FFCP PHASE1:Hg19::chr16:77822475..77822492,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57687 | |EntrezGene=57687 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29315 | |HGNC=29315 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HCJ6 | |UniProt=Q9HCJ6 | ||
|association_with_transcript=0bp_to_ENST00000302536,NM_020927,uc002ffg.1_5end | |association_with_transcript=0bp_to_ENST00000302536,NM_020927,uc002ffg.1_5end | ||
|cluster_id=chr16:77822475..77822492,+ | |||
|coexpression_cluster_id=C3590 | |||
|description=CAGE_peak_1_at_VAT1L_5end | |description=CAGE_peak_1_at_VAT1L_5end | ||
|id=chr16:77822475..77822492,+ | |id=chr16:77822475..77822492,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.83e-12!180;CL:0000192!5.52e-10!42;CL:0000514!5.52e-10!42;CL:0000393!1.33e-08!60;CL:0000211!1.33e-08!60;CL:0000359!9.48e-08!32;CL:0000183!1.90e-07!59;CL:0002539!2.33e-07!10;CL:0002620!5.01e-07!23 | |ontology_enrichment_celltype=CL:0000055!4.83e-12!180;CL:0000192!5.52e-10!42;CL:0000514!5.52e-10!42;CL:0000393!1.33e-08!60;CL:0000211!1.33e-08!60;CL:0000359!9.48e-08!32;CL:0000183!1.90e-07!59;CL:0002539!2.33e-07!10;CL:0002620!5.01e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000359;7.85e-08;32!CL:0002539;1.10e-07;10!CL:0000192;1.34e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,9.27e-11,43;CL:0000514,9.27e-11,43;CL:0000393,1.86e-08,61;CL:0000211,1.86e-08,61;CL:0000359,2.56e-08,32;CL:0002539,1.11e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;1.34e-07;43!UBERON:0006601;1.59e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000073;6.47e-20;53!UBERON:0002616;6.47e-20;53!UBERON:0003528;6.49e-19;34!UBERON:0002020;6.49e-19;34!UBERON:0001893;1.09e-18;34!UBERON:0001869;1.95e-18;32!UBERON:0002791;2.81e-18;32!UBERON:0002780;1.65e-17;41!UBERON:0001890;1.65e-17;41!UBERON:0000956;1.73e-14;25!UBERON:0000203;1.73e-14;25!UBERON:0001017;2.96e-14;75!UBERON:0002619;2.16e-13;22!UBERON:0000955;2.45e-13;68!UBERON:0004732;1.16e-12;13!UBERON:0001016;1.22e-12;83!UBERON:0001950;1.94e-12;20!UBERON:0004733;1.00e-11;12!UBERON:0002028;1.00e-11;12!UBERON:0000947;2.53e-09;21!UBERON:0010191;2.53e-09;21!UBERON:0000125;3.36e-09;9!UBERON:0002308;3.36e-09;9!UBERON:0002680;7.02e-09;9!UBERON:0001895;7.02e-09;9!UBERON:0001135;7.08e-09;15!UBERON:0002420;1.28e-08;9!UBERON:0007245;1.28e-08;9!UBERON:0010009;1.28e-08;9!UBERON:0010011;1.28e-08;9!UBERON:0000454;1.28e-08;9!UBERON:0004573;1.33e-08;33!UBERON:0004571;1.33e-08;33!UBERON:0004237;1.10e-07;10!UBERON:0004695;1.10e-07;10!UBERON:0002111;1.10e-07;10!UBERON:0004178;1.10e-07;10!UBERON:0009663;2.73e-07;7!UBERON:0002298;3.29e-07;6!UBERON:0001637;9.12e-07;42!UBERON:0003509;9.12e-07;42!UBERON:0004572;9.12e-07;42 | |||
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| ||
|short_description=p1@VAT1L | |short_description=p1@VAT1L | ||
}} | }} |
Latest revision as of 22:52, 17 September 2015
Short description: | p1@VAT1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_VAT1L_5end |
Coexpression cluster: | C3590_teratocarcinoma_medulla_putamen_locus_astrocytoma_retina_caudate |
Association with transcript: | 0bp_to_ENST00000302536, NM_020927, uc002ffg.1_5end |
EntrezGene: | VAT1L |
HGNC: | 29315 |
UniProt: | Q9HCJ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 9.27e-11 | 43 |
smooth muscle myoblast | 9.27e-11 | 43 |
electrically responsive cell | 1.86e-08 | 61 |
electrically active cell | 1.86e-08 | 61 |
vascular associated smooth muscle cell | 2.56e-08 | 32 |
aortic smooth muscle cell | 1.11e-07 | 10 |