FFCP PHASE1:Hg19::chr6:31560704..31560716,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=259197 | |EntrezGene=259197 | ||
Line 8: | Line 8: | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=19bp_to_ENST00000491161_5end | |association_with_transcript=19bp_to_ENST00000491161_5end | ||
|cluster_id=chr6:31560704..31560716,- | |||
|coexpression_cluster_id=C2055 | |coexpression_cluster_id=C2055 | ||
|description=CAGE_peak_3_at_NCR3_5end | |description=CAGE_peak_3_at_NCR3_5end |
Latest revision as of 22:09, 17 September 2015
Short description: | p3@NCR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NCR3_5end |
Coexpression cluster: | C2055_NK_CD4_Natural_CD8_CD19_blood_Whole |
Association with transcript: | 19bp_to_ENST00000491161_5end |
EntrezGene: | NCR3 |
HGNC: | 19077 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@NCR3 |
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0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 6.61e-28 | 52 |
lymphocyte | 2.51e-27 | 53 |
common lymphoid progenitor | 2.51e-27 | 53 |
natural killer cell | 7.02e-23 | 3 |
pro-NK cell | 7.02e-23 | 3 |
CD8-positive, alpha-beta T cell | 8.03e-16 | 11 |
mature alpha-beta T cell | 9.36e-14 | 18 |
alpha-beta T cell | 9.36e-14 | 18 |
immature T cell | 9.36e-14 | 18 |
mature T cell | 9.36e-14 | 18 |
Showing 1 to 10 of 31 entries
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.71e-08 | 1 |
cutaneous T cell lymphoma | 1.71e-08 | 1 |
mycosis fungoides | 1.71e-08 | 1 |
Showing 1 to 3 of 3 entries