FFCP PHASE1:Hg19::chr15:45028719..45028738,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=140691 | |EntrezGene=140691 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17857 | |HGNC=17857 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000558329,ENST00000560442,ENST00000561043_5end | |association_with_transcript=0bp_to_ENST00000558329,ENST00000560442,ENST00000561043_5end | ||
|cluster_id=chr15:45028719..45028738,+ | |||
|coexpression_cluster_id=C189 | |||
|description=CAGE_peak_6_at_TRIM69_5end | |description=CAGE_peak_6_at_TRIM69_5end | ||
|id=chr15:45028719..45028738,+ | |id=chr15:45028719..45028738,+ | ||
|ontology_enrichment_celltype=CL:0000542!2.20e-43!53;CL:0000051!2.20e-43!53;CL:0000838!1.41e-41!52;CL:0000945!5.71e-24!24;CL:0000826!5.71e-24!24;CL:0000738!2.05e-21!140;CL:0002087!3.77e-20!119;CL:0000791!1.67e-18!18;CL:0000789!1.67e-18!18;CL:0002420!1.67e-18!18;CL:0002419!1.67e-18!18;CL:0000790!1.67e-18!18;CL:0002031!8.30e-18!124;CL:0000084!1.07e-16!25;CL:0000827!1.07e-16!25;CL:0000625!1.88e-15!11;CL:0002032!2.21e-15!165;CL:0000837!2.21e-15!165;CL:0000037!3.87e-15!172;CL:0000566!3.87e-15!172;CL:0000988!1.19e-13!182;CL:0000236!3.97e-12!14;CL:0000453!2.71e-08!5 | |ontology_enrichment_celltype=CL:0000542!2.20e-43!53;CL:0000051!2.20e-43!53;CL:0000838!1.41e-41!52;CL:0000945!5.71e-24!24;CL:0000826!5.71e-24!24;CL:0000738!2.05e-21!140;CL:0002087!3.77e-20!119;CL:0000791!1.67e-18!18;CL:0000789!1.67e-18!18;CL:0002420!1.67e-18!18;CL:0002419!1.67e-18!18;CL:0000790!1.67e-18!18;CL:0002031!8.30e-18!124;CL:0000084!1.07e-16!25;CL:0000827!1.07e-16!25;CL:0000625!1.88e-15!11;CL:0002032!2.21e-15!165;CL:0000837!2.21e-15!165;CL:0000037!3.87e-15!172;CL:0000566!3.87e-15!172;CL:0000988!1.19e-13!182;CL:0000236!3.97e-12!14;CL:0000453!2.71e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000453;1.12e-23;5!CL:0000945;2.07e-14;24!CL:0000990;2.91e-13;8!CL:0000451;6.95e-11;10!CL:0000946;1.01e-08;1!CL:0000786;1.01e-08;1!CL:0000542;2.99e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.16e-23,5;CL:0000838,3.59e-15,52;CL:0000542,7.53e-15,53;CL:0000051,7.53e-15,53;CL:0000945,2.00e-14,24;CL:0000826,2.00e-14,24;CL:0000990,2.96e-13,8;CL:0000451,7.04e-11,10;CL:0000738,3.19e-09,136;CL:0000946,1.05e-08,1;CL:0000786,1.05e-08,1;CL:0000980,1.05e-08,1;CL:0002032,2.25e-07,161;CL:0000837,2.25e-07,161;CL:0000037,5.89e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000051;2.99e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;4.70e-09;1!DOID:0050177;4.70e-09;1!DOID:0050427;4.70e-09;1!DOID:4960;1.65e-08;1!DOID:0070004;1.65e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,4.52e-09,1;DOID:0050177,4.52e-09,1;DOID:0050427,4.52e-09,1;DOID:4960,2.06e-08,1;DOID:0070004,2.06e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p6@TRIM69 | |short_description=p6@TRIM69 | ||
}} | }} |
Latest revision as of 19:33, 17 September 2015
Short description: | p6@TRIM69 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TRIM69_5end |
Coexpression cluster: | C189_b_splenic_tonsil_CD19_lymph_appendix_spleen |
Association with transcript: | 0bp_to_ENST00000558329, ENST00000560442, ENST00000561043_5end |
EntrezGene: | TRIM69 |
HGNC: | 17857 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 1.16e-23 | 5 |
lymphoid lineage restricted progenitor cell | 3.59e-15 | 52 |
lymphocyte | 7.53e-15 | 53 |
common lymphoid progenitor | 7.53e-15 | 53 |
lymphocyte of B lineage | 2.00e-14 | 24 |
pro-B cell | 2.00e-14 | 24 |
conventional dendritic cell | 2.96e-13 | 8 |
dendritic cell | 7.04e-11 | 10 |
leukocyte | 3.19e-09 | 136 |
antibody secreting cell | 1.05e-08 | 1 |
plasma cell | 1.05e-08 | 1 |
plasmablast | 1.05e-08 | 1 |
hematopoietic oligopotent progenitor cell | 2.25e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.25e-07 | 161 |
hematopoietic stem cell | 5.89e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 4.52e-09 | 1 |
monogenic disease | 4.52e-09 | 1 |
xeroderma pigmentosum | 4.52e-09 | 1 |
bone marrow cancer | 2.06e-08 | 1 |
myeloma | 2.06e-08 | 1 |