FFCP PHASE1:Hg19::chr4:42659011..42659029,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10396 | |EntrezGene=10396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13531 | |HGNC=13531 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2Q0,Q4G1C1 | |UniProt=Q9Y2Q0,Q4G1C1 | ||
|association_with_transcript=80bp_to_ENST00000264449,ENST00000510289_5end | |association_with_transcript=80bp_to_ENST00000264449,ENST00000510289_5end | ||
|cluster_id=chr4:42659011..42659029,- | |||
|coexpression_cluster_id=C4415 | |||
|description=CAGE_peak_4_at_ATP8A1_5end | |description=CAGE_peak_4_at_ATP8A1_5end | ||
|id=chr4:42659011..42659029,- | |id=chr4:42659011..42659029,- | ||
|ontology_enrichment_celltype=CL:0000542!5.95e-22!53;CL:0000051!5.95e-22!53;CL:0000838!8.58e-22!52;CL:0000791!7.38e-13!18;CL:0000789!7.38e-13!18;CL:0002420!7.38e-13!18;CL:0002419!7.38e-13!18;CL:0000790!7.38e-13!18;CL:0000084!1.46e-12!25;CL:0000827!1.46e-12!25;CL:0000738!6.91e-11!140;CL:0002087!1.88e-09!119;CL:0000037!2.10e-09!172;CL:0000566!2.10e-09!172;CL:0000625!3.47e-09!11;CL:0000988!4.08e-09!182;CL:0000945!2.34e-08!24;CL:0000826!2.34e-08!24;CL:0002031!4.05e-08!124;CL:0002032!1.97e-07!165;CL:0000837!1.97e-07!165 | |ontology_enrichment_celltype=CL:0000542!5.95e-22!53;CL:0000051!5.95e-22!53;CL:0000838!8.58e-22!52;CL:0000791!7.38e-13!18;CL:0000789!7.38e-13!18;CL:0002420!7.38e-13!18;CL:0002419!7.38e-13!18;CL:0000790!7.38e-13!18;CL:0000084!1.46e-12!25;CL:0000827!1.46e-12!25;CL:0000738!6.91e-11!140;CL:0002087!1.88e-09!119;CL:0000037!2.10e-09!172;CL:0000566!2.10e-09!172;CL:0000625!3.47e-09!11;CL:0000988!4.08e-09!182;CL:0000945!2.34e-08!24;CL:0000826!2.34e-08!24;CL:0002031!4.05e-08!124;CL:0002032!1.97e-07!165;CL:0000837!1.97e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.30e-17;18!CL:0000789;2.30e-17;18!CL:0002419;2.30e-17;18!CL:0000084;2.02e-14;25!CL:0000542;3.46e-14;53!CL:0000625;1.46e-12;11!CL:0000624;9.54e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.56e-22,52;CL:0000542,1.11e-21,53;CL:0000051,1.11e-21,53;CL:0000791,2.26e-17,18;CL:0000789,2.26e-17,18;CL:0002420,2.26e-17,18;CL:0002419,2.26e-17,18;CL:0000790,2.26e-17,18;CL:0000738,3.71e-15,136;CL:0000084,1.76e-14,25;CL:0000827,1.76e-14,25;CL:0002087,1.50e-13,115;CL:0000625,1.37e-12,11;CL:0002031,3.68e-12,120;CL:0000988,9.26e-12,177;CL:0000037,4.72e-11,168;CL:0002032,5.17e-09,161;CL:0000837,5.17e-09,161;CL:0000624,1.00e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;2.30e-17;18!CL:0000051;3.46e-14;53!UBERON:0006601;9.71e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.89e-39!115;UBERON:0001049!1.62e-27!57;UBERON:0005068!1.62e-27!57;UBERON:0006241!1.62e-27!57;UBERON:0007135!1.62e-27!57;UBERON:0003080!8.65e-27!42;UBERON:0002780!2.88e-26!41;UBERON:0001890!2.88e-26!41;UBERON:0006240!2.88e-26!41;UBERON:0001893!3.20e-24!34;UBERON:0001017!4.73e-24!82;UBERON:0002020!1.09e-23!34;UBERON:0003528!1.09e-23!34;UBERON:0002791!2.08e-23!33;UBERON:0001869!4.20e-23!32;UBERON:0000955!1.02e-22!69;UBERON:0006238!1.02e-22!69;UBERON:0005743!1.17e-22!86;UBERON:0002616!3.80e-22!59;UBERON:0000073!4.86e-21!94;UBERON:0001016!4.86e-21!94;UBERON:0003075!6.07e-21!86;UBERON:0007284!6.07e-21!86;UBERON:0002346!7.26e-19!90;UBERON:0003056!7.63e-19!61;UBERON:0002619!9.83e-19!22;UBERON:0000956!1.87e-17!25;UBERON:0000203!1.87e-17!25;UBERON:0001950!3.11e-17!20;UBERON:0000153!1.96e-12!129;UBERON:0007811!1.96e-12!129;UBERON:0000033!2.82e-10!123;UBERON:0004121!9.26e-09!169;UBERON:0002420!1.45e-08!9;UBERON:0007245!1.45e-08!9;UBERON:0010009!1.45e-08!9;UBERON:0010011!1.45e-08!9;UBERON:0000454!1.45e-08!9;UBERON:0000924!5.20e-08!173;UBERON:0006601!5.20e-08!173;UBERON:0002308!1.09e-07!9;UBERON:0000125!1.09e-07!9;UBERON:0001871!2.96e-07!7;UBERON:0009663!5.42e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!1.89e-39!115;UBERON:0001049!1.62e-27!57;UBERON:0005068!1.62e-27!57;UBERON:0006241!1.62e-27!57;UBERON:0007135!1.62e-27!57;UBERON:0003080!8.65e-27!42;UBERON:0002780!2.88e-26!41;UBERON:0001890!2.88e-26!41;UBERON:0006240!2.88e-26!41;UBERON:0001893!3.20e-24!34;UBERON:0001017!4.73e-24!82;UBERON:0002020!1.09e-23!34;UBERON:0003528!1.09e-23!34;UBERON:0002791!2.08e-23!33;UBERON:0001869!4.20e-23!32;UBERON:0000955!1.02e-22!69;UBERON:0006238!1.02e-22!69;UBERON:0005743!1.17e-22!86;UBERON:0002616!3.80e-22!59;UBERON:0000073!4.86e-21!94;UBERON:0001016!4.86e-21!94;UBERON:0003075!6.07e-21!86;UBERON:0007284!6.07e-21!86;UBERON:0002346!7.26e-19!90;UBERON:0003056!7.63e-19!61;UBERON:0002619!9.83e-19!22;UBERON:0000956!1.87e-17!25;UBERON:0000203!1.87e-17!25;UBERON:0001950!3.11e-17!20;UBERON:0000153!1.96e-12!129;UBERON:0007811!1.96e-12!129;UBERON:0000033!2.82e-10!123;UBERON:0004121!9.26e-09!169;UBERON:0002420!1.45e-08!9;UBERON:0007245!1.45e-08!9;UBERON:0010009!1.45e-08!9;UBERON:0010011!1.45e-08!9;UBERON:0000454!1.45e-08!9;UBERON:0000924!5.20e-08!173;UBERON:0006601!5.20e-08!173;UBERON:0002308!1.09e-07!9;UBERON:0000125!1.09e-07!9;UBERON:0001871!2.96e-07!7;UBERON:0009663!5.42e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.12e-32;32!UBERON:0002791;6.36e-32;32!UBERON:0001893;6.43e-32;34!UBERON:0002619;9.15e-31;22!UBERON:0003528;8.17e-30;34!UBERON:0002020;8.17e-30;34!UBERON:0002780;3.11e-28;41!UBERON:0001890;3.11e-28;41!UBERON:0001950;3.43e-28;20!UBERON:0000956;3.13e-26;25!UBERON:0000203;3.13e-26;25!UBERON:0000073;1.47e-19;53!UBERON:0002616;1.47e-19;53!UBERON:0002420;1.42e-13;9!UBERON:0007245;1.42e-13;9!UBERON:0010009;1.42e-13;9!UBERON:0010011;1.42e-13;9!UBERON:0000454;1.42e-13;9!UBERON:0000955;2.35e-13;68!UBERON:0001017;3.02e-13;75!UBERON:0009663;6.49e-11;7!UBERON:0000125;3.96e-10;9!UBERON:0002308;3.96e-10;9!UBERON:0007023;4.23e-10;114!UBERON:0001016;4.73e-10;83!UBERON:0001871;5.43e-10;6!UBERON:0000200;1.33e-09;6!UBERON:0000349;2.65e-08;5!UBERON:0002021;3.32e-08;5!UBERON:0001872;6.49e-08;5!UBERON:0000369;1.61e-07;4!UBERON:0002435;1.61e-07;4!UBERON:0000204;1.61e-07;4 | |||
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| ||
|short_description=p4@ATP8A1 | |short_description=p4@ATP8A1 | ||
}} | }} |
Latest revision as of 20:26, 17 September 2015
Short description: | p4@ATP8A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ATP8A1_5end |
Coexpression cluster: | C4415_caudate_putamen_cord_Natural_CD8_nucleus_Basophils |
Association with transcript: | 80bp_to_ENST00000264449, ENST00000510289_5end |
EntrezGene: | ATP8A1 |
HGNC: | 13531 |
UniProt: | Q9Y2Q0Q4G1C1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.56e-22 | 52 |
lymphocyte | 1.11e-21 | 53 |
common lymphoid progenitor | 1.11e-21 | 53 |
mature alpha-beta T cell | 2.26e-17 | 18 |
alpha-beta T cell | 2.26e-17 | 18 |
immature T cell | 2.26e-17 | 18 |
mature T cell | 2.26e-17 | 18 |
immature alpha-beta T cell | 2.26e-17 | 18 |
leukocyte | 3.71e-15 | 136 |
T cell | 1.76e-14 | 25 |
pro-T cell | 1.76e-14 | 25 |
nongranular leukocyte | 1.50e-13 | 115 |
CD8-positive, alpha-beta T cell | 1.37e-12 | 11 |
hematopoietic lineage restricted progenitor cell | 3.68e-12 | 120 |
hematopoietic cell | 9.26e-12 | 177 |
hematopoietic stem cell | 4.72e-11 | 168 |
hematopoietic oligopotent progenitor cell | 5.17e-09 | 161 |
hematopoietic multipotent progenitor cell | 5.17e-09 | 161 |
CD4-positive, alpha-beta T cell | 1.00e-07 | 6 |