FFCP PHASE1:Hg19::chr12:24967393..24967404,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=586 | |EntrezGene=586 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=976 | |HGNC=976 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=190bp_to_AK025615_5end | |association_with_transcript=190bp_to_AK025615_5end | ||
|cluster_id=chr12:24967393..24967404,- | |||
|coexpression_cluster_id=C128 | |coexpression_cluster_id=C128 | ||
|description=CAGE_peak_28_at_BCAT1_5end | |description=CAGE_peak_28_at_BCAT1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.17e-15;7!CL:0000586;3.17e-15;7!CL:0000306;1.75e-07;4!CL:0002222;1.75e-07;4!CL:0002224;1.75e-07;4 | |ontology_enrichment_celltype_v019=CL:0000039;3.17e-15;7!CL:0000586;3.17e-15;7!CL:0000306;1.75e-07;4!CL:0002222;1.75e-07;4!CL:0002224;1.75e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.65e-15,7;CL:0000586,2.65e-15,7;CL:0000306,1.80e-07,4;CL:0002222,1.80e-07,4;CL:0002224,1.80e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.83e-11;10!UBERON:0005564;5.83e-11;10 | |ontology_enrichment_development_v019=UBERON:0009117;5.83e-11;10!UBERON:0005564;5.83e-11;10 | ||
|ontology_enrichment_disease=DOID:14566!1.20e-07!239;DOID:162!2.28e-07!235;DOID:3095!4.06e-07!22;DOID:2994!4.06e-07!22 | |ontology_enrichment_disease=DOID:14566!1.20e-07!239;DOID:162!2.28e-07!235;DOID:3095!4.06e-07!22;DOID:2994!4.06e-07!22 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0006562;1.14e-13;2!UBERON:0000473;1.88e-13;8!UBERON:0003135;4.73e-10;11!UBERON:0010077;1.75e-07;4!UBERON:0005389;1.75e-07;4!UBERON:0000484;1.75e-07;4!UBERON:0000965;1.75e-07;4!UBERON:0001803;1.75e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0006562;1.14e-13;2!UBERON:0000473;1.88e-13;8!UBERON:0003135;4.73e-10;11!UBERON:0010077;1.75e-07;4!UBERON:0005389;1.75e-07;4!UBERON:0000484;1.75e-07;4!UBERON:0000965;1.75e-07;4!UBERON:0001803;1.75e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.61e-13,8;UBERON:0003135,4.22e-10,11;UBERON:0010077,1.80e-07,4;UBERON:0005389,1.80e-07,4;UBERON:0000484,1.80e-07,4;UBERON:0002546,1.80e-07,4;UBERON:0000965,1.80e-07,4;UBERON:0001803,1.80e-07,4;UBERON:0003073,1.80e-07,4;UBERON:0005426,1.80e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0.602694528023977,0,0,0,0,0,0,0.136874425072884,0,0,0,0.0787107813136792,0,0,0,0,0,0,0.154934401160603,0.284338464974843,0,0,0,0,0.223915474239924,0.971680998056939,0.257575567634187,0,0,0.242584061187816,0.232429036905685,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0.402829317109147,0,0,0.735326160691737,0,0.17859945656816,0.673588117878509,0.337834441449967,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0.150238058906597,0.453728732640084,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0.193260853163297,0,0,0,0.265059536642971,0.464775771478074,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.352226082707465,0,0,0,0,0,0.246217006087397,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0.129271715757778,0,0,0.26593811658487,0,0,1.41849132023278,0,0.142977993658148,0,0,0,0,0,0,0,0.299918973546171,0,0.502257091432126,2.10833939483032,0,1.14861935834114,0,0.144781306667579,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0,0,0.164254312027618,0,0,0.241718899183244,0.200506470303285,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0.154048617114644,0,0,0.429680979473094,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0.308033580176089,0,0.869932992075073,0.18532421910392,0.143124886741991,0.372158369359667,0,0.190630193923825,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.272999822815972,0.282810863907425,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0.143411352204052,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.144269212976445,0,0.159426272728822,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0.270455678475983,0.33307196799782,0,0.18714054040822,0,0,0.111443384277478,0,0.47748896947538,0,0.614321404198464,0,0,0,0.16480387422676,0,0,0,0,0.102268682502155,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0.0897576444097721,0.217294743844016,0.31900115973192,0,0,0,0,0.166211681900156,0,0,0.335643173951685,0,0.476809736941136,0,0,0.141353071433941,0,0,0.0884575645033392,0.611030144933625,0.296521128680622,0.123563938946503,0,0,0,0,0.182454789215666,0,0.242780379534093,0,0,0,0,0.150323419414493,0.103688191397247,0.664653872707185,0,0.313932918407225,0,0,0,0,0.195984794828755,0.0870592065804026,0.17472666824203,0,0,0,0,0.0969890164884194,0.0882561266915003,0,0,0,0,0,0.0801588202515337,0,0.999048047910651,0,0,0,0,0,0,0.135904206073614,0,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0,0,0,0,0.160753148465019,0.275078873194468,0,0,0,0,0,0,0,0.528001682597033,0,0.191915197319445,0,0,0,0,0,0,1.19730191562487,0.164185041498678,0,0,0,0,0.258565912723101,0,0.513260513652988,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.276697269872462,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0,0.414706207840855,0,0.521745061811734,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0,0.336749488765919,0,0.770479321629213,0.214441591374926,0,0.226705925512272,0.231522474323834,0,0,0,0,0,0.192914038270915,0,0,0.345430341731199,0,0.138258436151731,0,0,0,0,0,0,0.19998739585493,0,0,0.567515953566836,0,0,0,0.127894371303652,0.215649622793364,0,0.109209638192014,0,0,0.247871528518004,0,0,0.157723490002507,0,0,0.3062454773532,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0.198916222116275,0,0.80682027481408,0,0,0,0,0,0,0,0,0,0,0,0,1.02209942111676,0,0,0,0,0,0.230467975111559,0.685952037749674,0,0.0657727735628491,0.118193840883968,0,0,0,0,0,0,0,0,0,0.116241425368125,1.21700790611806,0,0,0,0,0,0.236664001461131,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0.235676547101626,0,0,0,0.169927114687817,0.0939839179798536,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0.378499274505237,0.327796715891087,0.253397002022874,1.73381010561369,6.14600032110789,0.275684698604535,0.50141507858475,0.151557396436479,0,0,0.103432995861895,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0.162806537221949,0.320182037633146,0,0.269475606319761,0,0,0,0,0,0 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| ||
|short_description=p28@BCAT1 | |short_description=p28@BCAT1 | ||
}} | }} |
Latest revision as of 21:44, 17 September 2015
Short description: | p28@BCAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_BCAT1_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | 190bp_to_AK025615_5end |
EntrezGene: | BCAT1 |
HGNC: | 976 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.65e-15 | 7 |
germ cell | 2.65e-15 | 7 |
crystallin accumulating cell | 1.80e-07 | 4 |
vertebrate lens cell | 1.80e-07 | 4 |
lens epithelial cell | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
testis | 1.61e-13 | 8 |
male reproductive organ | 4.22e-10 | 11 |
cuboidal epithelium | 1.80e-07 | 4 |
transparent eye structure | 1.80e-07 | 4 |
simple cuboidal epithelium | 1.80e-07 | 4 |
cranial placode | 1.80e-07 | 4 |
lens of camera-type eye | 1.80e-07 | 4 |
epithelium of lens | 1.80e-07 | 4 |
lens placode | 1.80e-07 | 4 |
lens vesicle | 1.80e-07 | 4 |