54,104;UBERON:0003056,1.90e-52,61;UBERON:0002619,7.34e-44,22;UBERON:0000956,1.32e-41,25;UBERON:0000203,1.32e-41,25;UBERON:0010314,1.04e-40,132;UBERON:0001950,9.18e-40,20;UBERON:0004121,8.28e-33,171;UBERON:0000924,8.28e-33,171;UBERON:0006601,8.28e-33,171;UBERON:0011216,2.09e-25,223;UBERON:0003076,7.70e-21,15;UBERON:0003057,7.70e-21,15;UBERON:0002420,1.45e-20,9;UBERON:0007245,1.45e-20,9;UBERON:0010009,1.45e-20,9;UBERON:0010011,1.45e-20,9;UBERON:0000454,1.45e-20,9;UBERON:0000125,1.87e-20,9;UBERON:0002308,1.87e-20,9;UBERON:0000025,5.96e-19,192;UBERON:0009663,2.23e-16,7;UBERON:0004732,2.58e-16,13;UBERON:0004111,1.65e-15,240;UBERON:0004733,9.89e-15,12;UBERON:0002028,9.89e-15,12;UBERON:0007277,9.89e-15,12;UBERON:0000483,2.88e-14,306;UBERON:0000119,5.67e-14,309;UBERON:0000200,1.41e-13,6;UBERON:0002298,1.51e-13,6;UBERON:0001872,3.20e-12,5;UBERON:0001894,6.25e-12,7;UBERON:0006222,6.25e-12,7;UBERON:0000349,7.29e-12,5;UBERON:0001871,8.82e-12,6;UBERON:0002021,1.83e-11,5;UBERON:0002784,1.07e-10,4;UBERON:0000369,2.69e-10,4;UBERON:0002435,2.69e-10,4;UBERON:0000204,2.69e-10,4;UBERON:0010082,2.69e-10,4;UBERON:0002680,2.52e-09,9;UBERON:0001895,2.52e-09,9;UBERON:0010092,2.52e-09,9;UBERON:0005383,2.45e-08,3;UBERON:0005382,2.45e-08,3;UBERON:0002240,3.26e-08,3;UBERON:0005174,3.26e-08,3;UBERON:0001137,3.26e-08,3;UBERON:0000988,1.22e-07,3;UBERON:0001896,1.43e-07,3;UBERON:0001870,1.43e-07,3;UBERON:0005290,1.43e-07,3;UBERON:0010096,1.43e-07,3;UBERON:0007846,3.62e-07,3;UBERON:0000043,3.62e-07,3;UBERON:0007845,3.62e-07,3;UBERON:0006947,4.22e-07,3;UBERON:0004054,4.22e-07,3;UBERON:0000922,4.25e-07,592;UBERON:0002050,6.60e-07,564 | |||
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| ||
|short_description=p10@LINC00478 | |||
}} | }} |
Latest revision as of 19:26, 17 September 2015
Short description: | p10@LINC00478 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_LINC00478_5end |
Coexpression cluster: | C334_cerebellum_pineal_occipital_pituitary_amygdala_medial_caudate |
Association with transcript: | 37bp_to_, -37bp_to_ENST00000400178, ENST00000456342, uc010glc.2_5end |
EntrezGene: | LINC00478 |
HGNC: | 1274 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 3.62e-07 | 3 |
tendon cell | 3.62e-07 | 3 |