FFCP PHASE1:Hg19::chr1:3607281..3607291,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7161 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12003 | |||
|TSSclassifier=strong | |||
|UniProt=O15350 | |||
|association_with_transcript=45bp_to_ENST00000378280,ENST00000378285,ENST00000378288,NM_001126240,NM_001126241,NM_001126242,NM_001204189,NM_001204190,NM_001204191,uc001akr.2,uc001aks.2,uc009vlk.1,uc010nzj.1_5end | |||
|cluster_id=chr1:3607281..3607291,+ | |||
|coexpression_cluster_id=C171 | |||
|description=CAGE_peak_13_at_TP73_5end | |||
|id=chr1:3607281..3607291,+ | |||
|ontology_enrichment_celltype=CL:0002623!1.52e-17!3;CL:0000622!9.79e-11!5;CL:0000154!5.04e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0000123;2.74e-50;2!CL:0000242;2.74e-50;2!CL:0000312;4.21e-21;5!CL:0000240;7.67e-18;6!CL:0000311;7.67e-18;6!CL:0000079;7.67e-18;6!CL:0000237;7.67e-18;6!CL:0000362;2.19e-12;9!CL:0002159;1.86e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.74e-50,2;CL:0000312,4.21e-21,5;CL:0000240,7.67e-18,6;CL:0000311,7.67e-18,6;CL:0000079,7.67e-18,6;CL:0000237,7.67e-18,6;CL:0000036,7.67e-18,6;CL:0000357,7.67e-18,6;CL:0000114,7.67e-18,6;CL:0000362,2.19e-12,9;CL:0002159,1.86e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000357;7.67e-18;6!CL:0000114;7.67e-18;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002298!1.12e-24!8;UBERON:0001896!6.50e-18!3;UBERON:0005290!6.50e-18!3;UBERON:0010096!6.50e-18!3;UBERON:0000988!6.16e-17!3;UBERON:0007023!6.22e-17!115;UBERON:0004733!2.78e-16!12;UBERON:0002028!2.78e-16!12;UBERON:0007277!2.78e-16!12;UBERON:0001044!2.08e-15!6;UBERON:0003293!2.08e-15!6;UBERON:0003294!2.08e-15!6;UBERON:0010047!2.08e-15!6;UBERON:0000167!2.08e-15!6;UBERON:0004732!5.46e-15!13;UBERON:0003408!7.60e-14!10;UBERON:0003076!6.44e-13!15;UBERON:0003057!6.44e-13!15;UBERON:0000153!1.29e-12!129;UBERON:0007811!1.29e-12!129;UBERON:0000955!2.01e-12!69;UBERON:0006238!2.01e-12!69;UBERON:0002148!4.64e-12!2;UBERON:0009662!4.64e-12!2;UBERON:0000033!5.82e-12!123;UBERON:0001049!1.97e-11!57;UBERON:0005068!1.97e-11!57;UBERON:0006241!1.97e-11!57;UBERON:0007135!1.97e-11!57;UBERON:0002616!5.67e-11!59;UBERON:0001017!4.61e-10!82;UBERON:0002308!5.19e-10!9;UBERON:0000125!5.19e-10!9;UBERON:0000924!1.61e-09!173;UBERON:0006601!1.61e-09!173;UBERON:0005743!1.77e-09!86;UBERON:0004121!1.08e-08!169;UBERON:0000073!2.42e-08!94;UBERON:0001016!2.42e-08!94;UBERON:0006331!2.51e-08!3;UBERON:0002346!9.49e-08!90;UBERON:0001301!2.50e-07!1;UBERON:0001831!3.36e-07!1;UBERON:0001567!3.36e-07!1;UBERON:0008801!3.36e-07!1;UBERON:0002336!4.51e-07!1;UBERON:0001018!4.51e-07!1;UBERON:0002473!4.51e-07!1;UBERON:0005340!4.51e-07!1;UBERON:0002316!4.51e-07!1;UBERON:0003544!4.51e-07!1;UBERON:0001020!4.51e-07!1;UBERON:0005970!4.51e-07!1;UBERON:0002437!4.51e-07!1;UBERON:0003075!7.23e-07!86;UBERON:0007284!7.23e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;5.55e-08;15!UBERON:0007376;5.55e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,5.55e-08,15;UBERON:0007376,5.55e-08,15;UBERON:0007383,5.55e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.482385754501632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0.404406797884062,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0.533937062838473,1.57204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.332787154610557,0.372578417648301,0,0.249960815924213,0,0,0,0,7.24605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0.703484977438482,0,0,0,0,0.227662191351298,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0.932388670104793,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p13@TP73 | |||
}} |
Latest revision as of 19:34, 17 September 2015
Short description: | p13@TP73 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_TP73_5end |
Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
Association with transcript: | 45bp_to_ENST00000378280, ENST00000378285, ENST00000378288, NM_001126240, NM_001126241, NM_001126242, NM_001204189, NM_001204190, NM_001204191, uc001akr.2, uc001aks.2, uc009vlk.1, uc010nzj.1_5end |
EntrezGene: | TP73 |
HGNC: | 12003 |
UniProt: | O15350 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.74e-50 | 2 |
keratinocyte | 4.21e-21 | 5 |
stratified squamous epithelial cell | 7.67e-18 | 6 |
keratin accumulating cell | 7.67e-18 | 6 |
stratified epithelial cell | 7.67e-18 | 6 |
keratinizing barrier epithelial cell | 7.67e-18 | 6 |
epithelial fate stem cell | 7.67e-18 | 6 |
stratified epithelial stem cell | 7.67e-18 | 6 |
surface ectodermal cell | 7.67e-18 | 6 |
epidermal cell | 2.19e-12 | 9 |
general ecto-epithelial cell | 1.86e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 5.55e-08 | 15 |
outer epithelium | 5.55e-08 | 15 |
enveloping layer of ectoderm | 5.55e-08 | 15 |