FFCP PHASE1:Hg19::chr13:75890666..75890681,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9882 | |EntrezGene=9882 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19165 | |HGNC=19165 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=6bp_to_ENST00000493487_5end | |association_with_transcript=6bp_to_ENST00000493487_5end | ||
|cluster_id=chr13:75890666..75890681,- | |||
|coexpression_cluster_id=C144 | |||
|description=CAGE_peak_23_at_TBC1D4_5end | |description=CAGE_peak_23_at_TBC1D4_5end | ||
|id=chr13:75890666..75890681,- | |id=chr13:75890666..75890681,- | ||
|ontology_enrichment_celltype=CL:0000624!3.61e-12!6 | |ontology_enrichment_celltype=CL:0000624!3.61e-12!6 | ||
|ontology_enrichment_celltype_v019=CL:0000815;2.37e-15;2!CL:0000792;2.37e-15;2!CL:0002677;2.37e-15;2!CL:0000898;1.09e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,2.37e-15,2;CL:0000792,2.37e-15,2;CL:0002677,2.37e-15,2;CL:0000898,1.09e-10,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!8.12e-10!7;UBERON:0007023!1.70e-08!115 | |ontology_enrichment_uberon=UBERON:0004177!8.12e-10!7;UBERON:0007023!1.70e-08!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p23@TBC1D4 | |short_description=p23@TBC1D4 | ||
}} | }} |
Latest revision as of 23:32, 17 September 2015
Short description: | p23@TBC1D4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_TBC1D4_5end |
Coexpression cluster: | C144_CD4_tonsil_NK_appendix_CD8_splenic_mycosis |
Association with transcript: | 6bp_to_ENST00000493487_5end |
EntrezGene: | TBC1D4 |
HGNC: | 19165 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 2.37e-15 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.37e-15 | 2 |
naive regulatory T cell | 2.37e-15 | 2 |
naive T cell | 1.09e-10 | 3 |