FFCP PHASE1:Hg19::chr15:49256070..49256084,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:49256070..49256084,-
|short_description=p9@SHC4
|description=CAGE_peak_9_at_SHC4_5end
|association_with_transcript=-429bp_to_ENST00000332408,NM_203349,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=399694 | |EntrezGene=399694 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16743 | |HGNC=16743 | ||
|TSSclassifier=strong | |||
|UniProt=Q6S5L8 | |UniProt=Q6S5L8 | ||
|association_with_transcript=-429bp_to_ENST00000332408,NM_203349,uc001zxb.1_5end | |||
|cluster_id=chr15:49256070..49256084,- | |||
|coexpression_cluster_id=C2337 | |||
|description=CAGE_peak_9_at_SHC4_5end | |||
|id=chr15:49256070..49256084,- | |||
|ontology_enrichment_celltype=CL:0000133!2.99e-09!59;CL:0000333!5.81e-08!41;CL:0000710!8.00e-08!20;CL:0000221!6.06e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000148;9.42e-23;10!CL:0000147;3.09e-16;14!CL:0000710;2.48e-11;20!CL:0002566;2.87e-10;1!CL:0000075;2.36e-08;27!CL:0000138;4.73e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.39e-22,10;CL:0000541,1.39e-22,10;CL:0000147,4.06e-16,14;CL:0000710,2.99e-11,20;CL:0002566,4.33e-10,1;CL:0000333,1.14e-09,41;CL:0000075,2.70e-08,27;CL:0000058,4.39e-07,6;CL:0000138,4.39e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.07e-11!82;UBERON:0005743!5.33e-10!86;UBERON:0000955!8.09e-10!69;UBERON:0006238!8.09e-10!69;UBERON:0000073!9.77e-10!94;UBERON:0001016!9.77e-10!94;UBERON:0002346!1.99e-09!90;UBERON:0000924!5.47e-09!173;UBERON:0006601!5.47e-09!173;UBERON:0001049!7.39e-09!57;UBERON:0005068!7.39e-09!57;UBERON:0006241!7.39e-09!57;UBERON:0007135!7.39e-09!57;UBERON:0003075!4.01e-08!86;UBERON:0007284!4.01e-08!86;UBERON:0004121!6.25e-08!169;UBERON:0002616!1.15e-07!59;UBERON:0002780!4.25e-07!41;UBERON:0001890!4.25e-07!41;UBERON:0006240!4.25e-07!41;UBERON:0003080!8.43e-07!42 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0,0,0,0,0.286235987131057,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5905718941022,12.1658717575659,0.283604451492204,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45071417671979,0,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0.772921620136887,0,0.168776332241266,0,0,0,0,0.355009592516614,0,0,0.386521706326594,0,0,0,0,0,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0.790204397959275,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,1.15014803749563,6.40462209264727,0.088048434013226,0,0,0,1.07946420296687,0.381988425558278,1.17217447210047,0,4.01027221542962,4.20480280981484,2.28661146104463,0,0,0,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0,0.791951872933429,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.837581326671744,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0.177561725313127,0,0,0,0,0.200506470303285,0,0.459257792658427,0.364182336013434,0.262248829918848,0.451199612907412,0.539107359730903,0,0,0.422206515571503,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824686816419805,0,0,0,0,0.731140468893853,0,0,0.282810863907425,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0.140669416410513,0.667852230137435,0,0,0.398495976502139,0,0,14.0108095027952,0.123084805461069,0,0.179736702294654,0,0,0,0,0,0,0.0927680981618513,0,0.520855522170466,0.0874599999961957,0,0,0,0,0,0.291604613383254,0,0,0.241192877250816,0,0,0,0.438770794307945,0,0.278847488557207,0.230850775511391,0.113942055847001,0,0,0,0,0.457987967009312,0,0,0.156980256395025,0,0,0,0,0,0.635746315921515,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0.394584402849391,1.20990716048664,0.61214552326098,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0.219267951258557,0.246346371159628,0,0,0,0.137041924646751,0.397429223405979,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0.104602846312333,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0.393709926058995,0,0.795229689809303,0,0,0,0,0,0,0.182248669974074,0,0.0788057072991982,0.104909176269996,0,4.84075816198681,0,0,0,0.76280561296425,0,0.864221491201268,0,0,0.082092520749339,0.340776043570843,0.453248366080503,0,0,0.387848869084652,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0.18628920882415,0.138348634936231,0.37494122388632,2.42638588066636,0.570930667089935,0.470531639396343,0,0.144921028610825,0.149254802886874,0,0,0,0.251567901752575,0,0.228840068396924,0,0.932623203496683,1.33069634990671,0.318593534327405,0.449803112163605,0.310525913752519,0.414706207840855,0,0,0,0.380805212168795,0,0.181848659202559,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0.622077260032973,0,0,0,0.109209638192014,0,0.212574920101683,0.495743057036009,0,0,0,0,0.705351887381368,0.6124909547064,0.128458450192919,0,0,0,0.252071696221718,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0.126831620387814,0.546974809018219,0,0,1.23109871051734,0,2.67850917939143,0.336283722218824,0,0,0,0.115233987555779,0,0.339848664884159,0,0,1.4460082245969,0,0.314231179832004,0,0.913158720509496,0.863710364874486,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,1.88126918544609,0.245148321753905,0.471353094203252,0.196308467114945,0.297046400327086,0,0.169927114687817,0,0.0644578879735772,0,0,2.11736923029415,0,0,0,0.573358332605805,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.985123076837112,0.535928260312357,0.829169439458779,0.20686599172379,0,0,0,0,0.112131862580613,0,0,0,0,0,0.286888821570705,0.665320713092027,0.244209805832924,0,1.9307228228694,0,0,0,0,0,0.402547587182052,0 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| ||
|short_description=p9@SHC4 | |||
}} | }} |
Latest revision as of 22:22, 17 September 2015
Short description: | p9@SHC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SHC4_5end |
Coexpression cluster: | C2337_astrocytoma_Chondrocyte_Melanocyte_Mast_testis_leiomyoblastoma_tridermal |
Association with transcript: | -429bp_to_ENST00000332408, NM_203349, uc001zxb.1_5end |
EntrezGene: | SHC4 |
HGNC: | 16743 |
UniProt: | Q6S5L8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.39e-22 | 10 |
melanoblast | 1.39e-22 | 10 |
pigment cell | 4.06e-16 | 14 |
neurecto-epithelial cell | 2.99e-11 | 20 |
dark melanocyte | 4.33e-10 | 1 |
migratory neural crest cell | 1.14e-09 | 41 |
columnar/cuboidal epithelial cell | 2.70e-08 | 27 |
chondroblast | 4.39e-07 | 6 |
chondrocyte | 4.39e-07 | 6 |