FFCP PHASE1:Hg19::chr15:49255632..49255650,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=399694 | |EntrezGene=399694 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16743 | |HGNC=16743 | ||
|TSSclassifier=strong | |||
|UniProt=Q6S5L8 | |UniProt=Q6S5L8 | ||
|association_with_transcript=0bp_to_ENST00000332408,NM_203349,uc001zxb.1_5end | |association_with_transcript=0bp_to_ENST00000332408,NM_203349,uc001zxb.1_5end | ||
|cluster_id=chr15:49255632..49255650,- | |||
|coexpression_cluster_id=C2337 | |||
|description=CAGE_peak_5_at_SHC4_5end | |description=CAGE_peak_5_at_SHC4_5end | ||
|id=chr15:49255632..49255650,- | |id=chr15:49255632..49255650,- | ||
|ontology_enrichment_celltype=CL:0000075!2.72e-09!27;CL:0000192!1.62e-07!42;CL:0000514!1.62e-07!42;CL:0000133!2.12e-07!59;CL:0000710!4.22e-07!20;CL:0000680!7.27e-07!57;CL:0000056!7.27e-07!57;CL:0000355!7.27e-07!57 | |ontology_enrichment_celltype=CL:0000075!2.72e-09!27;CL:0000192!1.62e-07!42;CL:0000514!1.62e-07!42;CL:0000133!2.12e-07!59;CL:0000710!4.22e-07!20;CL:0000680!7.27e-07!57;CL:0000056!7.27e-07!57;CL:0000355!7.27e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000148;2.40e-22;10!CL:0000147;3.76e-21;14!CL:0000710;6.79e-11;20!CL:0000075;1.52e-10;27!CL:0002567;1.89e-09;3!CL:0002077;9.14e-08;34!CL:0002591;1.33e-07;1!CL:0000342;2.82e-07;1!CL:0002565;2.82e-07;1!CL:0002566;2.82e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.67e-22,10;CL:0000541,1.67e-22,10;CL:0000147,3.66e-21,14;CL:0000710,5.70e-11,20;CL:0000075,1.27e-10,27;CL:0002567,1.90e-09,3;CL:0002077,2.80e-08,34;CL:0000333,3.01e-08,41;CL:0002591,1.51e-07,1;CL:0002566,1.61e-07,1;CL:0000342,4.90e-07,1;CL:0002565,4.90e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;3.38e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.34e-13,2 | |||
|ontology_enrichment_uberon=UBERON:0000119!1.21e-11!312;UBERON:0000481!2.54e-11!347;UBERON:0000483!2.75e-11!309;UBERON:0000475!5.78e-11!365;UBERON:0004121!1.43e-09!169;UBERON:0000924!1.79e-09!173;UBERON:0006601!1.79e-09!173;UBERON:0000033!1.33e-08!123;UBERON:0000153!1.53e-08!129;UBERON:0007811!1.53e-08!129;UBERON:0003075!2.21e-08!86;UBERON:0007284!2.21e-08!86;UBERON:0000477!3.55e-08!286;UBERON:0002346!3.63e-08!90;UBERON:0002385!1.96e-07!63;UBERON:0001015!1.96e-07!63;UBERON:0000383!1.96e-07!63;UBERON:0001135!2.65e-07!15;UBERON:0004111!3.14e-07!241;UBERON:0000914!4.34e-07!83;UBERON:0002329!4.34e-07!83;UBERON:0003077!4.34e-07!83;UBERON:0003059!4.34e-07!83;UBERON:0007282!4.34e-07!83;UBERON:0009618!4.34e-07!83;UBERON:0007285!4.34e-07!83;UBERON:0007023!8.29e-07!115;UBERON:0005256!8.93e-07!143 | |ontology_enrichment_uberon=UBERON:0000119!1.21e-11!312;UBERON:0000481!2.54e-11!347;UBERON:0000483!2.75e-11!309;UBERON:0000475!5.78e-11!365;UBERON:0004121!1.43e-09!169;UBERON:0000924!1.79e-09!173;UBERON:0006601!1.79e-09!173;UBERON:0000033!1.33e-08!123;UBERON:0000153!1.53e-08!129;UBERON:0007811!1.53e-08!129;UBERON:0003075!2.21e-08!86;UBERON:0007284!2.21e-08!86;UBERON:0000477!3.55e-08!286;UBERON:0002346!3.63e-08!90;UBERON:0002385!1.96e-07!63;UBERON:0001015!1.96e-07!63;UBERON:0000383!1.96e-07!63;UBERON:0001135!2.65e-07!15;UBERON:0004111!3.14e-07!241;UBERON:0000914!4.34e-07!83;UBERON:0002329!4.34e-07!83;UBERON:0003077!4.34e-07!83;UBERON:0003059!4.34e-07!83;UBERON:0007282!4.34e-07!83;UBERON:0009618!4.34e-07!83;UBERON:0007285!4.34e-07!83;UBERON:0007023!8.29e-07!115;UBERON:0005256!8.93e-07!143 | ||
|ontology_enrichment_uberon_v019=UBERON:0002135;2.82e-07;1!UBERON:0002506;2.82e-07;1!UBERON:0001769;2.82e-07;1!UBERON:0003101;9.29e-07;22!UBERON:0000079;9.29e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002135,2.83e-07,1;UBERON:0002506,4.90e-07,1;UBERON:0001769,4.90e-07,1;UBERON:0003101,9.48e-07,22;UBERON:0000079,9.48e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.662794751455832,0.672325146451775,0,0.730310090387373,0.975865597581014,0.369363174230364,0.204000691244253,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0.289693037921647,0,4.86634870302636,0.472674085820339,0.665188192387692,0.175669571386252,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.573673241497627,0,0,0,0.49333509683432,0,0.404132016209064,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0,0.245668634623536,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0.337552664482532,0.0974370051611986,0.252433774244115,0,0,0,0.10075209822764,0,0.773043412653187,0.545492241181669,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02940686179115,0.219500570817251,0,0,0,0.325808305310325,0,1.44331342025273,0.463721619900307,0.234817388471643,0.144366447761074,0.462985512576611,0,1.58040879591855,0,0,0,0,1.87467667973554,0,0.283550194484773,0.0895585227028483,0.290633938513962,3.06706143332169,0,0,0,0,0,1.90493682876507,6.49380323449072,2.34434894420094,0,4.93571964975953,8.10926256178577,7.14566081576446,0.224262168690721,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0.791951872933429,0,0,0.299918973546171,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0.271265023699736,0.207970861530807,0.178428988797162,0,0.117141414992713,0,0,1.03473071292505,0,0.553107505625109,0.260650843404249,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0.511707249066704,0,0,0,0,0,0,0,0,1.20303882181971,0,0.34444334449382,0,0.131124414959424,0,1.07821471946181,0,0,0.844413031143006,0,0,0.215915916102139,0,0,0,0.509752546090077,0.831076008928724,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0,0.0890320356467374,0,0,0.510450849978337,0,0.464845549297286,0.31481234683064,0.6970372701606,0,0,0.869932992075073,0,0.429374660225974,0.372158369359667,0.632758849437452,0,0,0,0.318203247925937,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,0.731140468893853,0,0.136499911407986,1.1312434556297,2.26016233240486,1.10273068709225,0,0.876901770507525,0.578775534266688,0,0.202910376962704,0,0.281695602532241,0,0,0.35667105148125,0,0.211107635297664,0,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.333926115068718,0,0,1.19548792950642,0.276283915531148,0,13.7040034552887,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.461701551022782,0,0,0,0,0,0.732780747214898,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0.995261931078505,0.353830258013357,0.611030144933625,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0.137041924646751,0,0.126621591911757,0,0,0.426905989478705,0,0,0,0,0,0,0,0.135904206073614,0,0.101998217636322,0,0,0.136905378891993,0,0.429765441419957,0,1.39641200636127,0.229160424011684,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0.78741985211799,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0.121499113316049,0,0,0.209818352539992,0,0.717149357331379,0,0.714695326373367,0,1.77987976358325,0,0.864221491201268,0,0,0,0.681552087141687,0.679872549120754,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0.372578417648301,0,0.37494122388632,1.51649117541648,2.56918800190471,0.705797459094515,0,0.144921028610825,0.298509605773748,0,0,0,0,0,0,0,0.932623203496683,1.33069634990671,0,0,0,0,0,0,0,0,0,0.363697318405119,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0.353378291891762,0,0,0.256241518587947,0,0,0,0,0,0,0,0.737318726261158,0,0,0,0,0,0.368211900503681,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0,0,0.705351887381368,0,0.192687675289379,0,0.159633859057151,0,0,0.0691572524642179,0.161475645631851,0,0,0.235939446695481,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0.126831620387814,0.546974809018219,0,0.496211178389294,0.703484977438482,0.255524855279191,0,0,0.606965604236632,0.227662191351298,0,0,0,0.611727596791485,0.263091094251396,0,1.66847102838104,0.156986185701028,0.314231179832004,0,0,0.215927591218621,0,1.50100742770978,0,0,0,0,0,0,0,0,0,0.170426809518315,0.423387050190929,0,0,0,0,0,0,0,0,1.1598144313382,0.971421986118279,0,0.397901550322736,0,0,0,0,0.154348316215889,0.87423824201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| ||
|short_description=p5@SHC4 | |short_description=p5@SHC4 | ||
}} | }} |
Latest revision as of 22:22, 17 September 2015
Short description: | p5@SHC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SHC4_5end |
Coexpression cluster: | C2337_astrocytoma_Chondrocyte_Melanocyte_Mast_testis_leiomyoblastoma_tridermal |
Association with transcript: | 0bp_to_ENST00000332408, NM_203349, uc001zxb.1_5end |
EntrezGene: | SHC4 |
HGNC: | 16743 |
UniProt: | Q6S5L8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.67e-22 | 10 |
melanoblast | 1.67e-22 | 10 |
pigment cell | 3.66e-21 | 14 |
neurecto-epithelial cell | 5.70e-11 | 20 |
columnar/cuboidal epithelial cell | 1.27e-10 | 27 |
light melanocyte | 1.90e-09 | 3 |
ecto-epithelial cell | 2.80e-08 | 34 |
migratory neural crest cell | 3.01e-08 | 41 |
smooth muscle cell of the pulmonary artery | 1.51e-07 | 1 |
dark melanocyte | 1.61e-07 | 1 |
pigment cell (sensu Vertebrata) | 4.90e-07 | 1 |
iris pigment epithelial cell | 4.90e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
mitral valve | 2.83e-07 | 1 |
iris epithelium | 4.90e-07 | 1 |
iris | 4.90e-07 | 1 |
male organism | 9.48e-07 | 22 |
male reproductive system | 9.48e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.34e-13 | 2 |