FFCP PHASE1:Hg19::chr8:29952916..29953016,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23484 | |EntrezGene=23484 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6555 | |HGNC=6555 | ||
|TSSclassifier=strong | |||
|UniProt=C9JVM4,E5RIQ0,E5RHU8,E5RIL0,E9PHP8,O95214,Q6FHL7 | |UniProt=C9JVM4,E5RIQ0,E5RHU8,E5RIL0,E9PHP8,O95214,Q6FHL7 | ||
|association_with_transcript=0bp_to_ENST00000442880,ENST00000518001,ENST00000520682,ENST00000520739,ENST00000523116,NM_001128208,NM_015344,uc003xhw.3,uc003xhx.2_5end | |association_with_transcript=0bp_to_ENST00000442880,ENST00000518001,ENST00000520682,ENST00000520739,ENST00000523116,NM_001128208,NM_015344,uc003xhw.3,uc003xhx.2_5end | ||
|cluster_id=chr8:29952916..29953016,+ | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_1_at_LEPROTL1_5end | |description=CAGE_peak_1_at_LEPROTL1_5end | ||
|id=chr8:29952916..29953016,+ | |id=chr8:29952916..29953016,+ | ||
|ontology_enrichment_celltype=CL:0000791!3.16e-12!18;CL:0000789!3.16e-12!18;CL:0002420!3.16e-12!18;CL:0002419!3.16e-12!18;CL:0000790!3.16e-12!18;CL:0000084!4.69e-11!25;CL:0000827!4.69e-11!25;CL:0000625!2.78e-08!11;CL:0000037!4.13e-07!172;CL:0000566!4.13e-07!172 | |ontology_enrichment_celltype=CL:0000791!3.16e-12!18;CL:0000789!3.16e-12!18;CL:0002420!3.16e-12!18;CL:0002419!3.16e-12!18;CL:0000790!3.16e-12!18;CL:0000084!4.69e-11!25;CL:0000827!4.69e-11!25;CL:0000625!2.78e-08!11;CL:0000037!4.13e-07!172;CL:0000566!4.13e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.02e-12;18!CL:0000789;3.02e-12;18!CL:0002419;3.02e-12;18!CL:0000084;4.77e-11;25!CL:0000625;2.76e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.16e-12,18;CL:0000789,3.16e-12,18;CL:0002420,3.16e-12,18;CL:0002419,3.16e-12,18;CL:0000790,3.16e-12,18;CL:0000084,4.69e-11,25;CL:0000827,4.69e-11,25;CL:0000625,2.78e-08,11;CL:0000037,4.50e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000790;3.02e-12;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.83e-10!94;UBERON:0001016!5.83e-10!94;UBERON:0005743!2.93e-09!86;UBERON:0001017!1.27e-08!82 | |ontology_enrichment_uberon=UBERON:0000073!5.83e-10!94;UBERON:0001016!5.83e-10!94;UBERON:0005743!2.93e-09!86;UBERON:0001017!1.27e-08!82 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.47e-09,89;UBERON:0001017,2.70e-08,81 | |||
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| ||
|short_description=p1@LEPROTL1 | |short_description=p1@LEPROTL1 | ||
}} | }} |
Latest revision as of 22:37, 17 September 2015
Short description: | p1@LEPROTL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LEPROTL1_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | 0bp_to_ENST00000442880, ENST00000518001, ENST00000520682, ENST00000520739, ENST00000523116, NM_001128208, NM_015344, uc003xhw.3, uc003xhx.2_5end |
EntrezGene: | LEPROTL1 |
HGNC: | 6555 |
UniProt: | C9JVM4E5RIQ0E5RHU8E5RIL0E9PHP8O95214Q6FHL7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.16e-12 | 18 |
alpha-beta T cell | 3.16e-12 | 18 |
immature T cell | 3.16e-12 | 18 |
mature T cell | 3.16e-12 | 18 |
immature alpha-beta T cell | 3.16e-12 | 18 |
T cell | 4.69e-11 | 25 |
pro-T cell | 4.69e-11 | 25 |
CD8-positive, alpha-beta T cell | 2.78e-08 | 11 |
hematopoietic stem cell | 4.50e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
nervous system | 5.47e-09 | 89 |
central nervous system | 2.70e-08 | 81 |