FFCP PHASE1:Hg19::chr4:41750839..41750850,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8929 | |EntrezGene=8929 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9143 | |HGNC=9143 | ||
|TSSclassifier=strong | |||
|UniProt=Q99453 | |UniProt=Q99453 | ||
|association_with_transcript=136bp_to_ENST00000226382,NM_003924,uc003gwf.3_5end | |||
|cluster_id=chr4:41750839..41750850,- | |||
|coexpression_cluster_id=C1368 | |||
|description=CAGE_peak_2_at_PHOX2B_5end | |||
|id=chr4:41750839..41750850,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;9.21e-54;5!CL:0002321;2.99e-18;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:169!4.78e-18!6;DOID:171!7.05e-11!10;DOID:3095!3.18e-07!22;DOID:2994!3.18e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:169;6.65e-45;6!DOID:171;3.72e-27;10!DOID:3095;1.47e-12;22!DOID:2994;1.47e-12;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,6.65e-45,6;DOID:171,3.72e-27,10;DOID:3095,1.47e-12,22;DOID:2994,1.47e-12,22 | |||
|ontology_enrichment_uberon=UBERON:0000013!1.28e-21!5;UBERON:0002410!1.28e-21!5;UBERON:0002298!1.15e-19!8;UBERON:0001896!1.88e-19!3;UBERON:0005290!1.88e-19!3;UBERON:0010096!1.88e-19!3;UBERON:0002148!7.14e-14!2;UBERON:0009662!7.14e-14!2;UBERON:0004733!4.69e-13!12;UBERON:0002028!4.69e-13!12;UBERON:0007277!4.69e-13!12;UBERON:0000010!4.47e-12!8;UBERON:0004732!4.91e-12!13;UBERON:0000160!2.07e-10!27;UBERON:0003076!2.11e-10!15;UBERON:0003057!2.11e-10!15;UBERON:0005409!2.90e-10!35;UBERON:0000059!1.45e-09!11;UBERON:0000988!1.53e-09!3;UBERON:0006331!1.53e-09!3;UBERON:0007023!8.93e-08!115;UBERON:0002135!1.39e-07!1;UBERON:0001154!1.48e-07!1;UBERON:0001153!1.48e-07!1;UBERON:0000073!3.17e-07!94;UBERON:0001016!3.17e-07!94;UBERON:0000063!4.09e-07!97;UBERON:0001155!6.57e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;9.21e-54;5!UBERON:0002410;9.21e-54;5!UBERON:0000010;4.06e-30;8!UBERON:0005409;6.51e-18;22!UBERON:0000160;5.49e-15;17!UBERON:0002108;4.69e-14;4!UBERON:0004921;1.95e-11;33!UBERON:0002148;1.86e-09;2!UBERON:0006331;1.86e-09;2!UBERON:0009662;1.86e-09;2!UBERON:0000922;1.92e-08;49!UBERON:0000059;5.47e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,9.21e-54,5;UBERON:0002410,9.21e-54,5;UBERON:0000010,4.06e-30,8;UBERON:0005409,7.58e-16,25;UBERON:0000160,5.49e-15,17;UBERON:0002108,4.69e-14,4;UBERON:0011216,1.33e-09,223;UBERON:0002148,1.71e-09,2;UBERON:0006331,1.71e-09,2;UBERON:0009662,1.71e-09,2;UBERON:0000059,5.47e-07,11;UBERON:0000988,9.64e-07,3 | |||
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|short_description=p2@PHOX2B | |||
}} | }} |
Latest revision as of 19:55, 17 September 2015
Short description: | p2@PHOX2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PHOX2B_5end |
Coexpression cluster: | C1368_neuroblastoma_rectum_small_colon_locus_duodenum_temporal |
Association with transcript: | 136bp_to_ENST00000226382, NM_003924, uc003gwf.3_5end |
EntrezGene: | PHOX2B |
HGNC: | 9143 |
UniProt: | Q99453 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 9.21e-54 | 5 |
autonomic nervous system | 9.21e-54 | 5 |
peripheral nervous system | 4.06e-30 | 8 |
gastrointestinal system | 7.58e-16 | 25 |
intestine | 5.49e-15 | 17 |
small intestine | 4.69e-14 | 4 |
organ system subdivision | 1.33e-09 | 223 |
locus ceruleus | 1.71e-09 | 2 |
brainstem nucleus | 1.71e-09 | 2 |
hindbrain nucleus | 1.71e-09 | 2 |
large intestine | 5.47e-07 | 11 |
pons | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 6.65e-45 | 6 |
neuroectodermal tumor | 3.72e-27 | 10 |
germ cell and embryonal cancer | 1.47e-12 | 22 |
germ cell cancer | 1.47e-12 | 22 |