FFCP PHASE1:Hg19::chr4:41540273..41540283,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22998 | |EntrezGene=22998 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29191 | |HGNC=29191 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=82bp_to_ENST00000511496,uc003gvz.3,uc003gwa.3_5end | |association_with_transcript=82bp_to_ENST00000511496,uc003gvz.3,uc003gwa.3_5end | ||
|cluster_id=chr4:41540273..41540283,+ | |||
|coexpression_cluster_id=C2792 | |coexpression_cluster_id=C2792 | ||
|description=CAGE_peak_17_at_LIMCH1_5end | |description=CAGE_peak_17_at_LIMCH1_5end | ||
|id=chr4:41540273..41540283,+ | |id=chr4:41540273..41540283,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000077;4.42e-10;19!CL:0002580;3.01e-08;3!CL:0002334;1.79e-07;12!CL:0000319;2.09e-07;1!CL:0002581;8.47e-07;1!CL:0002616;8.47e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,3.69e-10,19;CL:0002580,6.04e-08,3;CL:0000319,2.09e-07,1;CL:0002334,2.87e-07,12;CL:0002616,5.06e-07,1;CL:0002581,7.15e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.23e-17;29!UBERON:0010226;8.47e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3030;2.09e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,2.09e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.84e-24!115;UBERON:0001737!2.18e-17!9;UBERON:0001557!1.42e-12!19;UBERON:0000064!3.36e-12!219;UBERON:0004457!2.79e-09!12;UBERON:0000042!2.79e-09!12;UBERON:0008947!4.10e-08!38;UBERON:0003258!4.10e-08!38;UBERON:0003688!6.04e-08!6;UBERON:0002358!6.04e-08!6;UBERON:0003684!6.04e-08!6;UBERON:0001178!6.04e-08!6;UBERON:0000065!2.57e-07!53;UBERON:0000063!3.14e-07!97;UBERON:0002298!9.49e-07!8 | |ontology_enrichment_uberon=UBERON:0007023!5.84e-24!115;UBERON:0001737!2.18e-17!9;UBERON:0001557!1.42e-12!19;UBERON:0000064!3.36e-12!219;UBERON:0004457!2.79e-09!12;UBERON:0000042!2.79e-09!12;UBERON:0008947!4.10e-08!38;UBERON:0003258!4.10e-08!38;UBERON:0003688!6.04e-08!6;UBERON:0002358!6.04e-08!6;UBERON:0003684!6.04e-08!6;UBERON:0001178!6.04e-08!6;UBERON:0000065!2.57e-07!53;UBERON:0000063!3.14e-07!97;UBERON:0002298!9.49e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.70e-29;9!UBERON:0001557;1.70e-29;9!UBERON:0005406;6.12e-12;2!UBERON:0000065;4.95e-11;44!UBERON:0002106;7.19e-09;3!UBERON:0001443;2.81e-08;11!UBERON:0000072;1.33e-07;37!UBERON:0002171;2.35e-07;1!UBERON:0006518;2.35e-07;1!UBERON:0008949;2.35e-07;1!UBERON:0000101;2.35e-07;1!UBERON:0002167;2.35e-07;1!UBERON:0002426;3.36e-07;1!UBERON:0003831;3.36e-07;1!UBERON:0003898;3.36e-07;1!UBERON:0004830;3.36e-07;1!UBERON:0003830;3.36e-07;1!UBERON:0005175;3.36e-07;1!UBERON:0001774;3.36e-07;1!UBERON:0001103;3.36e-07;1!UBERON:0001004;4.40e-07;65!UBERON:0002084;8.47e-07;1!UBERON:0002135;8.47e-07;1!UBERON:0002082;8.47e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.64e-29,9;UBERON:0001557,1.66e-17,19;UBERON:0008947,5.05e-13,38;UBERON:0003258,5.05e-13,38;UBERON:0005406,3.13e-12,2;UBERON:0000065,1.81e-10,54;UBERON:0002106,7.21e-09,3;UBERON:0004854,7.21e-09,3;UBERON:0009034,7.21e-09,3;UBERON:0002095,7.21e-09,3;UBERON:0004782,7.21e-09,3;UBERON:0003281,7.21e-09,3;UBERON:0009664,7.21e-09,3;UBERON:0002296,7.21e-09,3;UBERON:0005602,7.21e-09,3;UBERON:0001179,7.21e-09,3;UBERON:0006293,7.21e-09,3;UBERON:0001004,1.39e-08,74;UBERON:0001041,2.49e-08,87;UBERON:0001443,3.76e-08,11;UBERON:0000072,4.82e-08,47;UBERON:0004457,9.02e-08,12;UBERON:0000042,9.02e-08,12;UBERON:0002171,2.36e-07,1;UBERON:0006518,2.36e-07,1;UBERON:0008949,2.36e-07,1;UBERON:0000101,2.36e-07,1;UBERON:0002167,2.36e-07,1;UBERON:0002426,2.82e-07,1;UBERON:0003831,2.82e-07,1;UBERON:0003898,2.82e-07,1;UBERON:0004830,2.82e-07,1;UBERON:0003830,2.82e-07,1;UBERON:0005175,2.82e-07,1;UBERON:0001774,2.82e-07,1;UBERON:0001103,2.82e-07,1;UBERON:0010084,2.82e-07,1;UBERON:0002084,4.51e-07,1;UBERON:0002082,4.51e-07,1;UBERON:0010226,4.51e-07,1;UBERON:0002135,9.51e-07,1 | |||
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|phase1_expression=1.45342703416445,0.642301571672949,0.563817616383885,2.00146596706261,0.446961094427288,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5905718941022,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0.292311015483596,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77460200059766,1.34867752062481,0.964044119533928,2.20587945464788,2.17879444092406,1.42362371466658,0.943819157121151,1.56977172100277,1.15424147083917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,1.07423381301644,1.12264037773229,0,1.02341449813341,0.64341568457443,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,1.4245125703478,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,1.19832309870889,0,0.0769502585037971,0.569710279235006,0,0,0,0,0,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0,2.40773294189637,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0.451961481561065,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,2.36079817574322,0,0.135904206073614,0.104602846312333,0,0,0,0.273810757783986,0,0,0,1.39641200636127,0.458320848023367,0.717873024576814,0,1.28767814440971,0,0.604651252380536,0.720599767084807,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,1.98627591109629,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.26446520348538,0,0,0.854299300541557,3.77290332239198,3.72815149812476,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0.260994291965212,0,0,1.46842022703881,0.537266523244462,1.54400723580486,1.53498834705095,0,1.3503982678964,2.19625172848994,0,0,2.73473960559644,0.276516872303462,0,0,0,0,7.6189601713653,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0.41023272848151,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0.49131575253029,0,0,0,0,0,0,0,0.496211178389294,0,0,0.535701835878287,0,0,0,0.177404740325278,0,0,0.135939465953663,0.0657727735628491,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.615976841137482,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,2.34959794949634,3.41626806259959,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0.227336094654718,0,0,0.20686599172379,1.70587185520785,0.23806443146374,0,0,0,0.0636471582781649,0,1.30630048738177,0.684466602170562,0.202056159043763,0.215166616178029,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p17@LIMCH1 | |short_description=p17@LIMCH1 | ||
}} | }} |
Latest revision as of 19:39, 17 September 2015
Short description: | p17@LIMCH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_LIMCH1_5end |
Coexpression cluster: | C2792_lung_Preadipocyte_Adipocyte_mesothelioma_spleen_mucinous_skeletal |
Association with transcript: | 82bp_to_ENST00000511496, uc003gvz.3, uc003gwa.3_5end |
EntrezGene: | LIMCH1 |
HGNC: | 29191 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 3.69e-10 | 19 |
preadipocyte of the breast | 6.04e-08 | 3 |
mucus secreting cell | 2.09e-07 | 1 |
preadipocyte | 2.87e-07 | 12 |
perirenal adipocyte cell | 5.06e-07 | 1 |
perirenal preadipocyte | 7.15e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 2.09e-07 | 1 |