FFCP PHASE1:Hg19::chr6:31560704..31560716,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:31560704..31560716,-
|short_description=p3@NCR3
|description=CAGE_peak_3_at_NCR3_5end
|association_with_transcript=19bp_to_ENST00000491161_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=259197 | |EntrezGene=259197 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19077 | |HGNC=19077 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=19bp_to_ENST00000491161_5end | |||
|cluster_id=chr6:31560704..31560716,- | |||
|coexpression_cluster_id=C2055 | |||
|description=CAGE_peak_3_at_NCR3_5end | |||
|id=chr6:31560704..31560716,- | |||
|ontology_enrichment_celltype=CL:0000838!3.56e-50!52;CL:0000542!4.87e-49!53;CL:0000051!4.87e-49!53;CL:0000625!6.20e-28!11;CL:0000791!3.46e-26!18;CL:0000789!3.46e-26!18;CL:0002420!3.46e-26!18;CL:0002419!3.46e-26!18;CL:0000790!3.46e-26!18;CL:0000738!8.42e-26!140;CL:0000037!1.32e-23!172;CL:0000566!1.32e-23!172;CL:0000084!1.57e-23!25;CL:0000827!1.57e-23!25;CL:0002087!5.54e-23!119;CL:0000988!1.30e-21!182;CL:0002032!3.22e-21!165;CL:0000837!3.22e-21!165;CL:0000945!1.25e-20!24;CL:0000826!1.25e-20!24;CL:0002031!8.15e-19!124;CL:0000236!1.39e-17!14;CL:0000623!1.26e-09!3;CL:0000825!1.26e-09!3;CL:0000842!1.28e-08!3;CL:0000767!1.84e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000623;6.03e-23;3!CL:0000542;5.67e-18;53!CL:0000625;5.30e-16;11!CL:0000791;6.92e-14;18!CL:0000789;6.92e-14;18!CL:0002419;6.92e-14;18!CL:0000236;2.13e-13;13!CL:0000084;3.14e-13;25!CL:0002127;5.58e-09;1!CL:0000911;5.58e-09;1!CL:0000814;5.58e-09;1!CL:0000945;3.58e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,6.61e-28,52;CL:0000542,2.51e-27,53;CL:0000051,2.51e-27,53;CL:0000623,7.02e-23,3;CL:0000825,7.02e-23,3;CL:0000625,8.03e-16,11;CL:0000791,9.36e-14,18;CL:0000789,9.36e-14,18;CL:0002420,9.36e-14,18;CL:0002419,9.36e-14,18;CL:0000790,9.36e-14,18;CL:0000084,3.77e-13,25;CL:0000827,3.77e-13,25;CL:0002087,1.27e-12,115;CL:0000236,2.11e-12,14;CL:0000738,1.04e-11,136;CL:0002031,2.26e-10,120;CL:0000037,3.83e-10,168;CL:0000988,1.86e-09,177;CL:0002032,2.17e-09,161;CL:0000837,2.17e-09,161;CL:0002127,5.59e-09,1;CL:0000914,5.59e-09,1;CL:0000911,5.59e-09,1;CL:0000814,5.59e-09,1;CL:0002042,5.59e-09,1;CL:0002039,5.59e-09,1;CL:0002040,5.59e-09,1;CL:0002041,5.59e-09,1;CL:0000945,3.71e-07,24;CL:0000826,3.71e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000051;5.67e-18;53!CL:0000790;6.92e-14;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;2.20e-08;1!DOID:0060061;2.20e-08;1!DOID:8691;2.20e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.71e-08,1;DOID:0060061,1.71e-08,1;DOID:8691,1.71e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.55e-08!7;UBERON:0000178!9.00e-08!15;UBERON:0000179!9.00e-08!15;UBERON:0000463!9.00e-08!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@NCR3 | |||
}} | }} |
Latest revision as of 22:09, 17 September 2015
Short description: | p3@NCR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NCR3_5end |
Coexpression cluster: | C2055_NK_CD4_Natural_CD8_CD19_blood_Whole |
Association with transcript: | 19bp_to_ENST00000491161_5end |
EntrezGene: | NCR3 |
HGNC: | 19077 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.71e-08 | 1 |
cutaneous T cell lymphoma | 1.71e-08 | 1 |
mycosis fungoides | 1.71e-08 | 1 |