FFCP PHASE1:Hg19::chr15:45028520..45028556,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=140691 | |EntrezGene=140691 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17857 | |HGNC=17857 | ||
|TSSclassifier=strong | |||
|UniProt=Q86WT6 | |UniProt=Q86WT6 | ||
|association_with_transcript=0bp_to_uc001zug.1,uc001zuh.1,uc001zui.1,uc010bdy.1_5end | |association_with_transcript=0bp_to_uc001zug.1,uc001zuh.1,uc001zui.1,uc010bdy.1_5end | ||
|cluster_id=chr15:45028520..45028556,+ | |||
|coexpression_cluster_id=C3491 | |coexpression_cluster_id=C3491 | ||
|description=CAGE_peak_9_at_TRIM69_5end | |description=CAGE_peak_9_at_TRIM69_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002087!6.58e-41!119;CL:0000738!1.09e-38!140;CL:0002031!4.89e-34!124;CL:0000542!1.17e-29!53;CL:0000051!1.17e-29!53;CL:0000037!3.20e-29!172;CL:0000566!3.20e-29!172;CL:0000838!3.28e-28!52;CL:0002032!1.32e-27!165;CL:0000837!1.32e-27!165;CL:0000988!1.35e-26!182;CL:0000791!4.74e-24!18;CL:0000789!4.74e-24!18;CL:0002420!4.74e-24!18;CL:0002419!4.74e-24!18;CL:0000790!4.74e-24!18;CL:0000084!1.64e-20!25;CL:0000827!1.64e-20!25;CL:0002057!2.79e-18!42;CL:0000625!7.61e-17!11;CL:0000860!1.35e-16!45;CL:0002009!2.16e-11!65;CL:0002194!1.01e-10!63;CL:0000576!1.01e-10!63;CL:0000040!1.01e-10!63;CL:0000559!1.01e-10!63;CL:0000557!7.15e-10!71;CL:0000839!4.98e-09!70;CL:0000766!7.64e-08!76;CL:0000624!9.64e-08!6;CL:0000453!1.92e-07!5;CL:0000945!4.06e-07!24;CL:0000826!4.06e-07!24 | |ontology_enrichment_celltype=CL:0002087!6.58e-41!119;CL:0000738!1.09e-38!140;CL:0002031!4.89e-34!124;CL:0000542!1.17e-29!53;CL:0000051!1.17e-29!53;CL:0000037!3.20e-29!172;CL:0000566!3.20e-29!172;CL:0000838!3.28e-28!52;CL:0002032!1.32e-27!165;CL:0000837!1.32e-27!165;CL:0000988!1.35e-26!182;CL:0000791!4.74e-24!18;CL:0000789!4.74e-24!18;CL:0002420!4.74e-24!18;CL:0002419!4.74e-24!18;CL:0000790!4.74e-24!18;CL:0000084!1.64e-20!25;CL:0000827!1.64e-20!25;CL:0002057!2.79e-18!42;CL:0000625!7.61e-17!11;CL:0000860!1.35e-16!45;CL:0002009!2.16e-11!65;CL:0002194!1.01e-10!63;CL:0000576!1.01e-10!63;CL:0000040!1.01e-10!63;CL:0000559!1.01e-10!63;CL:0000557!7.15e-10!71;CL:0000839!4.98e-09!70;CL:0000766!7.64e-08!76;CL:0000624!9.64e-08!6;CL:0000453!1.92e-07!5;CL:0000945!4.06e-07!24;CL:0000826!4.06e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000453;8.58e-25;5!CL:0000791;1.40e-24;18!CL:0000789;1.40e-24;18!CL:0002419;1.40e-24;18!CL:0000625;3.75e-23;11!CL:0000084;4.56e-22;25!CL:0000990;7.16e-14;8!CL:0000542;1.92e-12;53!CL:0000451;2.23e-11;10!CL:0000898;1.17e-10;3!CL:0000946;9.73e-09;1!CL:0000786;9.73e-09;1!CL:0000895;1.71e-08;1 | |ontology_enrichment_celltype_v019=CL:0000453;8.58e-25;5!CL:0000791;1.40e-24;18!CL:0000789;1.40e-24;18!CL:0002419;1.40e-24;18!CL:0000625;3.75e-23;11!CL:0000084;4.56e-22;25!CL:0000990;7.16e-14;8!CL:0000542;1.92e-12;53!CL:0000451;2.23e-11;10!CL:0000898;1.17e-10;3!CL:0000946;9.73e-09;1!CL:0000786;9.73e-09;1!CL:0000895;1.71e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000453,8.33e-25,5;CL:0000791,1.38e-24,18;CL:0000789,1.38e-24,18;CL:0002420,1.38e-24,18;CL:0002419,1.38e-24,18;CL:0000790,1.38e-24,18;CL:0000542,2.86e-24,53;CL:0000051,2.86e-24,53;CL:0000625,3.33e-23,11;CL:0000084,4.62e-22,25;CL:0000827,4.62e-22,25;CL:0000838,2.62e-21,52;CL:0000738,5.02e-14,136;CL:0000990,7.04e-14,8;CL:0000451,2.20e-11,10;CL:0002032,2.44e-11,161;CL:0000837,2.44e-11,161;CL:0000037,9.93e-11,168;CL:0000898,1.32e-10,3;CL:0000988,5.13e-10,177;CL:0002087,1.06e-09,115;CL:0002031,2.99e-09,120;CL:0000946,8.36e-09,1;CL:0000786,8.36e-09,1;CL:0000980,8.36e-09,1;CL:0000810,1.65e-08,1;CL:0000895,1.65e-08,1;CL:0002436,1.65e-08,1;CL:0002427,1.65e-08,1;CL:0002428,1.65e-08,1;CL:0002429,1.65e-08,1;CL:0002433,1.65e-08,1;CL:0002431,1.65e-08,1;CL:0002432,1.65e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000790;1.40e-24;18!CL:0000051;1.92e-12;53!CL:0002427;1.71e-08;1 | |ontology_enrichment_development_v019=CL:0000790;1.40e-24;18!CL:0000051;1.92e-12;53!CL:0002427;1.71e-08;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;5.08e-09;1!DOID:0050177;5.08e-09;1!DOID:0050427;5.08e-09;1!DOID:0060060;9.73e-09;1!DOID:0060061;9.73e-09;1!DOID:8691;9.73e-09;1!DOID:4960;1.71e-08;1!DOID:0070004;1.71e-08;1!DOID:12603;1.71e-08;1 | |ontology_enrichment_disease_v019=DOID:630;5.08e-09;1!DOID:0050177;5.08e-09;1!DOID:0050427;5.08e-09;1!DOID:0060060;9.73e-09;1!DOID:0060061;9.73e-09;1!DOID:8691;9.73e-09;1!DOID:4960;1.71e-08;1!DOID:0070004;1.71e-08;1!DOID:12603;1.71e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:630,4.52e-09,1;DOID:0050177,4.52e-09,1;DOID:0050427,4.52e-09,1;DOID:0060060,1.05e-08,1;DOID:0060061,1.05e-08,1;DOID:8691,1.05e-08,1;DOID:4960,1.78e-08,1;DOID:0070004,1.78e-08,1;DOID:12603,2.22e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.73e-14!102;UBERON:0003061!1.73e-14!102;UBERON:0002193!2.88e-14!112;UBERON:0002371!5.74e-09!80;UBERON:0002405!1.49e-08!115;UBERON:0001474!6.91e-08!86 | |ontology_enrichment_uberon=UBERON:0002390!1.73e-14!102;UBERON:0003061!1.73e-14!102;UBERON:0002193!2.88e-14!112;UBERON:0002371!5.74e-09!80;UBERON:0002405!1.49e-08!115;UBERON:0001474!6.91e-08!86 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0.314843125254717,0,0,0,0,0,0,0.0774672005803016,0,0,0.553995408531877,0.401088894940283,0.434021741431704,0.223915474239924,0,0,0.145398238779565,0,0.485168122375632,0.232429036905685,0,0.309706370895104,0.575384784644301,0.512321413058201,0.945928919554341,0,0,0,0.188242339542605,0,0.449446968890169,0.612167784741805,0.641858054152187,0.639337125799041,0.329851300186716,0.199463657621632,0.426224750532694,0.290209238628584,0,0,0,0.521482918420201,0.868755378820466,0,0.368277635987565,0.316462387440884,0,0,0.209658645508376,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0.661044872784862,0,0,0,0,0,0.560508562981536,0,0.196709770113833,0,0.411202997999018,3.34372990781356,0.32592226663359,0.473447805734733,0,10.4725829472063,2.06224135232386,3.32300841875432,2.16643091012012,9.47875765969996,9.10415432919148,0.822189523018381,0,0.289803085735052,0.296573126324121,0.535081656179426,0,4.53237370790265,1.53288197440768,0.68725489096526,0.759059076058509,2.54852331459277,1.95325036156926,2.85135613334512,0.451725357233318,1.27986611154418,1.24930726552346,0.947109008176067,1.64225599384209,0.80642697289893,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.394061520403854,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0,0,1.58625035258854,0,0,0,1.11481905075431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,4.30796819113743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0.51595809741485,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.59958226482401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0,0,0.496166021811951,2.96417447846916,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.26122833866349,4.51740457065435,6.54261577023377,0,0,0,2.39984875025916,0,1.37771983728653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,2.88084968889448,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.187967835959707,0.128915775947154,0.199882311849858,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0.267964130156178,0,0,0,0,0,0,0,0,0,0.435433495793923,0,0.740872583160463,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,4.80852738454849 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0.314843125254717,0,0,0,0,0,0,0.0774672005803016,0,0,0.553995408531877,0.401088894940283,0.434021741431704,0.223915474239924,0,0,0.145398238779565,0,0.485168122375632,0.232429036905685,0,0.309706370895104,0.575384784644301,0.512321413058201,0.945928919554341,0,0,0,0.188242339542605,0,0.449446968890169,0.612167784741805,0.641858054152187,0.639337125799041,0.329851300186716,0.199463657621632,0.426224750532694,0.290209238628584,0,0,0,0.521482918420201,0.868755378820466,0,0.368277635987565,0.316462387440884,0,0,0.209658645508376,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0.661044872784862,0,0,0,0,0,0.560508562981536,0,0.196709770113833,0,0.411202997999018,3.34372990781356,0.32592226663359,0.473447805734733,0,10.4725829472063,2.06224135232386,3.32300841875432,2.16643091012012,9.47875765969996,9.10415432919148,0.822189523018381,0,0.289803085735052,0.296573126324121,0.535081656179426,0,4.53237370790265,1.53288197440768,0.68725489096526,0.759059076058509,2.54852331459277,1.95325036156926,2.85135613334512,0.451725357233318,1.27986611154418,1.24930726552346,0.947109008176067,1.64225599384209,0.80642697289893,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.394061520403854,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0,0,1.58625035258854,0,0,0,1.11481905075431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,4.30796819113743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0.51595809741485,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.59958226482401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0,0,0.496166021811951,2.96417447846916,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.26122833866349,4.51740457065435,6.54261577023377,0,0,0,2.39984875025916,0,1.37771983728653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,2.88084968889448,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.187967835959707,0.128915775947154,0.199882311849858,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0.267964130156178,0,0,0,0,0,0,0,0,0,0.435433495793923,0,0.740872583160463,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,4.80852738454849 | ||
|short_description=p9@TRIM69 | |short_description=p9@TRIM69 | ||
}} | }} |
Latest revision as of 19:31, 17 September 2015
Short description: | p9@TRIM69 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TRIM69_5end |
Coexpression cluster: | C3491_migratory_CD4_splenic_immature_xeroderma_b_lymphangiectasia |
Association with transcript: | 0bp_to_uc001zug.1, uc001zuh.1, uc001zui.1, uc010bdy.1_5end |
EntrezGene: | TRIM69 |
HGNC: | 17857 |
UniProt: | Q86WT6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
genetic disease | 4.52e-09 | 1 |
monogenic disease | 4.52e-09 | 1 |
xeroderma pigmentosum | 4.52e-09 | 1 |
non-Hodgkin lymphoma | 1.05e-08 | 1 |
cutaneous T cell lymphoma | 1.05e-08 | 1 |
mycosis fungoides | 1.05e-08 | 1 |
bone marrow cancer | 1.78e-08 | 1 |
myeloma | 1.78e-08 | 1 |
acute leukemia | 2.22e-08 | 1 |