FFCP PHASE1:Hg19::chr5:42548413..42548417,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2690 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4263 | |||
|TSSclassifier=strong | |||
|UniProt=P10912 | |||
|association_with_transcript=98bp_to_NM_001242403_5end | |||
|cluster_id=chr5:42548413..42548417,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_14_at_GHR_5end | |||
|id=chr5:42548413..42548417,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.94e-14!12;CL:0000417!2.94e-14!12;CL:0000668!2.94e-14!12;CL:0000414!2.94e-14!12;CL:0000412!2.94e-14!12;CL:0000182!2.94e-14!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.57e-17;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.57e-17,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.68e-19!19;UBERON:0006925!1.68e-19!19;UBERON:0008836!1.68e-19!19;UBERON:0008835!5.72e-17!22;UBERON:0003894!5.72e-17!22;UBERON:0009854!2.85e-16!23;UBERON:0007499!4.84e-15!25;UBERON:0009497!4.84e-15!25;UBERON:0000015!4.84e-15!25;UBERON:0002423!4.84e-15!25;UBERON:0006235!4.84e-15!25;UBERON:0004161!4.84e-15!25;UBERON:0005057!1.70e-14!26;UBERON:0009856!1.70e-14!26;UBERON:0002365!2.68e-12!31;UBERON:0002330!2.68e-12!31;UBERON:0002368!5.49e-11!35;UBERON:0000949!1.01e-08!45;UBERON:0003929!2.17e-07!54;UBERON:0005172!2.87e-07!55;UBERON:0005173!2.87e-07!55;UBERON:0002530!8.00e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.72e-11;19!UBERON:0006925;1.72e-11;19!UBERON:0002423;5.49e-09;25!UBERON:0002365;1.17e-07;31!UBERON:0002330;1.17e-07;31!UBERON:0002368;3.57e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.72e-11,19;UBERON:0006925,1.72e-11,19;UBERON:0008836,1.72e-11,19;UBERON:0008835,4.53e-10,22;UBERON:0003894,4.53e-10,22;UBERON:0009854,1.12e-09,23;UBERON:0007499,5.49e-09,25;UBERON:0009497,5.49e-09,25;UBERON:0000015,5.49e-09,25;UBERON:0002423,5.49e-09,25;UBERON:0006235,5.49e-09,25;UBERON:0004161,5.49e-09,25;UBERON:0009856,1.11e-08,26;UBERON:0002365,1.92e-07,31;UBERON:0002330,1.92e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98818933778395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879313402068495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p14@GHR | |||
}} |
Latest revision as of 23:06, 17 September 2015
Short description: | p14@GHR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_GHR_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 98bp_to_NM_001242403_5end |
EntrezGene: | GHR |
HGNC: | 4263 |
UniProt: | P10912 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.57e-17 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.72e-11 | 19 |
digestive gland | 1.72e-11 | 19 |
liver bud | 1.72e-11 | 19 |
hepatic diverticulum | 4.53e-10 | 22 |
liver primordium | 4.53e-10 | 22 |
digestive tract diverticulum | 1.12e-09 | 23 |
epithelial sac | 5.49e-09 | 25 |
epithelium of foregut-midgut junction | 5.49e-09 | 25 |
anatomical boundary | 5.49e-09 | 25 |
hepatobiliary system | 5.49e-09 | 25 |
foregut-midgut junction | 5.49e-09 | 25 |
septum transversum | 5.49e-09 | 25 |
sac | 1.11e-08 | 26 |
exocrine gland | 1.92e-07 | 31 |
exocrine system | 1.92e-07 | 31 |