FFCP PHASE1:Hg19::chr4:41540314..41540341,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22998 | |EntrezGene=22998 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29191 | |HGNC=29191 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=123bp_to_ENST00000511496,uc003gvz.3,uc003gwa.3_5end | |association_with_transcript=123bp_to_ENST00000511496,uc003gvz.3,uc003gwa.3_5end | ||
|cluster_id=chr4:41540314..41540341,+ | |||
|coexpression_cluster_id=C2793 | |||
|description=CAGE_peak_6_at_LIMCH1_5end | |description=CAGE_peak_6_at_LIMCH1_5end | ||
|id=chr4:41540314..41540341,+ | |id=chr4:41540314..41540341,+ | ||
|ontology_enrichment_celltype=CL:0000077!9.58e-11!19 | |ontology_enrichment_celltype=CL:0000077!9.58e-11!19 | ||
|ontology_enrichment_celltype_v019=CL:0000077;2.41e-12;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,2.23e-12,19;CL:0000136,8.68e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.55e-12;29 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.87e-33!115;UBERON:0000064!7.40e-13!219;UBERON:0001049!2.63e-12!57;UBERON:0005068!2.63e-12!57;UBERON:0006241!2.63e-12!57;UBERON:0007135!2.63e-12!57;UBERON:0003075!5.19e-10!86;UBERON:0007284!5.19e-10!86;UBERON:0002780!3.08e-09!41;UBERON:0001890!3.08e-09!41;UBERON:0006240!3.08e-09!41;UBERON:0000477!3.77e-09!286;UBERON:0001737!5.03e-09!9;UBERON:0002616!6.17e-09!59;UBERON:0002346!6.28e-09!90;UBERON:0003080!8.26e-09!42;UBERON:0001557!1.68e-08!19;UBERON:0000955!2.51e-08!69;UBERON:0006238!2.51e-08!69;UBERON:0001017!4.73e-08!82;UBERON:0002020!5.57e-08!34;UBERON:0003528!5.57e-08!34;UBERON:0005743!1.08e-07!86;UBERON:0001893!1.12e-07!34;UBERON:0000475!2.13e-07!365;UBERON:0002791!2.59e-07!33;UBERON:0001869!4.33e-07!32;UBERON:0004457!5.58e-07!12;UBERON:0000042!5.58e-07!12;UBERON:0000073!9.69e-07!94;UBERON:0001016!9.69e-07!94 | |ontology_enrichment_uberon=UBERON:0007023!2.87e-33!115;UBERON:0000064!7.40e-13!219;UBERON:0001049!2.63e-12!57;UBERON:0005068!2.63e-12!57;UBERON:0006241!2.63e-12!57;UBERON:0007135!2.63e-12!57;UBERON:0003075!5.19e-10!86;UBERON:0007284!5.19e-10!86;UBERON:0002780!3.08e-09!41;UBERON:0001890!3.08e-09!41;UBERON:0006240!3.08e-09!41;UBERON:0000477!3.77e-09!286;UBERON:0001737!5.03e-09!9;UBERON:0002616!6.17e-09!59;UBERON:0002346!6.28e-09!90;UBERON:0003080!8.26e-09!42;UBERON:0001557!1.68e-08!19;UBERON:0000955!2.51e-08!69;UBERON:0006238!2.51e-08!69;UBERON:0001017!4.73e-08!82;UBERON:0002020!5.57e-08!34;UBERON:0003528!5.57e-08!34;UBERON:0005743!1.08e-07!86;UBERON:0001893!1.12e-07!34;UBERON:0000475!2.13e-07!365;UBERON:0002791!2.59e-07!33;UBERON:0001869!4.33e-07!32;UBERON:0004457!5.58e-07!12;UBERON:0000042!5.58e-07!12;UBERON:0000073!9.69e-07!94;UBERON:0001016!9.69e-07!94 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.52e-14;9!UBERON:0001557;1.52e-14;9!UBERON:0003688;1.82e-09;6!UBERON:0002358;1.82e-09;6!UBERON:0003684;1.82e-09;6!UBERON:0001178;1.82e-09;6!UBERON:0002298;5.80e-08;6!UBERON:0004457;7.55e-08;9!UBERON:0000042;7.55e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.44e-14,9;UBERON:0007023,1.52e-12,114;UBERON:0001557,7.03e-11,19;UBERON:0004457,7.89e-10,12;UBERON:0000042,7.89e-10,12;UBERON:0003688,1.58e-09,6;UBERON:0002358,1.58e-09,6;UBERON:0003684,1.58e-09,6;UBERON:0001178,1.58e-09,6;UBERON:0008947,1.80e-08,38;UBERON:0003258,1.80e-08,38;UBERON:0002298,5.91e-08,6;UBERON:0000065,2.68e-07,54 | |||
|phase1_expression=4.36028110249336,2.99740733447376,3.24195129420734,11.0080628188443,1.78784437770915,9.59572376510406,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,1.00267582127178,0.144846518960824,0.795285947051099,2.43317435151318,0,0,0,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0.516833518338658,0.35576626268671,0.66944122552934,0.402829317109147,0.760272105718513,1.70843440283719,0,0,0.267899184852239,0,0.112611480483322,0,0,0,0,0,0,1.49091585508596,0.12663051166458,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0.640672166455702,0,0,0.103052529238439,0.772921620136887,0.18611685633159,2.36286865137773,6.13853132515551,0.252433774244115,0.368199594569197,0.161646056818812,0,0.705264687593482,0.169560592310488,0.386521706326594,0,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,5.67872640191251,8.26064981382698,5.54325368732009,7.61028411853518,6.75426276686459,5.93176547777742,5.52808363456674,7.2601942096378,5.00171304030308,0.738155454624648,0,0,0,0,0,1.77236972004421,0,0,0.343135620597051,0.109750285408626,0,0,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0.246217006087397,0,0,0,1.17587489739202,0.141775097242386,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0.868687840005475,0,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,8.43566546583841,15.4996593020943,3.64858122762996,5.25370511948374,5.11707249066703,2.41280881715411,10.3892646511494,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,3.60643540767028,0.27470839445503,0.330037999682352,0,0,0,0.096670718292122,0.308097234229289,0.767518373630648,0.413509717453592,0,0,1.02271952899321,10.861908348902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0.438450885253763,0,0,0.405820753925408,0,0.845086807596724,0,0,1.426684205925,0,1.05553817648832,0.987884678879706,0,0,0,0,0,4.42475863650862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4906390476222,0,0,0,1.67121139316383,0.296964680832639,0.614321404198464,0,0.422008249231538,0.445234820091624,0,0,6.37593562403423,0,0,0,0,0,0.269605053441981,0.358042349351218,0,0.789147245095469,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0.236387681767936,0,0,0,2.65722415744152,0.60298219312704,0,0.774054819518572,0.591095237907095,0.219385397153973,6.20949242058244,0,0.230850775511391,3.87402989879804,0,0,0,5.74202087517455,2.38153742844842,13.3258694004659,0,0,0,0,0,0,0,0,0,0,0,1.94749775767882,0,0.176915129006678,0,0,0,0,0.337005664903385,17.6567082405734,0.234264445725339,0,0,0,0.789168805698781,0,0,5.56041900730694,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,1.7472666824203,0,0,0,0,0.969890164884194,0,1.12990370390266,0.274083849293502,0,0.316553979779393,0,0,0.213452994739353,0.19980960958213,0,0,0,0,27.584062895526,1.41416420770077,6.25159347938625,5.33474516192899,0,0,1.20084057741958,0.684526894459965,0,6.0167161798794,0,10.3334488470734,20.8535985850632,7.89660327034495,9.98395002494956,22.7489805512383,24.1025174037222,15.5865656169205,1.80149941771202,0,0,0,0,0,0,0.795229689809303,0.544813624446302,0,0,0,0.2249738915515,0,0.485996453264197,0,1.49730843868477,0.681909645754975,0,1.43429871466276,5.18171032762502,22.8702504439477,24.497402903521,0,0,0,0,0,0,0,0,1.75862680413699,0,1.68067843270016,1.19009341568421,0.513260513652988,0.704815022316672,6.72760699176477,21.8513984088536,3.31391244277756,0,0,0,0.638341257770182,1.63205341010842,0.2506898940227,1.22538230705385,0,0,0,0.244052529803926,0.625954653532499,4.0138643698305,1.22021956690538,1.92498849118289,0,0,0,0,0,0,0,0,0,0,0,0.50313580350515,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,2.00013882331577,1.03018711554838,0,0,1.73357847366573,2.14441591374926,2.3489486276869,3.85400073370863,3.70435958918134,8.81052136223283,8.05899784866693,9.57284486199014,10.0870662806205,0.353378291891762,8.87404576046208,19.4283806751034,0.256241518587947,2.41801239211839,15.1929978088691,1.24432592536558,0,0,0,0.327609848846413,6.14432271884298,0,0,0,0,6.81019144280203,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.513833800771676,0,0.957803154342908,0.205116364240755,0,0.414943514785307,0.968853873791107,1.42769420259154,0.392590874004102,0,1.28400018965175,4.73655231216387,0,0,0,1.50420656698514,0,0.781514011233092,0,1.63771917510097,0,0.675375846183947,0.781078098613847,0.620060389503552,0.317079050969534,0.546974809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| ||
|short_description=p6@LIMCH1 | |short_description=p6@LIMCH1 | ||
}} | }} |
Latest revision as of 19:40, 17 September 2015
Short description: | p6@LIMCH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LIMCH1_5end |
Coexpression cluster: | C2793_spleen_left_giant_lung_tongue_heart_mesothelioma |
Association with transcript: | 123bp_to_ENST00000511496, uc003gvz.3, uc003gwa.3_5end |
EntrezGene: | LIMCH1 |
HGNC: | 29191 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 2.23e-12 | 19 |
fat cell | 8.68e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.44e-14 | 9 |
adult organism | 1.52e-12 | 114 |
upper respiratory tract | 7.03e-11 | 19 |
cavity lining | 7.89e-10 | 12 |
serous membrane | 7.89e-10 | 12 |
omentum | 1.58e-09 | 6 |
peritoneum | 1.58e-09 | 6 |
abdominal cavity | 1.58e-09 | 6 |
visceral peritoneum | 1.58e-09 | 6 |
respiratory primordium | 1.80e-08 | 38 |
endoderm of foregut | 1.80e-08 | 38 |
brainstem | 5.91e-08 | 6 |
respiratory tract | 2.68e-07 | 54 |