FFCP PHASE1:Hg19::chr21:27945502..27945527,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=116159 | |EntrezGene=116159 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=16274 | |HGNC=16274 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=A8MTU9 | |UniProt=A8MTU9 | ||
|association_with_transcript=-7bp_to_ENST00000400043_5end | |association_with_transcript=-7bp_to_ENST00000400043_5end | ||
|cluster_id=chr21:27945502..27945527,- | |||
|coexpression_cluster_id=C1876 | |coexpression_cluster_id=C1876 | ||
|description=CAGE_peak_3_at_CYYR1_5end | |description=CAGE_peak_3_at_CYYR1_5end | ||
Latest revision as of 23:32, 17 September 2015
| Short description: | p3@CYYR1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_CYYR1_5end |
| Coexpression cluster: | C1876_neuroectodermal_breast_Hepatic_acute_left_Endothelial_spleen |
| Association with transcript: | -7bp_to_ENST00000400043_5end |
| EntrezGene: | CYYR1 |
| HGNC: | 16274 |
| UniProt: | A8MTU9 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@CYYR1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| endothelial cell | 2.96e-13 | 36 |
| endothelial cell of vascular tree | 2.29e-09 | 24 |
| meso-epithelial cell | 2.53e-09 | 45 |
| glomerular endothelial cell | 6.61e-08 | 5 |
| blood vessel endothelial cell | 4.83e-07 | 18 |
| embryonic blood vessel endothelial progenitor cell | 4.83e-07 | 18 |
Showing 1 to 6 of 6 entries
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 4.25e-26 | 114 |
| intraembryonic coelom | 2.14e-09 | 12 |
| compound organ | 3.14e-08 | 68 |
| urogenital ridge | 7.11e-08 | 11 |
| mesonephros | 1.01e-07 | 9 |
| pronephros | 1.01e-07 | 9 |
| nephrogenic cord | 1.01e-07 | 9 |
| pronephric mesoderm | 1.01e-07 | 9 |
| rostral part of nephrogenic cord | 1.01e-07 | 9 |
| presumptive pronephric mesoderm | 1.01e-07 | 9 |
Showing 1 to 10 of 15 entries
