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FFCP PHASE1:Hg19::chr19:3979860..3979898,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=1938
|EntrezGene=1938
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=3214
|HGNC=3214
|TSSclassifier=strong
|UniProt=P13639
|UniProt=P13639
|association_with_transcript=13bp_to_M19997_5end
|association_with_transcript=13bp_to_M19997_5end
|cluster_id=chr19:3979860..3979898,-
|description=CAGE_peak_5_at_EEF2_5end
|description=CAGE_peak_5_at_EEF2_5end
|id=chr19:3979860..3979898,-
|id=chr19:3979860..3979898,-
|ontology_enrichment_celltype=CL:0000144!2.17e-09!625;CL:0002371!2.83e-09!591;CL:0000055!1.07e-08!180;CL:0000183!3.82e-08!59;CL:0000393!9.33e-08!60;CL:0000211!9.33e-08!60;CL:0000222!1.95e-07!119;CL:0000012!2.33e-07!682;CL:0002321!2.66e-07!248;CL:0000548!2.67e-07!679;CL:0000004!2.67e-07!679;CL:0000255!2.67e-07!679;CL:0000187!3.13e-07!54;CL:0000220!4.27e-07!246;CL:0000680!7.85e-07!57;CL:0000056!7.85e-07!57;CL:0000355!7.85e-07!57
|ontology_enrichment_celltype=CL:0000144!2.17e-09!625;CL:0002371!2.83e-09!591;CL:0000055!1.07e-08!180;CL:0000183!3.82e-08!59;CL:0000393!9.33e-08!60;CL:0000211!9.33e-08!60;CL:0000222!1.95e-07!119;CL:0000012!2.33e-07!682;CL:0002321!2.66e-07!248;CL:0000548!2.67e-07!679;CL:0000004!2.67e-07!679;CL:0000255!2.67e-07!679;CL:0000187!3.13e-07!54;CL:0000220!4.27e-07!246;CL:0000680!7.85e-07!57;CL:0000056!7.85e-07!57;CL:0000355!7.85e-07!57
|ontology_enrichment_celltype_v019=
|ontology_enrichment_celltype_v019_2=CL:0000393,4.80e-08,61;CL:0000211,4.80e-08,61;CL:0002321,9.97e-08,250;CL:0000222,1.22e-07,121;CL:0000187,1.42e-07,55;CL:0000680,3.00e-07,58;CL:0000056,3.00e-07,58;CL:0000355,3.00e-07,58
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004290!4.38e-08!70;UBERON:0001134!1.44e-07!61;UBERON:0002036!1.44e-07!61;UBERON:0003082!1.44e-07!61;UBERON:0000486!1.95e-07!82;UBERON:0002385!2.16e-07!63;UBERON:0001015!2.16e-07!63;UBERON:0000383!2.16e-07!63;UBERON:0000914!4.43e-07!83;UBERON:0002329!4.43e-07!83;UBERON:0003077!4.43e-07!83;UBERON:0003059!4.43e-07!83;UBERON:0007282!4.43e-07!83;UBERON:0009618!4.43e-07!83;UBERON:0007285!4.43e-07!83
|ontology_enrichment_uberon=UBERON:0004290!4.38e-08!70;UBERON:0001134!1.44e-07!61;UBERON:0002036!1.44e-07!61;UBERON:0003082!1.44e-07!61;UBERON:0000486!1.95e-07!82;UBERON:0002385!2.16e-07!63;UBERON:0001015!2.16e-07!63;UBERON:0000383!2.16e-07!63;UBERON:0000914!4.43e-07!83;UBERON:0002329!4.43e-07!83;UBERON:0003077!4.43e-07!83;UBERON:0003059!4.43e-07!83;UBERON:0007282!4.43e-07!83;UBERON:0009618!4.43e-07!83;UBERON:0007285!4.43e-07!83
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019_2=UBERON:0007503,5.80e-10,78;UBERON:0002329,1.55e-08,71;UBERON:0003059,1.55e-08,71;UBERON:0007282,1.55e-08,71;UBERON:0004290,1.55e-08,71;UBERON:0009618,1.55e-08,71;UBERON:0007524,2.03e-08,73;UBERON:0003077,4.54e-08,72;UBERON:0007285,4.54e-08,72;UBERON:0001134,5.23e-08,62;UBERON:0002036,5.23e-08,62;UBERON:0003082,5.23e-08,62;UBERON:0002385,8.00e-08,64;UBERON:0001015,8.00e-08,64;UBERON:0000383,8.00e-08,64;UBERON:0000486,1.21e-07,83;UBERON:0000926,2.56e-07,315;UBERON:0004120,2.56e-07,315;UBERON:0006603,2.56e-07,315
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|short_description=p5@EEF2
|short_description=p5@EEF2
}}
}}

Latest revision as of 21:48, 17 September 2015

Short description:p5@EEF2
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_5_at_EEF2_5end
Coexpression cluster:NA
Association with transcript: 13bp_to_M19997_5end
EntrezGene:EEF2
HGNC: 3214
UniProt: P13639
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data