FFCP PHASE1:Hg19::chr11:40263097..40263118,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57689 | |EntrezGene=57689 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29317 | |HGNC=29317 | ||
|TSSclassifier=strong | |||
|UniProt=E9PLP4 | |UniProt=E9PLP4 | ||
|association_with_transcript=314bp_to_ENST00000533474_5end | |association_with_transcript=314bp_to_ENST00000533474_5end | ||
|cluster_id=chr11:40263097..40263118,- | |||
|coexpression_cluster_id=C116 | |||
|description=CAGE_peak_19_at_LRRC4C_5end | |description=CAGE_peak_19_at_LRRC4C_5end | ||
|id=chr11:40263097..40263118,- | |id=chr11:40263097..40263118,- | ||
|ontology_enrichment_celltype=CL:0002617!9.74e-14!2;CL:0000945!8.00e-09!24;CL:0000826!8.00e-09!24;CL:0002568!2.66e-07!1;CL:0000946!3.20e-07!1;CL:0000786!3.20e-07!1;CL:0000980!3.20e-07!1;CL:0000306!7.49e-07!4;CL:0002222!7.49e-07!4;CL:0002224!7.49e-07!4 | |ontology_enrichment_celltype=CL:0002617!9.74e-14!2;CL:0000945!8.00e-09!24;CL:0000826!8.00e-09!24;CL:0002568!2.66e-07!1;CL:0000946!3.20e-07!1;CL:0000786!3.20e-07!1;CL:0000980!3.20e-07!1;CL:0000306!7.49e-07!4;CL:0002222!7.49e-07!4;CL:0002224!7.49e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002617;3.81e-21;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002617,3.81e-21,2 | |||
|ontology_enrichment_development_v019=UBERON:0004872;6.21e-07;7 | |||
|ontology_enrichment_disease=DOID:4960!6.59e-08!1;DOID:0070004!6.59e-08!1;DOID:2355!9.10e-08!1;DOID:630!1.03e-07!1;DOID:0050177!1.03e-07!1;DOID:0050427!1.03e-07!1 | |ontology_enrichment_disease=DOID:4960!6.59e-08!1;DOID:0070004!6.59e-08!1;DOID:2355!9.10e-08!1;DOID:630!1.03e-07!1;DOID:0050177!1.03e-07!1;DOID:0050427!1.03e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:4960;6.62e-41;1!DOID:0070004;6.62e-41;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,6.62e-41,1;DOID:0070004,6.62e-41,1 | |||
|ontology_enrichment_uberon=UBERON:0000988!5.51e-09!3;UBERON:0001874!1.72e-07!1;UBERON:0007190!4.09e-07!1;UBERON:0002336!4.34e-07!1;UBERON:0001018!4.34e-07!1;UBERON:0002473!4.34e-07!1;UBERON:0005340!4.34e-07!1;UBERON:0002316!4.34e-07!1;UBERON:0003544!4.34e-07!1;UBERON:0001020!4.34e-07!1;UBERON:0005970!4.34e-07!1;UBERON:0002437!4.34e-07!1;UBERON:0002581!4.61e-07!1;UBERON:0001882!4.90e-07!1;UBERON:0005403!4.90e-07!1;UBERON:0000369!7.49e-07!4;UBERON:0002435!7.49e-07!4;UBERON:0010077!7.49e-07!4;UBERON:0005389!7.49e-07!4;UBERON:0000484!7.49e-07!4;UBERON:0002546!7.49e-07!4;UBERON:0000965!7.49e-07!4;UBERON:0001803!7.49e-07!4;UBERON:0000204!7.49e-07!4;UBERON:0010082!7.49e-07!4;UBERON:0003073!7.49e-07!4;UBERON:0005426!7.49e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.96e-14;3!UBERON:0004177;3.35e-09;5!UBERON:0005057;3.35e-09;5!UBERON:0002405;6.92e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.83e-14,3;UBERON:0004854,1.83e-14,3;UBERON:0009034,1.83e-14,3;UBERON:0002095,1.83e-14,3;UBERON:0004782,1.83e-14,3;UBERON:0003281,1.83e-14,3;UBERON:0009664,1.83e-14,3;UBERON:0002296,1.83e-14,3;UBERON:0005602,1.83e-14,3;UBERON:0001179,1.83e-14,3;UBERON:0006293,1.83e-14,3;UBERON:0004177,6.04e-07,7;UBERON:0005057,6.04e-07,7 | |||
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|short_description=p19@LRRC4C | |short_description=p19@LRRC4C | ||
}} | }} |
Latest revision as of 22:52, 17 September 2015
Short description: | p19@LRRC4C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_LRRC4C_5end |
Coexpression cluster: | C116_myeloma_xeroderma_tonsil_CD19_spleen_lymph_trachea |
Association with transcript: | 314bp_to_ENST00000533474_5end |
EntrezGene: | LRRC4C |
HGNC: | 29317 |
UniProt: | E9PLP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 3.81e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.83e-14 | 3 |
gastrointestinal system mesentery | 1.83e-14 | 3 |
stomach region | 1.83e-14 | 3 |
mesentery | 1.83e-14 | 3 |
gastrointestinal system serosa | 1.83e-14 | 3 |
mesentery of stomach | 1.83e-14 | 3 |
gut mesentery | 1.83e-14 | 3 |
dorsal mesentery | 1.83e-14 | 3 |
dorsal mesogastrium | 1.83e-14 | 3 |
peritoneal cavity | 1.83e-14 | 3 |
spleen primordium | 1.83e-14 | 3 |
hemopoietic organ | 6.04e-07 | 7 |
immune organ | 6.04e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 6.62e-41 | 1 |
myeloma | 6.62e-41 | 1 |