FFCP PHASE1:Hg19::chr6:31620403..31620445,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7917 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13919 | |||
|TSSclassifier=strong | |||
|UniProt=F8VXY4,P46379,F6VEM6,E7EMZ4,F6RG75,F6WML8 | |||
|association_with_transcript=0bp_to_ENST00000362049,ENST00000375964,ENST00000424480,ENST00000439687,ENST00000446826,ENST00000451898,ENST00000474692_5end | |||
|cluster_id=chr6:31620403..31620445,- | |||
|description=CAGE_peak_1_at_BAG6_5end | |||
|id=chr6:31620403..31620445,- | |||
|ontology_enrichment_celltype=CL:0000066!2.95e-08!254;CL:0000115!8.93e-08!35;CL:1000449!9.06e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000449;7.20e-08;15!CL:0000115;4.71e-07;36!CL:1000497;8.31e-07;17!CL:0002518;8.31e-07;17!CL:0002681;8.89e-07;12!CL:0002584;8.89e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.67e-08,253;CL:0000115,4.26e-08,36;CL:1000449,7.29e-08,15;CL:1000497,8.18e-07,17;CL:0002518,8.18e-07,17;CL:0002681,9.30e-07,12;CL:0002584,9.30e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!6.46e-12!216;UBERON:0003914!1.01e-08!118;UBERON:0000926!4.26e-07!448;UBERON:0004120!4.26e-07!448;UBERON:0006603!4.26e-07!448;UBERON:0001009!5.74e-07!113;UBERON:0006555!8.96e-07!17;UBERON:0005103!8.96e-07!17;UBERON:0000083!8.96e-07!17;UBERON:0009201!8.96e-07!17;UBERON:0004819!8.96e-07!17;UBERON:0006553!8.96e-07!17;UBERON:0003074!8.96e-07!17;UBERON:0003060!8.96e-07!17;UBERON:0004211!9.06e-07!16;UBERON:0001285!9.06e-07!16;UBERON:0007684!9.06e-07!16;UBERON:0003220!9.06e-07!16;UBERON:0004208!9.06e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0000353;4.93e-08;15!UBERON:0006555;7.20e-08;15!UBERON:0004819;7.20e-08;15!UBERON:0001285;7.20e-08;15!UBERON:0007684;7.20e-08;15!UBERON:0001225;8.89e-07;12!UBERON:0008987;8.89e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,3.45e-10,203;UBERON:0003914,4.27e-09,117;UBERON:0000353,5.23e-08,15;UBERON:0004211,7.29e-08,15;UBERON:0009773,7.29e-08,15;UBERON:0001231,7.29e-08,15;UBERON:0001285,7.29e-08,15;UBERON:0007684,7.29e-08,15;UBERON:0004208,7.29e-08,15;UBERON:0006555,8.02e-08,16;UBERON:0004819,8.02e-08,16;UBERON:0001009,2.19e-07,112;UBERON:0001225,9.30e-07,12;UBERON:0008987,9.30e-07,12 | |||
|phase1_expression=49.4165191615914,58.2353424983474,41.8634580165034,45.0329842589087,41.1204206873105,38.3828950604162,50.6599756336621,63.1719873426831,66.8635208191587,72.2457773314436,247.719414630212,80.8233076881637,82.0315302290491,41.7092609475357,39.7676850873499,53.786011716142,50.0236458259901,61.3460475925393,35.1311615129165,83.4760773760622,94.4523200460891,94.0364164434263,41.7904541211343,57.3503841055385,58.3773274115833,74.9615510387402,76.8461517251492,69.8164630252335,53.4975416514509,36.8476222173324,63.0101621896429,69.8760130603985,102.108806465827,106.119400917868,77.6996021820425,43.0772774436887,44.9208672182316,83.0993112797816,81.0199567779373,77.9069025869908,64.2637411068583,50.5274118989608,56.4090493118869,64.2660215405676,69.5291736387409,53.6110775225074,72.7502885514793,71.1320446277759,76.1877672401955,84.2938709503901,69.4195514693863,61.012415311255,98.5972646906729,78.7491313972268,93.4442757500958,76.2381475147549,71.5014113151556,52.3605718757047,82.3365670477728,62.5811602798383,95.9005688698562,64.9807061367831,66.0224706727602,59.6714650745772,109.989301440233,72.6253087604659,109.616715823221,73.6158589202258,77.1794719261898,54.9487777103945,87.1775283792051,65.1851415697989,70.8875747867581,56.6164167316004,58.466182490387,45.2862674298092,55.7150010486616,65.3269483860552,49.8249318760948,47.8821409485298,56.4923363245416,54.9819102831548,31.6793240030381,42.0526730671841,41.8069349315871,40.1126409212517,41.2407866647093,46.5549476363131,37.0185128759523,25.7594513724548,40.9833337758803,52.2641098540136,48.9309732000293,44.9382517168688,47.082719290449,45.8288307508634,48.3906034480029,55.8075283103814,54.2787957358704,34.1060450596983,34.221837996527,34.0882420129008,60.3962858064525,39.9963540217773,32.9958616371818,33.4516180821268,37.9125409271022,39.1959438360566,38.2374481826042,56.8955149928719,47.8085530769518,62.5974665187713,57.5351865068794,50.2976756808661,76.3109323776331,54.2751751521342,37.9388288665902,35.7372543301935,44.0254264113935,31.8565414324097,35.1585065082466,27.5631092890028,40.2035567937653,44.4113540705832,39.9778324967507,45.2244551404072,29.5606078891577,48.99043860361,44.6625126958457,49.8195949356829,24.3806866313962,59.6923765136236,46.7976976347321,46.9870898099936,61.6645630082144,45.7714999916203,38.9690114055039,55.4763752145005,47.5510130335261,53.880243583403,61.9235239136539,142.177786452767,126.410465037512,88.9882662682631,38.2965924512526,33.25877982416,48.6626135499046,67.7313373027171,64.0634300073743,73.5485852632539,96.7972923875854,63.6573600378532,73.9409268424176,64.4451053793371,76.3488973902029,95.7410785951435,102.1985386365,58.4021875722683,48.7399779880793,62.5927545869933,97.4846947404136,76.7874826775698,111.048236184417,66.1793544622564,90.7358981627571,64.7423030059578,56.3568725291686,48.8733825297618,79.7246514822593,164.222959105286,99.2953452102807,44.8053419282615,58.1670396222488,102.046008201353,38.7638122322348,45.0804621525904,46.4756224654398,66.259259392976,59.584288209324,46.5362408118115,108.883975644299,75.4802698156509,51.3498208409614,56.3090609251296,55.0866613492356,67.0513404467046,61.6508239193599,103.570072870538,53.0672130611545,73.590864979234,59.6300235401686,56.0162558530758,60.8642270824175,57.0230275211129,45.3222260185863,56.626620280725,50.5263069949493,52.2721257204104,46.4861827043687,132.883558842952,136.537446945085,48.6491369327251,61.9336673366223,40.4513608606907,39.5079858792754,40.7628768412696,48.3766549679242,44.0116870660882,81.2635049670545,44.6334942630806,34.9687636913277,89.1270555370675,37.4080681135533,100.995091697887,50.809901778524,71.0548358735731,43.7492153173782,95.9248342127635,36.912009355562,35.0771943296822,99.402685904652,44.7339316130723,55.6158742778399,39.8117357516391,43.9121254151244,42.1602755221836,73.6721185022756,78.5901526146408,87.6102329236169,83.2398271773425,58.2861165522702,45.9871472435546,87.6117381046969,64.3240938192885,99.457143373786,45.5080569471339,35.3720946018097,89.7948612302415,105.365431298814,96.6454229832763,92.3160551770137,100.224544282507,93.247353310661,97.2133731834785,109.687799005068,105.035973846365,113.675940012196,166.887710826101,81.9032282549486,83.7949654897589,65.912618107352,65.8494235174009,56.7158310414148,92.7072508770766,66.1677799361951,50.7840718483636,52.8996375669575,123.641928583382,51.470833874755,59.441781791776,94.1586002346838,81.1149132518071,64.949103911373,55.2988031731116,35.9270604361614,86.4755022088832,111.579508530963,81.4287771564081,115.369842102054,110.744714910239,45.0577121139937,50.0769127397969,62.7223504858433,25.3081351764298,41.6595677933172,41.6818785892616,46.2121977146697,44.4669925926362,105.430236770433,12.3165809473986,50.3637042555653,56.39324742709,63.701019410297,55.9253980078863,78.4198994508288,169.220872522317,218.024451810687,181.336792784068,93.778673345431,46.2528309079633,52.3062371713958,102.936335429041,65.8299703938253,71.3581521037844,37.747341001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| |||
|short_description=p1@BAG6 | |||
}} |
Latest revision as of 22:53, 17 September 2015
Short description: | p1@BAG6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BAG6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000362049, ENST00000375964, ENST00000424480, ENST00000439687, ENST00000446826, ENST00000451898, ENST00000474692_5end |
EntrezGene: | BAG6 |
HGNC: | 13919 |
UniProt: | F8VXY4P46379F6VEM6E7EMZ4F6RG75F6WML8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.67e-08 | 253 |
endothelial cell | 4.26e-08 | 36 |
epithelial cell of nephron | 7.29e-08 | 15 |
kidney cell | 8.18e-07 | 17 |
kidney epithelial cell | 8.18e-07 | 17 |
kidney cortical cell | 9.30e-07 | 12 |
renal cortical epithelial cell | 9.30e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 3.45e-10 | 203 |
epithelial tube | 4.27e-09 | 117 |
parenchyma | 5.23e-08 | 15 |
nephron epithelium | 7.29e-08 | 15 |
renal tubule | 7.29e-08 | 15 |
nephron tubule | 7.29e-08 | 15 |
nephron | 7.29e-08 | 15 |
uriniferous tubule | 7.29e-08 | 15 |
nephrogenic mesenchyme | 7.29e-08 | 15 |
excretory tube | 8.02e-08 | 16 |
kidney epithelium | 8.02e-08 | 16 |
circulatory system | 2.19e-07 | 112 |
cortex of kidney | 9.30e-07 | 12 |
renal parenchyma | 9.30e-07 | 12 |