FFCP PHASE1:Hg19::chr4:41750922..41750939,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8929 | |EntrezGene=8929 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9143 | |HGNC=9143 | ||
|TSSclassifier=strong | |||
|UniProt=Q99453 | |UniProt=Q99453 | ||
|association_with_transcript=47bp_to_ENST00000226382,NM_003924,uc003gwf.3_5end | |association_with_transcript=47bp_to_ENST00000226382,NM_003924,uc003gwf.3_5end | ||
|cluster_id=chr4:41750922..41750939,- | |||
|coexpression_cluster_id=C1368 | |||
|description=CAGE_peak_4_at_PHOX2B_5end | |description=CAGE_peak_4_at_PHOX2B_5end | ||
|id=chr4:41750922..41750939,- | |id=chr4:41750922..41750939,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;5.50e-64;5!CL:0002321;1.00e-21;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,7.99e-08,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:169!4.81e-21!6;DOID:171!1.06e-12!10 | |||
|ontology_enrichment_disease_v019=DOID:169;1.93e-53;6!DOID:171;2.56e-32;10!DOID:3095;5.87e-15;22!DOID:2994;5.87e-15;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.81e-53,6;DOID:171,2.46e-32,10;DOID:3095,5.77e-15,22;DOID:2994,5.77e-15,22 | |||
|ontology_enrichment_uberon=UBERON:0000013!3.34e-25!5;UBERON:0002410!3.34e-25!5;UBERON:0002148!7.88e-16!2;UBERON:0009662!7.88e-16!2;UBERON:0003127!2.41e-15!2;UBERON:0002298!6.21e-15!8;UBERON:0000010!4.28e-14!8;UBERON:0000988!7.30e-11!3;UBERON:0006331!7.30e-11!3;UBERON:0001896!1.08e-10!3;UBERON:0005290!1.08e-10!3;UBERON:0010096!1.08e-10!3;UBERON:0004733!5.13e-10!12;UBERON:0002028!5.13e-10!12;UBERON:0007277!5.13e-10!12;UBERON:0004732!2.95e-09!13;UBERON:0003076!4.86e-08!15;UBERON:0003057!4.86e-08!15;UBERON:0000073!1.81e-07!94;UBERON:0001016!1.81e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;5.50e-64;5!UBERON:0002410;5.50e-64;5!UBERON:0000010;7.65e-36;8!UBERON:0002108;1.21e-16;4!UBERON:0000160;1.69e-10;17!UBERON:0005409;2.39e-08;22!UBERON:0002114;7.50e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,5.07e-64,5;UBERON:0002410,5.07e-64,5;UBERON:0000010,7.32e-36,8;UBERON:0002108,1.12e-16,4;UBERON:0000160,1.67e-10,17;UBERON:0002114,7.76e-08,2;UBERON:0005409,1.87e-07,25 | |||
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|short_description=p4@PHOX2B | |short_description=p4@PHOX2B | ||
}} | }} |
Latest revision as of 19:57, 17 September 2015
Short description: | p4@PHOX2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PHOX2B_5end |
Coexpression cluster: | C1368_neuroblastoma_rectum_small_colon_locus_duodenum_temporal |
Association with transcript: | 47bp_to_ENST00000226382, NM_003924, uc003gwf.3_5end |
EntrezGene: | PHOX2B |
HGNC: | 9143 |
UniProt: | Q99453 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 7.99e-08 | 41 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 5.07e-64 | 5 |
autonomic nervous system | 5.07e-64 | 5 |
peripheral nervous system | 7.32e-36 | 8 |
small intestine | 1.12e-16 | 4 |
intestine | 1.67e-10 | 17 |
duodenum | 7.76e-08 | 2 |
gastrointestinal system | 1.87e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.81e-53 | 6 |
neuroectodermal tumor | 2.46e-32 | 10 |
germ cell and embryonal cancer | 5.77e-15 | 22 |
germ cell cancer | 5.77e-15 | 22 |