FFCP PHASE1:Hg19::chr12:25205568..25205585,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:25205568..25205585,+ to FFCP PHASE1:Hg19::chr12:25205568..25205585,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4033 | |EntrezGene=4033 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6690 | |HGNC=6690 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000548766_5end | |||
|cluster_id=chr12:25205568..25205585,+ | |||
|coexpression_cluster_id=C96 | |||
|description=CAGE_peak_5_at_LRMP_5end | |||
|id=chr12:25205568..25205585,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.63e-61!172;CL:0000566!1.63e-61!172;CL:0000988!1.16e-56!182;CL:0002032!5.62e-56!165;CL:0000837!5.62e-56!165;CL:0000738!6.89e-56!140;CL:0002031!9.81e-42!124;CL:0002087!1.50e-41!119;CL:0000542!7.39e-31!53;CL:0000051!7.39e-31!53;CL:0000838!8.03e-30!52;CL:0000945!4.39e-26!24;CL:0000826!4.39e-26!24;CL:0000763!7.93e-25!112;CL:0000049!7.93e-25!112;CL:0000766!7.68e-20!76;CL:0000236!1.65e-15!14;CL:0000557!2.23e-14!71;CL:0000839!1.01e-13!70;CL:0002009!1.25e-11!65;CL:0002194!2.26e-11!63;CL:0000576!2.26e-11!63;CL:0000040!2.26e-11!63;CL:0000559!2.26e-11!63;CL:0000134!1.01e-09!358;CL:0002057!2.25e-09!42;CL:0002320!6.04e-09!365;CL:0000094!2.96e-08!8;CL:0000860!3.21e-08!45 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.27e-56;24!CL:0000236;3.53e-30;13!CL:0000542;7.24e-28;53!CL:0000094;2.51e-10;8!CL:0000738;4.21e-09;136!CL:0002087;1.31e-08;104!CL:0000775;4.15e-08;3!CL:0000097;4.38e-08;5!CL:0000623;1.01e-07;3!CL:0000081;2.65e-07;11!CL:0000988;5.25e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,9.37e-57,24;CL:0000826,9.37e-57,24;CL:0000542,1.73e-46,53;CL:0000051,1.73e-46,53;CL:0000838,2.17e-44,52;CL:0000037,1.51e-40,168;CL:0002032,1.29e-39,161;CL:0000837,1.29e-39,161;CL:0000988,1.12e-37,177;CL:0000738,7.42e-37,136;CL:0000236,7.37e-33,14;CL:0002031,1.47e-27,120;CL:0002087,3.19e-23,115;CL:0000134,4.56e-11,354;CL:0002320,1.45e-10,361;CL:0000094,1.58e-10,8;CL:0000817,7.84e-09,3;CL:0000219,8.13e-09,386;CL:0000775,3.35e-08,3;CL:0000097,5.56e-08,5;CL:0002028,5.56e-08,5;CL:0000623,6.59e-08,3;CL:0000825,6.59e-08,3;CL:0000763,1.38e-07,108;CL:0000049,1.38e-07,108;CL:0000081,1.92e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;7.24e-28;53 | |||
|ontology_enrichment_disease=DOID:2531!2.02e-15!51;DOID:0060083!2.02e-15!51;DOID:1240!7.63e-10!39;DOID:0060058!9.78e-09!10;DOID:8692!3.94e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:0060058;6.64e-16;10!DOID:2531;1.13e-09;51!DOID:0060083;1.13e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.27e-18,51;DOID:0060083,5.27e-18,51;DOID:0060058,6.52e-16,10;DOID:1240,1.55e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.99e-22!102;UBERON:0003061!2.99e-22!102;UBERON:0002193!5.03e-22!112;UBERON:0007023!3.22e-16!115;UBERON:0002371!5.35e-13!80;UBERON:0001474!4.03e-11!86;UBERON:0002405!6.21e-11!115;UBERON:0000178!8.05e-09!15;UBERON:0000179!8.05e-09!15;UBERON:0000463!8.05e-09!15;UBERON:0004765!3.83e-08!101;UBERON:0001434!3.83e-08!101;UBERON:0002384!6.51e-08!375;UBERON:0002020!9.74e-08!34;UBERON:0003528!9.74e-08!34;UBERON:0001893!9.83e-08!34;UBERON:0002791!2.48e-07!33;UBERON:0001869!5.00e-07!32;UBERON:0002619!5.08e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004177;1.40e-12;5!UBERON:0005057;1.40e-12;5!UBERON:0002106;9.27e-08;3!UBERON:0002390;3.49e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.94e-10,371;UBERON:0004177,9.08e-09,7;UBERON:0005057,9.08e-09,7;UBERON:0002106,1.25e-07,3;UBERON:0004854,1.25e-07,3;UBERON:0009034,1.25e-07,3;UBERON:0002095,1.25e-07,3;UBERON:0004782,1.25e-07,3;UBERON:0003281,1.25e-07,3;UBERON:0009664,1.25e-07,3;UBERON:0002296,1.25e-07,3;UBERON:0005602,1.25e-07,3;UBERON:0001179,1.25e-07,3;UBERON:0006293,1.25e-07,3;UBERON:0002193,7.55e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.5119213668341,13.3823960803412,15.2698915748538,0.393364276848904,1.91914699048606,0.619264493264304,0,0,0,11.7750144882058,14.2169232487422,0.587200878669695,0.553995408531877,1.00272223735071,1.08505435357926,0.223915474239924,0.971680998056939,0.257575567634187,0.145398238779565,0,0.485168122375632,0.232429036905685,0,0.619412741790207,0.28769239232215,0.256160706529101,0.236482229888585,0.689491361473237,0.645484683583826,0,0.564727018627814,0.545812300115692,0.224723484445085,0.306083892370903,0.641858054152187,1.91801137739712,0,0.797854630486527,0,0,0,0,0.251248665256743,0,0,0,0.736555271975129,0,0.211255286311942,0,0.419317291016752,1.23561494261145,0.150176892841506,0.803627933485401,0.855038231223746,0.99458338599545,0.365328307529268,1.75996244461323,3.82297027883492,2.66852776159066,2.13365111283254,5.20514783146816,3.4485146397269,2.64417949113945,1.90810750907073,3.98449078376614,7.6340834618222,3.82273228125229,0,0.560508562981536,1.31692042387539,0.196709770113833,0.786021525498329,1.02800749499755,0,0.977766799900771,0,1.94826728407911,0.111410456885174,0,0.221533894583621,0.270803863765016,0,0,0.493313713811028,0.276350017785848,0,0.889719378972363,0.802622484269139,0,0.113309342697566,0,0.34362744548263,1.26509846009751,0.95569624297229,0,0.950452044448374,0.150575119077773,0.511946444617674,0,0.947109008176067,0,1.20964045934839,2.13952156626806,1.73789284659359,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.72038491523742,0,0,0.649094787309367,0.522389211897802,0.398873881556595,0.476981248610684,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85609409356116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0,0,0,0,0,0,0,0,3.4486426652716,1.40877494421162,3.31724984865235,2.01767934783746,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0,0,0,0,1.97030760201927,2.80315847317372,2.18183161675572,0,0,0,0,0,3.74503511973591,5.9832291840805,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.862856803274467,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.52234282769651,0.764637207142375,1.13929437434833,0.714695326373367,1.64544909234478,1.29694662238543,0.540031437238115,3.17250070517708,0,0,0,7.9895365304059,8.94469120453958,22.0539714380084,0,0.399158742865633,0.383010740264733,2.32840940996271,2.27235358192189,1.12318871245384,4.33645890163065,0.313359791546046,0,0.169291777801603,4.81764225311099,2.82519590067467,1.70338495076131,0.343505344755765,0.921722292925374,0.894704431569664,1.50164227540718,1.36771666781428,0,0,0.270455678475983,0,0,0.18714054040822,0,0,0.111443384277478,0,0,0,0,0.994147647766298,1.68803299692615,0,0,0,0.19924798825107,3.86797481743607,0,0,2.21552649829925,0,0,0,1.02314474045374,0.887790650732402,2.3948309234694,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591095237907095,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0.424059214301822,0,0,0.176915129006678,0,0,0,0.104421949505455,0.067401132980677,0,0.234264445725339,5.10873409803865,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.569797163602908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0.525774708558629,0,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0,1.52411997718412,1.59045937961861,0.272406812223151,0,0,0,2.0247650239635,0,0.364497339948148,0,1.18208560948797,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.258565912723101,0.13223260174269,0,0,0.320362237703084,0.157204305099666,0.828478110694391,1.48849806543585,1.7785046870815,23.6277640858938,0,0,0,0,0,0,0.886068179966986,0.610131324509816,0,0,0.554645257684261,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0.398594520940089,0.163565394255844,0,0,0,3.39978572953381,0.106691729694141,15.4993481694734,0,0,0,0,0,0,0,0,0,0.425149840203366,0,0,0,221.916950433527,0,0,0,0.385375350578757,2.8339315265117,0.319267718114302,0.205116364240755,0,0,0.807378228159255,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.337687923091973,0,0.206686796501184,0.507326481551255,0.546974809018219,0,0,0,0,0,0,0,0,0.0887023701626388,6.6835712782352,0,0.339848664884159,0.131545547125698,0,0,0.313972371402056,0.314231179832004,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0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| ||
|short_description=p5@LRMP | |||
}} | }} |
Latest revision as of 22:26, 17 September 2015
Short description: | p5@LRMP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LRMP_5end |
Coexpression cluster: | C96_non_acute_tonsil_spleen_Burkitt_lymphoma_appendix |
Association with transcript: | 0bp_to_ENST00000548766_5end |
EntrezGene: | LRMP |
HGNC: | 6690 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 9.37e-57 | 24 |
pro-B cell | 9.37e-57 | 24 |
lymphocyte | 1.73e-46 | 53 |
common lymphoid progenitor | 1.73e-46 | 53 |
lymphoid lineage restricted progenitor cell | 2.17e-44 | 52 |
hematopoietic stem cell | 1.51e-40 | 168 |
hematopoietic oligopotent progenitor cell | 1.29e-39 | 161 |
hematopoietic multipotent progenitor cell | 1.29e-39 | 161 |
hematopoietic cell | 1.12e-37 | 177 |
leukocyte | 7.42e-37 | 136 |
B cell | 7.37e-33 | 14 |
hematopoietic lineage restricted progenitor cell | 1.47e-27 | 120 |
nongranular leukocyte | 3.19e-23 | 115 |
mesenchymal cell | 4.56e-11 | 354 |
connective tissue cell | 1.45e-10 | 361 |
granulocyte | 1.58e-10 | 8 |
precursor B cell | 7.84e-09 | 3 |
motile cell | 8.13e-09 | 386 |
neutrophil | 3.35e-08 | 3 |
mast cell | 5.56e-08 | 5 |
basophil mast progenitor cell | 5.56e-08 | 5 |
natural killer cell | 6.59e-08 | 3 |
pro-NK cell | 6.59e-08 | 3 |
myeloid cell | 1.38e-07 | 108 |
common myeloid progenitor | 1.38e-07 | 108 |
blood cell | 1.92e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.94e-10 | 371 |
hemopoietic organ | 9.08e-09 | 7 |
immune organ | 9.08e-09 | 7 |
spleen | 1.25e-07 | 3 |
gastrointestinal system mesentery | 1.25e-07 | 3 |
stomach region | 1.25e-07 | 3 |
mesentery | 1.25e-07 | 3 |
gastrointestinal system serosa | 1.25e-07 | 3 |
mesentery of stomach | 1.25e-07 | 3 |
gut mesentery | 1.25e-07 | 3 |
dorsal mesentery | 1.25e-07 | 3 |
dorsal mesogastrium | 1.25e-07 | 3 |
peritoneal cavity | 1.25e-07 | 3 |
spleen primordium | 1.25e-07 | 3 |
hemolymphoid system | 7.55e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.27e-18 | 51 |
immune system cancer | 5.27e-18 | 51 |
lymphoma | 6.52e-16 | 10 |
leukemia | 1.55e-07 | 39 |