FFCP PHASE1:Hg19::chr16:7382840..7382860,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54715 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18222 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NWB1,F8WAC5 | |||
|association_with_transcript=89bp_to_ENST00000311745,ENST00000340209,ENST00000352951,ENST00000355637,ENST00000436368,NM_145891,NM_145892,NM_145893,uc002cyw.2,uc002cyx.2,uc002cyy.2,uc010uyc.1_5end | |||
|cluster_id=chr16:7382840..7382860,+ | |||
|coexpression_cluster_id=C72 | |||
|description=CAGE_peak_3_at_RBFOX1_5end | |||
|id=chr16:7382840..7382860,+ | |||
|ontology_enrichment_celltype=CL:0000188!2.47e-16!9;CL:0000594!1.04e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000188;2.16e-24;9!CL:0000594;5.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,2.01e-24,9;CL:0000594,5.55e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.38e-11;4!UBERON:0007284;2.38e-11;4!UBERON:0006603;7.11e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;5.01e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.13e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.26e-32!115;UBERON:0001869!1.19e-13!32;UBERON:0001893!1.24e-12!34;UBERON:0002791!1.53e-11!33;UBERON:0001950!2.03e-11!20;UBERON:0002780!2.54e-11!41;UBERON:0001890!2.54e-11!41;UBERON:0006240!2.54e-11!41;UBERON:0002020!4.19e-11!34;UBERON:0003528!4.19e-11!34;UBERON:0003080!5.87e-11!42;UBERON:0001049!3.22e-10!57;UBERON:0005068!3.22e-10!57;UBERON:0006241!3.22e-10!57;UBERON:0007135!3.22e-10!57;UBERON:0002619!3.34e-10!22;UBERON:0002616!8.85e-10!59;UBERON:0000481!1.26e-09!347;UBERON:0003075!1.47e-09!86;UBERON:0007284!1.47e-09!86;UBERON:0002346!7.21e-09!90;UBERON:0000956!9.82e-09!25;UBERON:0000203!9.82e-09!25;UBERON:0000483!1.43e-08!309;UBERON:0000955!1.91e-08!69;UBERON:0006238!1.91e-08!69;UBERON:0000153!2.14e-08!129;UBERON:0007811!2.14e-08!129;UBERON:0004151!2.15e-08!3;UBERON:0000119!2.29e-08!312;UBERON:0003978!2.37e-08!3;UBERON:0009751!2.37e-08!3;UBERON:0000946!2.37e-08!3;UBERON:0002523!2.37e-08!3;UBERON:0005983!2.37e-08!3;UBERON:0002165!2.37e-08!3;UBERON:0002062!2.37e-08!3;UBERON:0007280!2.37e-08!3;UBERON:0000200!2.89e-08!6;UBERON:0005743!2.98e-08!86;UBERON:0001017!5.43e-08!82;UBERON:0003056!2.63e-07!61;UBERON:0001134!3.62e-07!61;UBERON:0002036!3.62e-07!61;UBERON:0003082!3.62e-07!61;UBERON:0000475!3.76e-07!365;UBERON:0004121!5.64e-07!169;UBERON:0000073!5.71e-07!94;UBERON:0001016!5.71e-07!94;UBERON:0000033!7.89e-07!123;UBERON:0002385!8.21e-07!63;UBERON:0001015!8.21e-07!63;UBERON:0000383!8.21e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;4.55e-34;16!UBERON:0002036;4.55e-34;16!UBERON:0002385;3.19e-16;31!UBERON:0001015;3.19e-16;31!UBERON:0000383;3.19e-16;31!UBERON:0004151;4.64e-15;3!UBERON:0003978;5.75e-15;3!UBERON:0000946;5.75e-15;3!UBERON:0007100;2.94e-14;25!UBERON:0005090;3.82e-11;2!UBERON:0001630;3.82e-11;2!UBERON:0000341;7.59e-11;2!UBERON:0002133;2.18e-10;2!UBERON:0002081;2.46e-10;2!UBERON:0003127;4.21e-10;2!UBERON:0001723;1.13e-07;3!UBERON:0001033;1.13e-07;3!UBERON:0000948;2.35e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,4.53e-15,3;UBERON:0003978,5.48e-15,3;UBERON:0009751,5.48e-15,3;UBERON:0000946,5.48e-15,3;UBERON:0002523,5.48e-15,3;UBERON:0005983,5.48e-15,3;UBERON:0002165,5.48e-15,3;UBERON:0002062,5.48e-15,3;UBERON:0007280,5.48e-15,3;UBERON:0007100,4.39e-13,27;UBERON:0007023,3.92e-12,114;UBERON:0005090,3.82e-11,2;UBERON:0001630,3.82e-11,2;UBERON:0000341,7.59e-11,2;UBERON:0003103,7.63e-11,68;UBERON:0002133,2.08e-10,2;UBERON:0002081,2.40e-10,2;UBERON:0010227,2.40e-10,2;UBERON:0003127,3.50e-10,2;UBERON:0001134,1.44e-08,62;UBERON:0002036,1.44e-08,62;UBERON:0003082,1.44e-08,62;UBERON:0002385,3.16e-08,64;UBERON:0001015,3.16e-08,64;UBERON:0000383,3.16e-08,64;UBERON:0001723,1.15e-07,3;UBERON:0001033,1.15e-07,3;UBERON:0010056,1.15e-07,3;UBERON:0002329,3.48e-07,71;UBERON:0003059,3.48e-07,71;UBERON:0007282,3.48e-07,71;UBERON:0004290,3.48e-07,71;UBERON:0009618,3.48e-07,71;UBERON:0003077,4.71e-07,72;UBERON:0007285,4.71e-07,72;UBERON:0007524,6.32e-07,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.579125226670317,0.61642896765115,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,13.7257369524342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,5.02687735119034,1.69453478826109,3.68408819342711,10.1999063638553,0.322260734604821,1.59518363305651,6.05109054654316,42.7353771104339,0,0,0,0,0,0,0,0,0,0,0,0,1.48863347743867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1090643697607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.278304294485554,0,0,0,0,0,0,0,1.37897349296586,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.1288823649394,0.702793337176017,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,4.36816670605075,0,0,0,0,1.74580229679155,0,1.80784592624426,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,15.360532069974,28.1867321534371,2.87149209830726,19.7682210494001,62.6670030279393,38.1623192225602,19.886307856071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,13.579211201094,53.6294495996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0,0.372578417648301,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0.754703705257725,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,1.20008329398946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0.317079050969534,0,0,26.2991924546326,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.197318320688547,0,0,0.313972371402056,0.314231179832004,0,0,0,0,0.643288897589907,0,0,2.78173235684127,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,148.261203716028,193.211402503457,60.3103504295864,8.74279787506451,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,4.12856355064087,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,41.3673924887903,14.0458014563607,0,0.186224142887574,0,0.763765899337979,2.82964064541507,43.9787830751862,42.4369293345748,2.42467390852515,1.86477734020959,9.64715033983439,0,0,0,0,11.7320471201727,0,0,0,1.20764276154616,0 | |||
|short_description=p3@RBFOX1 | |||
}} |
Latest revision as of 20:12, 17 September 2015
Short description: | p3@RBFOX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RBFOX1_5end |
Coexpression cluster: | C72_skeletal_tongue_throat_heart_diaphragm_penis_left |
Association with transcript: | 89bp_to_ENST00000311745, ENST00000340209, ENST00000352951, ENST00000355637, ENST00000436368, NM_145891, NM_145892, NM_145893, uc002cyw.2, uc002cyx.2, uc002cyy.2, uc010uyc.1_5end |
EntrezGene: | RBFOX1 |
HGNC: | 18222 |
UniProt: | Q9NWB1F8WAC5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 2.01e-24 | 9 |
skeletal muscle satellite cell | 5.55e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 4.53e-15 | 3 |
valve | 5.48e-15 | 3 |
cardiac mesenchyme | 5.48e-15 | 3 |
cardial valve | 5.48e-15 | 3 |
tunica intima | 5.48e-15 | 3 |
heart layer | 5.48e-15 | 3 |
endocardium | 5.48e-15 | 3 |
endocardial cushion | 5.48e-15 | 3 |
presumptive endocardium | 5.48e-15 | 3 |
primary circulatory organ | 4.39e-13 | 27 |
adult organism | 3.92e-12 | 114 |
muscle structure | 3.82e-11 | 2 |
muscle organ | 3.82e-11 | 2 |
throat | 7.59e-11 | 2 |
compound organ | 7.63e-11 | 68 |
atrioventricular valve | 2.08e-10 | 2 |
cardiac atrium | 2.40e-10 | 2 |
future cardiac atrium | 2.40e-10 | 2 |
open tracheal system trachea | 3.50e-10 | 2 |
skeletal muscle tissue | 1.44e-08 | 62 |
striated muscle tissue | 1.44e-08 | 62 |
myotome | 1.44e-08 | 62 |
muscle tissue | 3.16e-08 | 64 |
musculature | 3.16e-08 | 64 |
musculature of body | 3.16e-08 | 64 |
tongue | 1.15e-07 | 3 |
gustatory system | 1.15e-07 | 3 |
future tongue | 1.15e-07 | 3 |
somite | 3.48e-07 | 71 |
presomitic mesoderm | 3.48e-07 | 71 |
presumptive segmental plate | 3.48e-07 | 71 |
dermomyotome | 3.48e-07 | 71 |
trunk paraxial mesoderm | 3.48e-07 | 71 |
paraxial mesoderm | 4.71e-07 | 72 |
presumptive paraxial mesoderm | 4.71e-07 | 72 |
dense mesenchyme tissue | 6.32e-07 | 73 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.13e-11 | 2 |