FFCP PHASE1:Hg19::chr13:60737912..60737935,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81624 | |EntrezGene=81624 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15480 | |HGNC=15480 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_ENST00000267215,ENST00000377908,ENST00000400319,ENST00000400320_5end | |association_with_transcript=-12bp_to_ENST00000267215,ENST00000377908,ENST00000400319,ENST00000400320_5end | ||
|cluster_id=chr13:60737912..60737935,- | |||
|description=CAGE_peak_3_at_DIAPH3_5end | |description=CAGE_peak_3_at_DIAPH3_5end | ||
|id=chr13:60737912..60737935,- | |id=chr13:60737912..60737935,- | ||
|ontology_enrichment_celltype=CL:0000055!4.27e-18!180;CL:0000548!5.20e-17!679;CL:0000004!5.20e-17!679;CL:0000255!5.20e-17!679;CL:0000012!9.50e-17!682;CL:0002321!4.09e-16!248;CL:0000220!1.72e-15!246;CL:0000144!2.50e-12!625;CL:0000003!1.11e-09!722;CL:0000057!1.20e-09!75;CL:0000243!3.32e-09!15;CL:0000125!3.32e-09!15;CL:0000030!3.32e-09!15;CL:0000339!3.32e-09!15;CL:0000095!7.06e-09!17;CL:0000123!7.06e-09!17;CL:0000222!1.63e-08!119;CL:0000066!5.35e-08!254 | |ontology_enrichment_celltype=CL:0000055!4.27e-18!180;CL:0000548!5.20e-17!679;CL:0000004!5.20e-17!679;CL:0000255!5.20e-17!679;CL:0000012!9.50e-17!682;CL:0002321!4.09e-16!248;CL:0000220!1.72e-15!246;CL:0000144!2.50e-12!625;CL:0000003!1.11e-09!722;CL:0000057!1.20e-09!75;CL:0000243!3.32e-09!15;CL:0000125!3.32e-09!15;CL:0000030!3.32e-09!15;CL:0000339!3.32e-09!15;CL:0000095!7.06e-09!17;CL:0000123!7.06e-09!17;CL:0000222!1.63e-08!119;CL:0000066!5.35e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:0000095;1.53e-11;17!CL:0000243;3.93e-11;15!CL:0000125;3.93e-11;15!CL:1000306;3.06e-07;4!CL:0002547;3.06e-07;4!CL:0002319;4.27e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000095,9.16e-12,17;CL:0000123,9.16e-12,17;CL:0000243,2.20e-11,15;CL:0000125,2.20e-11,15;CL:0000030,2.20e-11,15;CL:0000339,2.20e-11,15;CL:0000057,5.59e-11,76;CL:1000306,1.85e-07,4;CL:0002547,1.85e-07,4;CL:0002319,3.06e-07,25;CL:0000333,4.72e-07,41 | |||
|ontology_enrichment_development_v019=CL:0000339;3.93e-11;15 | |||
|ontology_enrichment_disease=DOID:162!3.02e-20!235;DOID:14566!3.24e-20!239;DOID:0050686!6.44e-11!137;DOID:0050687!8.34e-11!143;DOID:1115!2.49e-08!20 | |ontology_enrichment_disease=DOID:162!3.02e-20!235;DOID:14566!3.24e-20!239;DOID:0050686!6.44e-11!137;DOID:0050687!8.34e-11!143;DOID:1115!2.49e-08!20 | ||
|ontology_enrichment_disease_v019=DOID:1115;2.82e-07;20!DOID:3093;3.45e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:1115,1.71e-07,20;DOID:3093,2.37e-07,11;DOID:14566,7.23e-07,239 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;3.06e-07;4!UBERON:0000415;3.06e-07;4!UBERON:0007240;3.06e-07;4!UBERON:0005742;3.06e-07;4!UBERON:0005734;3.06e-07;4!UBERON:0004664;3.06e-07;4!UBERON:0004663;3.06e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,1.85e-07,4;UBERON:0007240,1.85e-07,4;UBERON:0005742,1.85e-07,4;UBERON:0005734,1.85e-07,4;UBERON:0004664,1.85e-07,4;UBERON:0004663,1.85e-07,4 | |||
|phase1_expression=0,0,0.281908808191942,0,0,1.74467704820074,0,0,0,0,0.697801167972428,0.436882744260345,0.263766978228454,0.74259811776028,0.331397375727916,0,0,0,0,0.738726348460727,1.42800483870977,0.313454721478088,0.85870796139317,1.64249310087461,5.02170558379211,0.305653622991805,0.164201178899891,0.157421562627358,0,0,0,1.83884244895785,0.30120591877825,0.369754010166788,0.542270404062111,0.426507697462265,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579606171470105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,2.55725123687061,0.361439152384566,0,0.144846518960824,0,0,1.22895262313288,1.99556457716308,1.66886092816939,0,0.364295288292542,0,0,0,0,0,0,0,0.596287222100115,0.860234595106124,0.694281003215189,0,0,0.825354125820202,0.417989933073621,0.258416759169329,0.71153252537342,0.33472061276467,0.402829317109147,0,0,0.367663080345869,0,0.982297011124877,0.22452937262617,0.675668882899933,0,0.949265659568129,0.183201743930407,0,0,0,0.496971951695318,3.03913227994991,1.72131935057184,3.15520282823695,2.4826786753885,1.12135520028461,0,0.24666754841716,2.17847724779836,1.34710672069688,3.59616186849609,0.151357427644931,0,1.17160715916898,0,1.1409436430889,0.149448680551801,3.40560046066918,0.647491777472526,0.280901613404497,0.204154171254893,0.368502951935304,0.206651562351531,0,0,0,0,0.673344455816265,4.50426671539071,1.10825646193673,2.19488810440419,0,0.45071417671979,0.113432183160021,1.97328599257748,0.640672166455702,0.423863802319124,6.30191301777245,2.37020817248409,1.03056216018252,0,1.5189869901714,0.779496041289589,2.01947019395292,0.0920498986422993,0,1.42003837006646,0.806016785821122,0.169560592310488,0.386521706326594,1.63647672354501,1.14721838155602,0.853815942907168,1.32529768321485,0.69716365721711,1.0366105501537,0.504641701751257,0,1.56449532329816,0,0,0,0,0.236613600079688,0.168584690078102,0,0.110293972732394,0,0.237270619111097,0,0.196221465125346,0,0.738155454624648,0,0.8231480226628,0,0,0,0,0.441463099414651,0,2.40194934417936,0,0,0.301586917234893,1.20364978706088,0.325808305310325,0,0,0,1.17408694235822,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,0.93733833986777,0.671928512795438,1.84307626415102,1.16426079513703,1.16253575405585,0.766765358330422,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0.285826432630578,0.560655421726804,0.43596006883328,0.51336800074665,0,3.57656445851882,0,0.26593811658487,0,0,1.41849132023278,0.266422179016099,0.142977993658148,0.542621605391443,0,0,0,0,0.904318131178758,2.61460037580088,1.3996218765488,0,0,0,0.239624855491583,0,0,0.723906533337896,0.410952645100767,1.07436577943937,0.336255431980582,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,1.00034104211935,0.542530047399471,0.207970861530807,1.07057393278297,0.473107245101804,0.234282829985426,0,0,0,0.664225598535437,1.29058417979192,0.434418072340414,0,0,0,0,0,0,0,0.30239029332968,0,1.2276957863045,0,0.896974044789907,1.53512174720011,0.965123526861645,0,4.31787142647436,0,0.657017248110473,0,0.232420756919918,0.362578348774867,0.200506470303285,0,0.34444334449382,0.182091168006717,0,0,0.308061348417659,0,0,0.844413031143006,0,0.510281115829547,1.29549549661284,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,1.55668090191184,1.32015199872941,0.574265537996172,0,1.6068392984416,0.290012154876366,2.46477787383431,3.22357716924872,1.24052915236078,1.28904293841928,0.580066775656914,1.19317278382541,0.267096106940212,0.165284915360978,1.15314040419064,2.4246415373971,0,0,0.62962469366128,1.3940745403212,0,0.532306030317022,0.869932992075073,0.37064843820784,3.57812216854978,0.372158369359667,0.632758849437452,0.571890581771475,0,0,0.636406495851874,0,1.2591072030832,1.09814811894422,1.06031162111118,0,0,0,0.48763373908959,0,0,0.409499734223957,1.41405431953713,0,0.551365343546124,0.66343897524122,0.876901770507525,0,0,0.405820753925408,0.30982349809975,0.845086807596724,0.717056761020258,0.687743287091848,1.07001315444375,0.354761064070598,0.211107635297664,0.329294892959902,0,0.699869440489966,0.192444225451024,0,0,0.282431402330337,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0.213648142254946,0,1.47024129588619,0,0.432807638929335,0.355709216742071,0,0.199579371432817,0.191505370132367,0.635020748171649,0.324621940274555,0,0,0.156679895773023,2.50634477090067,0.677167111206413,0,0.201799707191048,2.12923118845163,0,0,0,0,0,0.278406173895242,1.23087398947712,1.35227839237992,0.33307196799782,0,0,0,0.121360521749513,0.334330152832435,0.568272293612826,0.47748896947538,0.593929361665277,0,0,0,0.445234820091624,0.988823245360557,0.211125408127993,0.19924798825107,0.276283915531148,0.503865495708552,0.306806047506464,0.369254416383208,0.311039587661807,1.16828856491525,0,0.511572370226872,0,0,3.33410970433911,0,0,0,0,0.262379999988587,0,1.4793148277115,1.01701460117107,0,1.37897349296586,1.16641845353302,1.90987494426621,0,0,0,0,0,0,0.108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| ||
|short_description=p3@DIAPH3 | |short_description=p3@DIAPH3 | ||
}} | }} |
Latest revision as of 20:27, 17 September 2015
Short description: | p3@DIAPH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DIAPH3_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000267215, ENST00000377908, ENST00000400319, ENST00000400320_5end |
EntrezGene: | DIAPH3 |
HGNC: | 15480 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron associated cell | 9.16e-12 | 17 |
neuron associated cell (sensu Vertebrata) | 9.16e-12 | 17 |
glial cell (sensu Vertebrata) | 2.20e-11 | 15 |
glial cell | 2.20e-11 | 15 |
glioblast | 2.20e-11 | 15 |
glioblast (sensu Vertebrata) | 2.20e-11 | 15 |
fibroblast | 5.59e-11 | 76 |
fibroblast of tunica adventitia of artery | 1.85e-07 | 4 |
fibroblast of the aortic adventitia | 1.85e-07 | 4 |
neural cell | 3.06e-07 | 25 |
migratory neural crest cell | 4.72e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
artery wall | 1.85e-07 | 4 |
tunica adventitia of artery | 1.85e-07 | 4 |
adventitia | 1.85e-07 | 4 |
tunica adventitia of blood vessel | 1.85e-07 | 4 |
aorta tunica adventitia | 1.85e-07 | 4 |
aorta wall | 1.85e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
sarcoma | 1.71e-07 | 20 |
nervous system cancer | 2.37e-07 | 11 |
disease of cellular proliferation | 7.23e-07 | 239 |