FFCP PHASE1:Hg19::chr1:158259558..158259570,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:158259558..158259570,+
|short_description=p4@CD1C
|description=CAGE_peak_4_at_CD1C_5end
|association_with_transcript=0bp_to_ENST00000368169,NM_001765,uc001...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=911 | |EntrezGene=911 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1636 | |HGNC=1636 | ||
|TSSclassifier=strong | |||
|UniProt=E9PGC9,P29017 | |UniProt=E9PGC9,P29017 | ||
|association_with_transcript=0bp_to_ENST00000368169,NM_001765,uc001fru.2_5end | |||
|cluster_id=chr1:158259558..158259570,+ | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_4_at_CD1C_5end | |||
|id=chr1:158259558..158259570,+ | |||
|ontology_enrichment_celltype=CL:0002087!9.75e-40!119;CL:0000738!3.09e-38!140;CL:0002031!1.76e-32!124;CL:0000037!1.88e-29!172;CL:0000566!1.88e-29!172;CL:0002032!3.66e-27!165;CL:0000837!3.66e-27!165;CL:0000988!5.73e-27!182;CL:0000945!2.41e-25!24;CL:0000826!2.41e-25!24;CL:0000236!2.39e-20!14;CL:0000542!1.41e-18!53;CL:0000051!1.41e-18!53;CL:0002057!4.50e-18!42;CL:0002009!1.51e-17!65;CL:0000838!2.24e-17!52;CL:0000766!8.85e-17!76;CL:0002194!1.04e-16!63;CL:0000576!1.04e-16!63;CL:0000040!1.04e-16!63;CL:0000559!1.04e-16!63;CL:0000860!1.79e-16!45;CL:0000557!1.88e-15!71;CL:0000839!2.37e-14!70;CL:0000763!1.04e-10!112;CL:0000049!1.04e-10!112;CL:0000840!5.23e-10!5;CL:0001029!5.23e-10!5;CL:0000767!5.72e-08!3;CL:0000842!1.04e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000236;6.38e-74;13!CL:0000945;2.94e-39;24!CL:0000542;4.57e-14;53!CL:0000840;9.92e-13;5!CL:0000990;1.18e-08;8!CL:0000451;3.65e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.28e-68,14;CL:0000945,2.58e-39,24;CL:0000826,2.58e-39,24;CL:0002087,2.88e-19,115;CL:0000738,8.16e-18,136;CL:0000838,3.61e-17,52;CL:0000542,8.24e-17,53;CL:0000051,8.24e-17,53;CL:0002031,3.47e-16,120;CL:0000037,8.39e-14,168;CL:0000988,6.21e-13,177;CL:0002032,7.33e-13,161;CL:0000837,7.33e-13,161;CL:0000840,1.07e-12,5;CL:0001029,1.07e-12,5;CL:0000990,1.24e-08,8;CL:0000451,3.81e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000051;4.57e-14;53!UBERON:0004872;8.67e-11;7!UBERON:0001045;1.56e-09;1!UBERON:0006242;4.32e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.72e-20!102;UBERON:0003061!5.72e-20!102;UBERON:0002193!8.47e-20!112;UBERON:0002371!3.84e-14!80;UBERON:0001474!1.21e-12!86;UBERON:0002405!4.16e-12!115;UBERON:0004765!1.03e-09!101;UBERON:0001434!1.03e-09!101;UBERON:0003081!3.05e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.73e-11;3!UBERON:0001154;1.56e-09;1!UBERON:0001153;1.56e-09;1!UBERON:0009854;1.56e-09;1!UBERON:0004177;3.09e-07;5!UBERON:0005057;3.09e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.43e-11,3;UBERON:0004854,1.43e-11,3;UBERON:0009034,1.43e-11,3;UBERON:0002095,1.43e-11,3;UBERON:0004782,1.43e-11,3;UBERON:0003281,1.43e-11,3;UBERON:0009664,1.43e-11,3;UBERON:0002296,1.43e-11,3;UBERON:0005602,1.43e-11,3;UBERON:0001179,1.43e-11,3;UBERON:0006293,1.43e-11,3;UBERON:0001154,1.56e-09,1;UBERON:0001153,1.56e-09,1;UBERON:0001045,1.56e-09,1 | |||
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| ||
|short_description=p4@CD1C | |||
}} | }} |
Latest revision as of 20:22, 17 September 2015
Short description: | p4@CD1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CD1C_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 0bp_to_ENST00000368169, NM_001765, uc001fru.2_5end |
EntrezGene: | CD1C |
HGNC: | 1636 |
UniProt: | E9PGC9P29017 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.28e-68 | 14 |
lymphocyte of B lineage | 2.58e-39 | 24 |
pro-B cell | 2.58e-39 | 24 |
nongranular leukocyte | 2.88e-19 | 115 |
leukocyte | 8.16e-18 | 136 |
lymphoid lineage restricted progenitor cell | 3.61e-17 | 52 |
lymphocyte | 8.24e-17 | 53 |
common lymphoid progenitor | 8.24e-17 | 53 |
hematopoietic lineage restricted progenitor cell | 3.47e-16 | 120 |
hematopoietic stem cell | 8.39e-14 | 168 |
hematopoietic cell | 6.21e-13 | 177 |
hematopoietic oligopotent progenitor cell | 7.33e-13 | 161 |
hematopoietic multipotent progenitor cell | 7.33e-13 | 161 |
immature conventional dendritic cell | 1.07e-12 | 5 |
common dendritic progenitor | 1.07e-12 | 5 |
conventional dendritic cell | 1.24e-08 | 8 |
dendritic cell | 3.81e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.43e-11 | 3 |
gastrointestinal system mesentery | 1.43e-11 | 3 |
stomach region | 1.43e-11 | 3 |
mesentery | 1.43e-11 | 3 |
gastrointestinal system serosa | 1.43e-11 | 3 |
mesentery of stomach | 1.43e-11 | 3 |
gut mesentery | 1.43e-11 | 3 |
dorsal mesentery | 1.43e-11 | 3 |
dorsal mesogastrium | 1.43e-11 | 3 |
peritoneal cavity | 1.43e-11 | 3 |
spleen primordium | 1.43e-11 | 3 |
vermiform appendix | 1.56e-09 | 1 |
caecum | 1.56e-09 | 1 |
midgut | 1.56e-09 | 1 |