FFCP PHASE1:Hg19::chr12:26126681..26126692,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11228 | |EntrezGene=11228 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13232 | |HGNC=13232 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NHQ8 | |UniProt=Q8NHQ8 | ||
|association_with_transcript=0bp_to_ENST00000542865,NM_001164747,uc009zjd.1_5end | |association_with_transcript=0bp_to_ENST00000542865,NM_001164747,uc009zjd.1_5end | ||
|cluster_id=chr12:26126681..26126692,+ | |||
|coexpression_cluster_id=C341 | |coexpression_cluster_id=C341 | ||
|description=CAGE_peak_8_at_RASSF8_5end | |description=CAGE_peak_8_at_RASSF8_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000784!5.54e-08!3;CL:1000507!1.24e-07!12;CL:1000494!1.24e-07!12 | |ontology_enrichment_celltype=CL:0000784!5.54e-08!3;CL:1000507!1.24e-07!12;CL:1000494!1.24e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:1000507;3.02e-11;10!CL:1000494;3.02e-11;10!CL:0002681;1.33e-09;12!CL:0002584;1.33e-09;12!CL:1000449;5.93e-08;15!CL:1000497;3.58e-07;17!CL:0002518;3.58e-07;17 | |ontology_enrichment_celltype_v019=CL:1000507;3.02e-11;10!CL:1000494;3.02e-11;10!CL:0002681;1.33e-09;12!CL:0002584;1.33e-09;12!CL:1000449;5.93e-08;15!CL:1000497;3.58e-07;17!CL:0002518;3.58e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:1000507,3.02e-11,10;CL:1000494,3.02e-11,10;CL:0002681,1.33e-09,12;CL:0002584,1.33e-09,12;CL:1000449,5.93e-08,15;CL:1000497,3.58e-07,17;CL:0002518,3.58e-07,17 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002336!7.72e-21!1;UBERON:0001018!7.72e-21!1;UBERON:0002473!7.72e-21!1;UBERON:0005340!7.72e-21!1;UBERON:0002316!7.72e-21!1;UBERON:0003544!7.72e-21!1;UBERON:0001020!7.72e-21!1;UBERON:0005970!7.72e-21!1;UBERON:0002437!7.72e-21!1;UBERON:0001954!3.02e-11!2;UBERON:0003022!3.02e-11!2;UBERON:0002421!3.02e-11!2;UBERON:0002600!3.02e-11!2;UBERON:0005162!4.09e-11!2;UBERON:0000122!4.09e-11!2;UBERON:0009773!1.24e-07!12;UBERON:0001231!1.24e-07!12;UBERON:0004810!1.24e-07!12 | |ontology_enrichment_uberon=UBERON:0002336!7.72e-21!1;UBERON:0001018!7.72e-21!1;UBERON:0002473!7.72e-21!1;UBERON:0005340!7.72e-21!1;UBERON:0002316!7.72e-21!1;UBERON:0003544!7.72e-21!1;UBERON:0001020!7.72e-21!1;UBERON:0005970!7.72e-21!1;UBERON:0002437!7.72e-21!1;UBERON:0001954!3.02e-11!2;UBERON:0003022!3.02e-11!2;UBERON:0002421!3.02e-11!2;UBERON:0002600!3.02e-11!2;UBERON:0005162!4.09e-11!2;UBERON:0000122!4.09e-11!2;UBERON:0009773!1.24e-07!12;UBERON:0001231!1.24e-07!12;UBERON:0004810!1.24e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;3.02e-11;10!UBERON:0009773;3.02e-11;10!UBERON:0001231;3.02e-11;10!UBERON:0004810;3.02e-11;10!UBERON:0001225;1.33e-09;12!UBERON:0008987;1.33e-09;12!UBERON:0001851;5.93e-08;15!UBERON:0006555;5.93e-08;15!UBERON:0000353;5.93e-08;15!UBERON:0004819;5.93e-08;15!UBERON:0001285;5.93e-08;15!UBERON:0007684;5.93e-08;15 | |ontology_enrichment_uberon_v019=UBERON:0004211;3.02e-11;10!UBERON:0009773;3.02e-11;10!UBERON:0001231;3.02e-11;10!UBERON:0004810;3.02e-11;10!UBERON:0001225;1.33e-09;12!UBERON:0008987;1.33e-09;12!UBERON:0001851;5.93e-08;15!UBERON:0006555;5.93e-08;15!UBERON:0000353;5.93e-08;15!UBERON:0004819;5.93e-08;15!UBERON:0001285;5.93e-08;15!UBERON:0007684;5.93e-08;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,3.02e-11,10;UBERON:0001225,1.33e-09,12;UBERON:0008987,1.33e-09,12;UBERON:0001851,5.93e-08,15;UBERON:0004211,5.93e-08,15;UBERON:0009773,5.93e-08,15;UBERON:0000353,5.93e-08,15;UBERON:0001231,5.93e-08,15;UBERON:0001285,5.93e-08,15;UBERON:0007684,5.93e-08,15;UBERON:0004208,5.93e-08,15;UBERON:0006555,1.54e-07,16;UBERON:0004819,1.54e-07,16 | |||
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|short_description=p8@RASSF8 | |short_description=p8@RASSF8 | ||
}} | }} |
Latest revision as of 23:10, 17 September 2015
Short description: | p8@RASSF8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RASSF8_5end |
Coexpression cluster: | C341_giant_large_Fibroblast_Mesenchymal_Alveolar_Mesothelial_mesothelioma |
Association with transcript: | 0bp_to_ENST00000542865, NM_001164747, uc009zjd.1_5end |
EntrezGene: | RASSF8 |
HGNC: | 13232 |
UniProt: | Q8NHQ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 3.02e-11 | 10 |
nephron tubule epithelial cell | 3.02e-11 | 10 |
kidney cortical cell | 1.33e-09 | 12 |
renal cortical epithelial cell | 1.33e-09 | 12 |
epithelial cell of nephron | 5.93e-08 | 15 |
kidney cell | 3.58e-07 | 17 |
kidney epithelial cell | 3.58e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 3.02e-11 | 10 |
cortex of kidney | 1.33e-09 | 12 |
renal parenchyma | 1.33e-09 | 12 |
cortex | 5.93e-08 | 15 |
nephron epithelium | 5.93e-08 | 15 |
renal tubule | 5.93e-08 | 15 |
parenchyma | 5.93e-08 | 15 |
nephron tubule | 5.93e-08 | 15 |
nephron | 5.93e-08 | 15 |
uriniferous tubule | 5.93e-08 | 15 |
nephrogenic mesenchyme | 5.93e-08 | 15 |
excretory tube | 1.54e-07 | 16 |
kidney epithelium | 1.54e-07 | 16 |