FFCP PHASE1:Hg19::chr6:31620403..31620445,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7917 | |EntrezGene=7917 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13919 | |HGNC=13919 | ||
|TSSclassifier=strong | |||
|UniProt=F8VXY4,P46379,F6VEM6,E7EMZ4,F6RG75,F6WML8 | |UniProt=F8VXY4,P46379,F6VEM6,E7EMZ4,F6RG75,F6WML8 | ||
|association_with_transcript=0bp_to_ENST00000362049,ENST00000375964,ENST00000424480,ENST00000439687,ENST00000446826,ENST00000451898,ENST00000474692_5end | |association_with_transcript=0bp_to_ENST00000362049,ENST00000375964,ENST00000424480,ENST00000439687,ENST00000446826,ENST00000451898,ENST00000474692_5end | ||
|cluster_id=chr6:31620403..31620445,- | |||
|description=CAGE_peak_1_at_BAG6_5end | |description=CAGE_peak_1_at_BAG6_5end | ||
|id=chr6:31620403..31620445,- | |id=chr6:31620403..31620445,- | ||
|ontology_enrichment_celltype=CL:0000066!2.95e-08!254;CL:0000115!8.93e-08!35;CL:1000449!9.06e-07!16 | |ontology_enrichment_celltype=CL:0000066!2.95e-08!254;CL:0000115!8.93e-08!35;CL:1000449!9.06e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:1000449;7.20e-08;15!CL:0000115;4.71e-07;36!CL:1000497;8.31e-07;17!CL:0002518;8.31e-07;17!CL:0002681;8.89e-07;12!CL:0002584;8.89e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.67e-08,253;CL:0000115,4.26e-08,36;CL:1000449,7.29e-08,15;CL:1000497,8.18e-07,17;CL:0002518,8.18e-07,17;CL:0002681,9.30e-07,12;CL:0002584,9.30e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!6.46e-12!216;UBERON:0003914!1.01e-08!118;UBERON:0000926!4.26e-07!448;UBERON:0004120!4.26e-07!448;UBERON:0006603!4.26e-07!448;UBERON:0001009!5.74e-07!113;UBERON:0006555!8.96e-07!17;UBERON:0005103!8.96e-07!17;UBERON:0000083!8.96e-07!17;UBERON:0009201!8.96e-07!17;UBERON:0004819!8.96e-07!17;UBERON:0006553!8.96e-07!17;UBERON:0003074!8.96e-07!17;UBERON:0003060!8.96e-07!17;UBERON:0004211!9.06e-07!16;UBERON:0001285!9.06e-07!16;UBERON:0007684!9.06e-07!16;UBERON:0003220!9.06e-07!16;UBERON:0004208!9.06e-07!16 | |ontology_enrichment_uberon=UBERON:0003081!6.46e-12!216;UBERON:0003914!1.01e-08!118;UBERON:0000926!4.26e-07!448;UBERON:0004120!4.26e-07!448;UBERON:0006603!4.26e-07!448;UBERON:0001009!5.74e-07!113;UBERON:0006555!8.96e-07!17;UBERON:0005103!8.96e-07!17;UBERON:0000083!8.96e-07!17;UBERON:0009201!8.96e-07!17;UBERON:0004819!8.96e-07!17;UBERON:0006553!8.96e-07!17;UBERON:0003074!8.96e-07!17;UBERON:0003060!8.96e-07!17;UBERON:0004211!9.06e-07!16;UBERON:0001285!9.06e-07!16;UBERON:0007684!9.06e-07!16;UBERON:0003220!9.06e-07!16;UBERON:0004208!9.06e-07!16 | ||
|ontology_enrichment_uberon_v019=UBERON:0000353;4.93e-08;15!UBERON:0006555;7.20e-08;15!UBERON:0004819;7.20e-08;15!UBERON:0001285;7.20e-08;15!UBERON:0007684;7.20e-08;15!UBERON:0001225;8.89e-07;12!UBERON:0008987;8.89e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,3.45e-10,203;UBERON:0003914,4.27e-09,117;UBERON:0000353,5.23e-08,15;UBERON:0004211,7.29e-08,15;UBERON:0009773,7.29e-08,15;UBERON:0001231,7.29e-08,15;UBERON:0001285,7.29e-08,15;UBERON:0007684,7.29e-08,15;UBERON:0004208,7.29e-08,15;UBERON:0006555,8.02e-08,16;UBERON:0004819,8.02e-08,16;UBERON:0001009,2.19e-07,112;UBERON:0001225,9.30e-07,12;UBERON:0008987,9.30e-07,12 | |||
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|short_description=p1@BAG6 | |short_description=p1@BAG6 | ||
}} | }} |
Latest revision as of 22:53, 17 September 2015
Short description: | p1@BAG6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BAG6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000362049, ENST00000375964, ENST00000424480, ENST00000439687, ENST00000446826, ENST00000451898, ENST00000474692_5end |
EntrezGene: | BAG6 |
HGNC: | 13919 |
UniProt: | F8VXY4P46379F6VEM6E7EMZ4F6RG75F6WML8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.67e-08 | 253 |
endothelial cell | 4.26e-08 | 36 |
epithelial cell of nephron | 7.29e-08 | 15 |
kidney cell | 8.18e-07 | 17 |
kidney epithelial cell | 8.18e-07 | 17 |
kidney cortical cell | 9.30e-07 | 12 |
renal cortical epithelial cell | 9.30e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 3.45e-10 | 203 |
epithelial tube | 4.27e-09 | 117 |
parenchyma | 5.23e-08 | 15 |
nephron epithelium | 7.29e-08 | 15 |
renal tubule | 7.29e-08 | 15 |
nephron tubule | 7.29e-08 | 15 |
nephron | 7.29e-08 | 15 |
uriniferous tubule | 7.29e-08 | 15 |
nephrogenic mesenchyme | 7.29e-08 | 15 |
excretory tube | 8.02e-08 | 16 |
kidney epithelium | 8.02e-08 | 16 |
circulatory system | 2.19e-07 | 112 |
cortex of kidney | 9.30e-07 | 12 |
renal parenchyma | 9.30e-07 | 12 |