FFCP PHASE1:Hg19::chr3:29322372..29322386,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27303 | |EntrezGene=27303 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13427 | |HGNC=13427 | ||
|TSSclassifier=strong | |||
|UniProt=C9JIJ9 | |UniProt=C9JIJ9 | ||
|association_with_transcript=-86bp_to_ENST00000434693_5end | |association_with_transcript=-86bp_to_ENST00000434693_5end | ||
|cluster_id=chr3:29322372..29322386,+ | |||
|description=CAGE_peak_9_at_RBMS3_5end | |description=CAGE_peak_9_at_RBMS3_5end | ||
|id=chr3:29322372..29322386,+ | |id=chr3:29322372..29322386,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000174,6.01e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000922;5.31e-10;49!UBERON:0005090;1.39e-09;2!UBERON:0001630;1.39e-09;2!UBERON:0000010;4.67e-08;8!UBERON:0002368;1.98e-07;33 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.22e-14!115;UBERON:0000475!3.91e-09!365;UBERON:0000073!1.20e-08!94;UBERON:0001016!1.20e-08!94;UBERON:0000481!9.86e-08!347;UBERON:0001049!2.30e-07!57;UBERON:0005068!2.30e-07!57;UBERON:0006241!2.30e-07!57;UBERON:0007135!2.30e-07!57;UBERON:0002346!4.07e-07!90;UBERON:0001017!5.16e-07!82;UBERON:0000955!5.47e-07!69;UBERON:0006238!5.47e-07!69;UBERON:0003075!9.40e-07!86;UBERON:0007284!9.40e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;5.31e-10;49!UBERON:0005090;1.39e-09;2!UBERON:0001630;1.39e-09;2!UBERON:0000010;4.67e-08;8!UBERON:0002368;1.98e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,4.81e-10,2;UBERON:0001630,4.81e-10,2;UBERON:0000010,3.15e-08,8;UBERON:0002368,6.82e-07,35 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.422863212287913,0,0.446961094427288,0,0,0.631719873426831,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0.37129905888014,0,0.672325146451775,0,0,0,0.246242116153576,0.204000691244253,0,0,0,0.125542639594803,0.305653622991805,0.0821005894499457,0.393553906568396,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.977766799900771,0,0,0.334231370655521,0,0.221533894583621,0.812411591295047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,2.43806866313962,0.670700859703636,0,0,0,0.144846518960824,0,0,0.756278537312543,0.221729397462564,0.702678285545008,0.130979075497713,0,0,0,0,0,2.8618874916641,0.571994910780128,0.74291500265913,0.198762407366705,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0.506522046658319,0.662045904066094,0,0.354668382198357,0.560677600142307,0,0,0,0.134710672069688,0.326923806226917,0.151357427644931,0,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0,0.300476117813194,0.113432183160021,0.717558542755448,0.427114777637135,0,0.600182192168805,0.618315175430633,0.515281080091258,0.18611685633159,0.506328996723799,0.389748020644795,0.757301322732344,0.552299391853796,0.484938170456436,0,0.201504196455281,0.169560592310488,0.386521706326594,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0.38474715694639,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,1.44331342025273,0.115930404975077,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0.93733833986777,0.16798212819886,0,0.179117045405697,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0.57191197463259,1.08524321078289,0,0.325736184293735,1.06617584622764,0,0.904318131178758,0.871533458600294,0.399891964728228,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0.271265023699736,0.207970861530807,0.178428988797162,0.630809660135739,0.35142424497814,0,0,0,0,0.184369168541703,0.0868836144680828,0.391602314925481,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0.61384789315225,0,0.640695746278505,0.511707249066704,0.965123526861645,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0,0,0.364182336013434,0.131124414959424,0.451199612907412,0.0770153371044148,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0.537101224341368,0,0.0852266274161009,0.267096106940212,0,0,0,0,0,0.94443704049192,0,0.616067160352178,0.532306030317022,0.869932992075073,0,0.286249773483982,0,0.316379424718726,0.38126038784765,0,0,0,0,0.539617372749944,0.274537029736055,0.471249609382746,0,0,0,0,0.243713489631284,0,0.272999822815972,0.141405431953713,0,0,0.66343897524122,0,0,0,0,0,0,0.430234056612155,0.392996164052485,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0,0.929015875628594,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0.485442086998054,0.222886768554957,0,0,0,0,0,0.422008249231538,0.556543525114529,0.16480387422676,0.211125408127993,2.59022384726391,0.276283915531148,0,0.20453736500431,0.123084805461069,0.311039587661807,0,0.179021174675609,0,0.295930216910801,0,0,0.969332746095218,0.185536196323703,0,0,0,0.724999575434793,0,0.254253650292766,0.236387681767936,0,0,0.520874984799877,0,0.361789315876224,0,0.110579259931225,0,0.438770794307945,0,0.41827123283581,0.615602068030377,0.341826167541004,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,0.265372693510018,1.83309043480088,0,0,0,0.067401132980677,1.60515529459758,0,0,0,0,0.394584402849391,1.20990716048664,0.30607276163049,0.189559738885464,0.150323419414493,0.103688191397247,0.664653872707185,0,0,0,0.284609546029793,0.416024019039416,0,0,0.261177619741208,0.698906672968121,0.687944129886466,0.0967563312890851,0.365446585430928,0,0.387956065953678,1.5003541537555,1.12990370390266,0.959293472527256,0,0.316553979779393,0,0.160317640503067,0.426905989478705,0,0,1.14536596165916,0,0,0.124252535565433,0.471388069233591,0.543616824294456,0.523014231561666,0.407992870545287,0.288950589901519,0.600420288709789,0.273810757783986,0,1.71906176567983,0,0,0.916641696046735,0,0.998395002494955,0.858452096273142,0.446342914883745,1.74677028465488,0.720599767084807,1.16495949527454,0,0,0,0,0,0,0.272406812223151,0,0.275078873194468,0.415440338029185,0,0,0.364497339948148,0,0.236417121897595,0.262272940674991,0.105600336519406,0,0.575745591958336,0.714695326373367,0,0.25426853765475,0,0,0,0,0,0.851940108927109,0.226624183040251,0.293104467356165,2.65013777824443,0.387848869084652,0.79339561045614,0,0,0.213574825135389,0.628817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| 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| ||
|short_description=p9@RBMS3 | |short_description=p9@RBMS3 | ||
}} | }} |
Latest revision as of 21:48, 17 September 2015
Short description: | p9@RBMS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RBMS3_5end |
Coexpression cluster: | NA |
Association with transcript: | -86bp_to_ENST00000434693_5end |
EntrezGene: | RBMS3 |
HGNC: | 13427 |
UniProt: | C9JIJ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
steroid hormone secreting cell | 6.01e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
muscle structure | 4.81e-10 | 2 |
muscle organ | 4.81e-10 | 2 |
peripheral nervous system | 3.15e-08 | 8 |
endocrine gland | 6.82e-07 | 35 |