FFCP PHASE1:Hg19::chr1:158656419..158656436,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6708 | |EntrezGene=6708 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11272 | |HGNC=11272 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=8bp_to_ENST00000368147_5end | |association_with_transcript=8bp_to_ENST00000368147_5end | ||
|cluster_id=chr1:158656419..158656436,- | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_3_at_SPTA1_5end | |description=CAGE_peak_3_at_SPTA1_5end | ||
|id=chr1:158656419..158656436,- | |id=chr1:158656419..158656436,- | ||
|ontology_enrichment_celltype=CL:0000763!9.65e-11!112;CL:0000049!9.65e-11!112;CL:0000764!6.63e-10!2;CL:0000765!6.63e-10!2;CL:0000050!6.63e-10!2;CL:0000038!6.63e-10!2;CL:0000558!6.63e-10!2;CL:0000547!6.63e-10!2;CL:0000549!6.63e-10!2;CL:0000550!6.63e-10!2;CL:0000552!6.63e-10!2 | |ontology_enrichment_celltype=CL:0000763!9.65e-11!112;CL:0000049!9.65e-11!112;CL:0000764!6.63e-10!2;CL:0000765!6.63e-10!2;CL:0000050!6.63e-10!2;CL:0000038!6.63e-10!2;CL:0000558!6.63e-10!2;CL:0000547!6.63e-10!2;CL:0000549!6.63e-10!2;CL:0000550!6.63e-10!2;CL:0000552!6.63e-10!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;7.69e-21;2!CL:0000558;7.69e-21;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,7.70e-21,2;CL:0000765,7.70e-21,2;CL:0000050,7.70e-21,2;CL:0000038,7.70e-21,2;CL:0000558,7.70e-21,2;CL:0000547,7.70e-21,2;CL:0000549,7.70e-21,2;CL:0000550,7.70e-21,2;CL:0000552,7.70e-21,2;CL:0000763,5.24e-09,108;CL:0000049,5.24e-09,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!1.45e-18!8;DOID:8692!4.57e-14!31;DOID:1240!1.06e-10!39;DOID:2531!1.18e-07!51;DOID:0060083!1.18e-07!51 | |ontology_enrichment_disease=DOID:1036!1.45e-18!8;DOID:8692!4.57e-14!31;DOID:1240!1.06e-10!39;DOID:2531!1.18e-07!51;DOID:0060083!1.18e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:1036;2.70e-30;8!DOID:8692;4.96e-23;31!DOID:1240;8.48e-16;39!DOID:2531;9.27e-11;51!DOID:0060083;9.27e-11;51!DOID:8552;1.40e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,2.70e-30,8;DOID:8692,8.35e-24,31;DOID:1240,1.11e-18,39;DOID:2531,5.29e-14,51;DOID:0060083,5.29e-14,51;DOID:8552,1.10e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!3.30e-16!15;UBERON:0000179!3.30e-16!15;UBERON:0000463!3.30e-16!15;UBERON:0000341!4.12e-09!2;UBERON:0002390!3.61e-07!102;UBERON:0003061!3.61e-07!102 | |ontology_enrichment_uberon=UBERON:0000178!3.30e-16!15;UBERON:0000179!3.30e-16!15;UBERON:0000463!3.30e-16!15;UBERON:0000341!4.12e-09!2;UBERON:0002390!3.61e-07!102;UBERON:0003061!3.61e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.76e-22;15!UBERON:0000179;5.76e-22;15!UBERON:0000463;5.76e-22;15!UBERON:0002390;4.49e-13;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.33e-22,15;UBERON:0000179,7.33e-22,15;UBERON:0000463,7.33e-22,15 | |||
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| ||
|short_description=p3@SPTA1 | |short_description=p3@SPTA1 | ||
}} | }} |
Latest revision as of 21:34, 17 September 2015
Short description: | p3@SPTA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SPTA1_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 8bp_to_ENST00000368147_5end |
EntrezGene: | SPTA1 |
HGNC: | 11272 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 7.70e-21 | 2 |
erythroblast | 7.70e-21 | 2 |
megakaryocyte-erythroid progenitor cell | 7.70e-21 | 2 |
erythroid progenitor cell | 7.70e-21 | 2 |
reticulocyte | 7.70e-21 | 2 |
proerythroblast | 7.70e-21 | 2 |
basophilic erythroblast | 7.70e-21 | 2 |
polychromatophilic erythroblast | 7.70e-21 | 2 |
orthochromatic erythroblast | 7.70e-21 | 2 |
myeloid cell | 5.24e-09 | 108 |
common myeloid progenitor | 5.24e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
blood | 7.33e-22 | 15 |
haemolymphatic fluid | 7.33e-22 | 15 |
organism substance | 7.33e-22 | 15 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.70e-30 | 8 |
myeloid leukemia | 8.35e-24 | 31 |
leukemia | 1.11e-18 | 39 |
hematologic cancer | 5.29e-14 | 51 |
immune system cancer | 5.29e-14 | 51 |
chronic myeloid leukemia | 1.10e-10 | 1 |