FFCP PHASE1:Hg19::chr4:46392290..46392324,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2555 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4076 | |||
|TSSclassifier=strong | |||
|UniProt=G5E9Z6,Q4W5L8 | |||
|association_with_transcript=96bp_to_ENST00000515082,uc003gxe.2_5end | |||
|cluster_id=chr4:46392290..46392324,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_13_at_GABRA2_5end | |||
|id=chr4:46392290..46392324,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;5.40e-16;2!UBERON:0006601;3.81e-14;82!UBERON:0006222;6.15e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!2.46e-97!34;UBERON:0001869!1.86e-96!32;UBERON:0002791!5.50e-93!33;UBERON:0002780!1.96e-92!41;UBERON:0001890!1.96e-92!41;UBERON:0006240!1.96e-92!41;UBERON:0002020!3.29e-90!34;UBERON:0003528!3.29e-90!34;UBERON:0003080!4.01e-90!42;UBERON:0001049!5.64e-79!57;UBERON:0005068!5.64e-79!57;UBERON:0006241!5.64e-79!57;UBERON:0007135!5.64e-79!57;UBERON:0002616!4.25e-76!59;UBERON:0002619!7.19e-76!22;UBERON:0000955!1.13e-71!69;UBERON:0006238!1.13e-71!69;UBERON:0001950!1.79e-67!20;UBERON:0001017!8.66e-67!82;UBERON:0000956!1.48e-66!25;UBERON:0000203!1.48e-66!25;UBERON:0005743!2.12e-63!86;UBERON:0003056!2.18e-60!61;UBERON:0007023!1.76e-58!115;UBERON:0003075!7.04e-57!86;UBERON:0007284!7.04e-57!86;UBERON:0000073!8.58e-57!94;UBERON:0001016!8.58e-57!94;UBERON:0002346!4.81e-54!90;UBERON:0000033!7.20e-40!123;UBERON:0000153!1.10e-37!129;UBERON:0007811!1.10e-37!129;UBERON:0002420!1.83e-32!9;UBERON:0007245!1.83e-32!9;UBERON:0010009!1.83e-32!9;UBERON:0010011!1.83e-32!9;UBERON:0000454!1.83e-32!9;UBERON:0004121!1.35e-28!169;UBERON:0000924!9.14e-28!173;UBERON:0006601!9.14e-28!173;UBERON:0000200!4.94e-27!6;UBERON:0002308!2.32e-24!9;UBERON:0000125!2.32e-24!9;UBERON:0009663!1.20e-23!7;UBERON:0000349!1.36e-23!5;UBERON:0001872!1.21e-22!5;UBERON:0001871!1.20e-20!7;UBERON:0000025!1.10e-19!194;UBERON:0000369!1.20e-19!4;UBERON:0002435!1.20e-19!4;UBERON:0000204!1.20e-19!4;UBERON:0010082!1.20e-19!4;UBERON:0002021!2.53e-15!5;UBERON:0005383!3.92e-15!3;UBERON:0005382!3.92e-15!3;UBERON:0002771!2.07e-14!3;UBERON:0004111!2.14e-14!241;UBERON:0000064!4.00e-14!219;UBERON:0000477!6.55e-12!286;UBERON:0000483!2.48e-11!309;UBERON:0000119!3.79e-11!312;UBERON:0001876!9.55e-11!2;UBERON:0001873!1.46e-10!2;UBERON:0010122!1.46e-10!2;UBERON:0001870!2.93e-10!2;UBERON:0001954!4.42e-10!2;UBERON:0003022!4.42e-10!2;UBERON:0002421!4.42e-10!2;UBERON:0002600!4.42e-10!2;UBERON:0000475!5.55e-10!365;UBERON:0001875!8.33e-10!2;UBERON:0006514!8.33e-10!2;UBERON:0002360!1.55e-09!2;UBERON:0000094!1.55e-09!2;UBERON:0007645!1.55e-09!2;UBERON:0000062!3.76e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.50e-110;32!UBERON:0001893;3.18e-103;34!UBERON:0002791;4.76e-102;32!UBERON:0002619;2.77e-100;22!UBERON:0003528;4.22e-94;34!UBERON:0002020;4.22e-94;34!UBERON:0000956;2.36e-88;25!UBERON:0000203;2.36e-88;25!UBERON:0001950;5.80e-87;20!UBERON:0002780;2.63e-74;41!UBERON:0001890;2.63e-74;41!UBERON:0000073;2.59e-41;53!UBERON:0002616;2.59e-41;53!UBERON:0002420;1.87e-40;9!UBERON:0007245;1.87e-40;9!UBERON:0010009;1.87e-40;9!UBERON:0010011;1.87e-40;9!UBERON:0000454;1.87e-40;9!UBERON:0000349;1.82e-37;5!UBERON:0000369;1.06e-30;4!UBERON:0002435;1.06e-30;4!UBERON:0000204;1.06e-30;4!UBERON:0000200;1.52e-30;6!UBERON:0000955;4.78e-30;68!UBERON:0009663;8.42e-27;7!UBERON:0001871;1.26e-26;6!UBERON:0001017;1.83e-25;75!UBERON:0002021;7.41e-24;5!UBERON:0001872;1.19e-23;5!UBERON:0005383;2.36e-23;3!UBERON:0005382;2.36e-23;3!UBERON:0000125;7.90e-21;9!UBERON:0002308;7.90e-21;9!UBERON:0001016;1.44e-18;83!UBERON:0001876;1.86e-16;2!UBERON:0001873;5.40e-16;2!UBERON:0002771;8.17e-16;2!UBERON:0001954;1.79e-15;2!UBERON:0003022;1.79e-15;2!UBERON:0002421;1.79e-15;2!UBERON:0002600;1.79e-15;2!UBERON:0007023;3.57e-13;114!UBERON:0001870;5.68e-11;3!UBERON:0001882;4.02e-09;1!UBERON:0001874;4.02e-09;1!UBERON:0005403;4.02e-09;1!UBERON:0002022;6.15e-09;1!UBERON:0007190;6.15e-09;1!UBERON:0002581;1.37e-08;1!UBERON:0002902;1.37e-08;1!UBERON:0009899;1.37e-08;1!UBERON:0011216;2.42e-08;132!UBERON:0010314;4.47e-08;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,6.63e-125,32;UBERON:0001893,1.48e-117,34;UBERON:0002791,2.03e-114,32;UBERON:0003528,1.13e-107,34;UBERON:0002020,1.13e-107,34;UBERON:0002780,5.06e-106,41;UBERON:0001890,5.06e-106,41;UBERON:0003080,5.06e-106,41;UBERON:0006240,5.06e-106,41;UBERON:0002619,3.16e-100,22;UBERON:0000956,2.65e-88,25;UBERON:0000203,2.65e-88,25;UBERON:0001950,5.22e-87,20;UBERON:0000073,1.28e-81,53;UBERON:0002616,1.28e-81,53;UBERON:0001049,4.03e-77,56;UBERON:0005068,4.03e-77,56;UBERON:0006241,4.03e-77,56;UBERON:0007135,4.03e-77,56;UBERON:0003056,1.37e-70,61;UBERON:0000955,2.18e-67,68;UBERON:0006238,2.18e-67,68;UBERON:0001017,3.22e-56,81;UBERON:0003075,9.59e-52,82;UBERON:0007284,9.59e-52,82;UBERON:0001016,2.48e-50,89;UBERON:0002346,3.48e-49,86;UBERON:0002420,2.05e-40,9;UBERON:0007245,2.05e-40,9;UBERON:0010009,2.05e-40,9;UBERON:0010011,2.05e-40,9;UBERON:0000454,2.05e-40,9;UBERON:0010371,4.51e-40,104;UBERON:0007023,5.94e-40,114;UBERON:0000349,2.77e-37,5;UBERON:0000369,7.24e-31,4;UBERON:0002435,7.24e-31,4;UBERON:0000204,7.24e-31,4;UBERON:0010082,7.24e-31,4;UBERON:0010314,8.69e-31,132;UBERON:0000200,2.73e-30,6;UBERON:0009663,8.67e-27,7;UBERON:0001871,1.26e-26,6;UBERON:0004121,1.08e-24,171;UBERON:0000924,1.08e-24,171;UBERON:0006601,1.08e-24,171;UBERON:0002021,4.48e-24,5;UBERON:0001872,1.56e-23,5;UBERON:0005383,1.56e-23,3;UBERON:0005382,1.56e-23,3;UBERON:0000125,8.08e-21,9;UBERON:0002308,8.08e-21,9;UBERON:0000025,6.19e-20,192;UBERON:0011216,6.02e-18,223;UBERON:0001876,2.01e-16,2;UBERON:0001873,4.00e-16,2;UBERON:0010122,4.00e-16,2;UBERON:0002771,1.23e-15,2;UBERON:0001954,2.41e-15,2;UBERON:0003022,2.41e-15,2;UBERON:0002421,2.41e-15,2;UBERON:0002600,2.41e-15,2;UBERON:0004111,4.01e-15,240;UBERON:0000483,6.04e-11,306;UBERON:0001870,7.30e-11,3;UBERON:0000119,8.49e-11,309;UBERON:0001874,3.58e-09,1;UBERON:0001882,4.19e-09,1;UBERON:0005403,4.19e-09,1;UBERON:0002022,4.89e-09,1;UBERON:0007190,7.18e-09,1;UBERON:0002902,9.74e-09,1;UBERON:0009899,9.74e-09,1;UBERON:0002581,1.22e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95903353436409,2.39138007897872,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0.969332746095218,1.66982576691332,0,0,0,0,0,0,0,0,0,0,1.77148277162768,3.61789315876224,0,0,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,2.57690890297873,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,3.16553979779394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.547621515567972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,1.22583065500418,0,0,0,0,0,2.91597871958518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,2.07444650333337,1.3771002377715,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,3.53260738030527,4.25089728976755,1.43670473151436,1.8460472781668,0,1.79808856406967,0.968853873791107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29627787702542,1.56215619722769,1.03343398250592,2.53663240775627,0.546974809018219,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,1.64431933907123,0,0,0,3.77077415798405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97175321553653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.827463966895162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p13@GABRA2 | |||
}} |
Latest revision as of 21:42, 17 September 2015
Short description: | p13@GABRA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_GABRA2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 96bp_to_ENST00000515082, uc003gxe.2_5end |
EntrezGene: | GABRA2 |
HGNC: | 4076 |
UniProt: | G5E9Z6Q4W5L8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data