FFCP PHASE1:Hg19::chr3:27235576..27235597,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=152110 | |EntrezGene=152110 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18592 | |HGNC=18592 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=124bp_to_ENST00000460447_5end | |association_with_transcript=124bp_to_ENST00000460447_5end | ||
|cluster_id=chr3:27235576..27235597,- | |||
|coexpression_cluster_id=C125 | |coexpression_cluster_id=C125 | ||
|description=CAGE_peak_5_at_NEK10_5end | |description=CAGE_peak_5_at_NEK10_5end | ||
|id=chr3:27235576..27235597,- | |id=chr3:27235576..27235597,- | ||
|ontology_enrichment_celltype=CL:0002150!5.77e-20!3;CL:0000861!5.77e-20!3;CL:0000066!2.27e-12!254;CL:0000077!5.84e-08!19;CL:0000319!6.59e-08!1 | |ontology_enrichment_celltype=CL:0002150!5.77e-20!3;CL:0000861!5.77e-20!3;CL:0000066!2.27e-12!254;CL:0000077!5.84e-08!19;CL:0000319!6.59e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000319;8.94e-20;1!CL:0000159;1.43e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,8.95e-20,1;CL:0000159,1.43e-10,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!5.29e-19!106;DOID:0050687!3.42e-16!143;DOID:162!1.95e-12!235;DOID:14566!4.53e-12!239;DOID:3030!6.59e-08!1 | |ontology_enrichment_disease=DOID:305!5.29e-19!106;DOID:0050687!3.42e-16!143;DOID:162!1.95e-12!235;DOID:14566!4.53e-12!239;DOID:3030!6.59e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:3030;8.94e-20;1!DOID:4468;2.60e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,8.95e-20,1;DOID:305,1.78e-10,106;DOID:4468,2.07e-10,2;DOID:0050687,1.27e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.39e-43!9;UBERON:0001557!8.98e-20!19;UBERON:0008947!2.70e-09!38;UBERON:0003258!2.70e-09!38;UBERON:0007195!1.25e-07!1;UBERON:0000072!1.79e-07!46 | |ontology_enrichment_uberon=UBERON:0001737!5.39e-43!9;UBERON:0001557!8.98e-20!19;UBERON:0008947!2.70e-09!38;UBERON:0003258!2.70e-09!38;UBERON:0007195!1.25e-07!1;UBERON:0000072!1.79e-07!46 | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;2.97e-19;1!UBERON:0001737;1.45e-18;9!UBERON:0001557;1.45e-18;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,5.62e-19,1;UBERON:0001737,1.25e-18,9;UBERON:0001557,3.62e-09,19 | |||
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|short_description=p5@NEK10 | |short_description=p5@NEK10 | ||
}} | }} |
Latest revision as of 20:57, 17 September 2015
Short description: | p5@NEK10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NEK10_5end |
Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
Association with transcript: | 124bp_to_ENST00000460447_5end |
EntrezGene: | NEK10 |
HGNC: | 18592 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 8.95e-20 | 1 |
seromucus secreting cell | 1.43e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 5.62e-19 | 1 |
larynx | 1.25e-18 | 9 |
upper respiratory tract | 3.62e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 8.95e-20 | 1 |
carcinoma | 1.78e-10 | 106 |
clear cell adenocarcinoma | 2.07e-10 | 2 |
cell type cancer | 1.27e-07 | 143 |