FFCP PHASE1:Hg19::chr1:3607228..3607250,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7161 | |EntrezGene=7161 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12003 | |HGNC=12003 | ||
|TSSclassifier=strong | |||
|UniProt=O15350 | |UniProt=O15350 | ||
|association_with_transcript=0bp_to_ENST00000378280,ENST00000378285,ENST00000378288,NM_001126240,NM_001126241,NM_001126242,NM_001204189,NM_001204190,NM_001204191,uc001akr.2,uc001aks.2,uc009vlk.1,uc010nzj.1_5end | |association_with_transcript=0bp_to_ENST00000378280,ENST00000378285,ENST00000378288,NM_001126240,NM_001126241,NM_001126242,NM_001204189,NM_001204190,NM_001204191,uc001akr.2,uc001aks.2,uc009vlk.1,uc010nzj.1_5end | ||
|cluster_id=chr1:3607228..3607250,+ | |||
|coexpression_cluster_id=C171 | |||
|description=CAGE_peak_8_at_TP73_5end | |description=CAGE_peak_8_at_TP73_5end | ||
|id=chr1:3607228..3607250,+ | |id=chr1:3607228..3607250,+ | ||
|ontology_enrichment_celltype=CL:0002623!7.98e-11!3 | |ontology_enrichment_celltype=CL:0002623!7.98e-11!3 | ||
|ontology_enrichment_celltype_v019=CL:0002623;2.24e-46;3!CL:0000622;3.66e-28;5!CL:0000154;1.34e-23;6!CL:0000150;5.71e-16;9!CL:0000123;3.43e-09;2!CL:0000242;3.43e-09;2!CL:0000575;6.93e-09;2!CL:0000095;6.78e-08;17!CL:0002251;1.66e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,1.65e-46,3;CL:0000622,3.04e-28,5;CL:0000154,1.15e-23,6;CL:0000150,5.16e-16,9;CL:0000242,3.43e-09,2;CL:0000575,6.94e-09,2;CL:0000095,6.94e-08,17;CL:0000123,6.94e-08,17;CL:0002251,1.59e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0007297;6.93e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003408!4.34e-11!10;UBERON:0001896!5.00e-10!3;UBERON:0005290!5.00e-10!3;UBERON:0010096!5.00e-10!3;UBERON:0000153!8.85e-10!129;UBERON:0007811!8.85e-10!129;UBERON:0000924!1.79e-09!173;UBERON:0006601!1.79e-09!173;UBERON:0002298!3.29e-09!8;UBERON:0001044!4.35e-09!6;UBERON:0003293!4.35e-09!6;UBERON:0003294!4.35e-09!6;UBERON:0010047!4.35e-09!6;UBERON:0000167!4.35e-09!6;UBERON:0004121!5.57e-09!169;UBERON:0000166!2.88e-08!21;UBERON:0001004!6.74e-08!72;UBERON:0000033!8.69e-08!123;UBERON:0000165!1.91e-07!28;UBERON:0000930!1.91e-07!28;UBERON:0000974!2.02e-07!10;UBERON:0003127!3.44e-07!2;UBERON:0007023!9.10e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;1.34e-23;6!UBERON:0003293;1.34e-23;6!UBERON:0003294;1.34e-23;6!UBERON:0010047;1.34e-23;6!UBERON:0003408;1.34e-23;6!UBERON:0000167;1.34e-23;6!UBERON:0001301;1.93e-16;1!UBERON:0001041;1.73e-10;14!UBERON:0000161;7.11e-08;19!UBERON:0000166;7.11e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,1.15e-23,6;UBERON:0003293,1.15e-23,6;UBERON:0003294,1.15e-23,6;UBERON:0010047,1.15e-23,6;UBERON:0000167,1.15e-23,6;UBERON:0001301,2.63e-16,1;UBERON:0003408,1.77e-14,10;UBERON:0000166,6.89e-07,22 | |||
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| ||
|short_description=p8@TP73 | |short_description=p8@TP73 | ||
}} | }} |
Latest revision as of 19:31, 17 September 2015
Short description: | p8@TP73 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TP73_5end |
Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
Association with transcript: | 0bp_to_ENST00000378280, ENST00000378285, ENST00000378288, NM_001126240, NM_001126241, NM_001126242, NM_001204189, NM_001204190, NM_001204191, uc001akr.2, uc001aks.2, uc009vlk.1, uc010nzj.1_5end |
EntrezGene: | TP73 |
HGNC: | 12003 |
UniProt: | O15350 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 1.65e-46 | 3 |
acinar cell | 3.04e-28 | 5 |
protein secreting cell | 1.15e-23 | 6 |
glandular epithelial cell | 5.16e-16 | 9 |
Merkel cell | 3.43e-09 | 2 |
corneal epithelial cell | 6.94e-09 | 2 |
neuron associated cell | 6.94e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 6.94e-08 | 17 |
epithelial cell of alimentary canal | 1.59e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 1.15e-23 | 6 |
gland of oral region | 1.15e-23 | 6 |
gland of foregut | 1.15e-23 | 6 |
oral gland | 1.15e-23 | 6 |
oral cavity | 1.15e-23 | 6 |
epididymis | 2.63e-16 | 1 |
gland of gut | 1.77e-14 | 10 |
oral opening | 6.89e-07 | 22 |