FFCP PHASE1:Hg19::chr13:75900924..75900937,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9882 | |EntrezGene=9882 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=19165 | |HGNC=19165 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-399bp_to_AY211910_5end | |association_with_transcript=-399bp_to_AY211910_5end | ||
|cluster_id=chr13:75900924..75900937,- | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_12_at_TBC1D4_5end | |description=CAGE_peak_12_at_TBC1D4_5end | ||
|id=chr13:75900924..75900937,- | |id=chr13:75900924..75900937,- | ||
|ontology_enrichment_celltype=CL:0000791!6.85e-19!18;CL:0000789!6.85e-19!18;CL:0002420!6.85e-19!18;CL:0002419!6.85e-19!18;CL:0000790!6.85e-19!18;CL:0000838!8.83e-19!52;CL:0000542!3.47e-18!53;CL:0000051!3.47e-18!53;CL:0000084!1.14e-16!25;CL:0000827!1.14e-16!25;CL:0000625!2.16e-13!11;CL:0000738!2.47e-12!140;CL:0002087!5.88e-12!119;CL:0000037!2.01e-11!172;CL:0000566!2.01e-11!172;CL:0002032!1.09e-10!165;CL:0000837!1.09e-10!165;CL:0002139!1.53e-10!24;CL:0000988!2.34e-10!182;CL:0002031!6.78e-10!124;CL:0000115!2.38e-09!35;CL:0000624!1.21e-08!6;CL:0002078!1.32e-07!44;CL:0000071!1.84e-07!18;CL:0002546!1.84e-07!18;CL:0000213!2.33e-07!57;CL:0000215!2.33e-07!57 | |ontology_enrichment_celltype=CL:0000791!6.85e-19!18;CL:0000789!6.85e-19!18;CL:0002420!6.85e-19!18;CL:0002419!6.85e-19!18;CL:0000790!6.85e-19!18;CL:0000838!8.83e-19!52;CL:0000542!3.47e-18!53;CL:0000051!3.47e-18!53;CL:0000084!1.14e-16!25;CL:0000827!1.14e-16!25;CL:0000625!2.16e-13!11;CL:0000738!2.47e-12!140;CL:0002087!5.88e-12!119;CL:0000037!2.01e-11!172;CL:0000566!2.01e-11!172;CL:0002032!1.09e-10!165;CL:0000837!1.09e-10!165;CL:0002139!1.53e-10!24;CL:0000988!2.34e-10!182;CL:0002031!6.78e-10!124;CL:0000115!2.38e-09!35;CL:0000624!1.21e-08!6;CL:0002078!1.32e-07!44;CL:0000071!1.84e-07!18;CL:0002546!1.84e-07!18;CL:0000213!2.33e-07!57;CL:0000215!2.33e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.87e-46;18!CL:0000789;4.87e-46;18!CL:0002419;4.87e-46;18!CL:0000084;9.18e-40;25!CL:0000625;3.17e-31;11!CL:0000624;2.23e-19;6!CL:0000542;8.26e-14;53!CL:0000898;1.74e-10;3!CL:0000226;2.41e-09;3!CL:0000842;2.41e-09;3!CL:0000623;4.62e-09;3!CL:0002087;1.26e-07;104!CL:0000815;1.62e-07;2!CL:0000792;1.62e-07;2!CL:0002677;1.62e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.86e-46,18;CL:0000789,3.86e-46,18;CL:0002420,3.86e-46,18;CL:0002419,3.86e-46,18;CL:0000790,3.86e-46,18;CL:0000084,8.19e-40,25;CL:0000827,8.19e-40,25;CL:0000625,2.41e-31,11;CL:0000838,3.95e-27,52;CL:0000542,1.71e-26,53;CL:0000051,1.71e-26,53;CL:0000624,2.30e-19,6;CL:0002087,7.01e-18,115;CL:0000738,6.93e-14,136;CL:0002031,4.02e-13,120;CL:0000037,1.28e-10,168;CL:0000898,1.55e-10,3;CL:0000988,1.10e-09,177;CL:0000226,1.92e-09,3;CL:0000842,1.92e-09,3;CL:0000623,4.58e-09,3;CL:0000825,4.58e-09,3;CL:0002032,8.36e-09,161;CL:0000837,8.36e-09,161;CL:0000815,1.49e-07,2;CL:0000792,1.49e-07,2;CL:0002677,1.49e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;4.87e-46;18!CL:0000051;8.26e-14;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.84e-07!18;UBERON:0004638!1.84e-07!18;UBERON:0004852!1.84e-07!18 | |ontology_enrichment_uberon=UBERON:0001986!1.84e-07!18;UBERON:0004638!1.84e-07!18;UBERON:0004852!1.84e-07!18 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0.223915474239924,0,0,0,0,0,0,0,0.619412741790207,0,0,1.6553756092201,0,0,1.35426486594342,0.188242339542605,0,0.224723484445085,0,0,1.27867425159808,0,0.398927315243264,0.426224750532694,0,0,1.24564449799115,0.251248665256743,0,0.65156653411535,0,0,2.53169909952708,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,0.889509253863555,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0,4.13090517239049,7.07419372948497,5.14003747498773,7.18901930179916,3.91106719960308,5.6813736688168,7.79306913631645,3.89936599098108,6.18672405697158,7.53215241584312,8.6657236404805,7.55738786381483,8.32379824383221,1.64437904603676,3.03985019564433,2.02862160014537,4.74517002118593,7.22360235842225,6.27213142829861,1.81294948316106,5.74830740402882,2.74901956386104,3.03623630423403,2.54852331459277,1.30216690771284,4.75226022224187,3.16207750063323,2.68771883424279,3.74792179657038,3.31488152861624,3.28451198768419,1.00803371612366,1.87208137048455,1.73789284659359,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0.79504962946682,0,0.694281003215189,0,0,0.825354125820202,0.417989933073621,0.258416759169329,1.06729878806013,1.67360306382335,0.402829317109147,1.52054421143703,0.488124115096339,1.10298924103761,0.81014194788176,2.32179293538607,0.898117490504679,0.675668882899933,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0.269421344139376,0.326923806226917,0.151357427644931,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0.721832238805369,0,1.52203321787679,0,0,0,0,0,0,0,0,0.0895585227028483,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0.845302752556,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77327684181734,1.50939302401662,1.02674429023799,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,1.6541442089831,2.37285620900479,1.38745825144478,0,0,0,0,0.153461973288062,0,0.256278298511402,0,0.321707842287215,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36074964221213,0.863663664408557,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,1.19115887728894,0.822724546172388,1.94541993357815,1.08006287447623,0,0,0,0,0,0,0,1.11598390910176,0,0,0.423347165447766,0,0.842391534340376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0.66614393599564,1.4098700508785,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0.552567831062295,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0.23056390438806,0,0,0,0,0.533034776018635,0,0,0.166211681900156,0,0,0.167821586975843,0,0.953619473882272,0,0,0.141353071433941,0,1.99052386215701,0.176915129006678,1.83309043480088,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0.063186579628488,0,0,0,0.661983911750998,0,0,0,0,0,0,0.34823682632161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0.136203406111576,0,0,0,0.2249738915515,0.77380195455795,0.0607495566580247,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0.992332043623902,0,1.09613338542806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36484205787483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0.214441591374926,0.260994291965212,0.453411851024545,0.231522474323834,0,0,0.308801447160972,0,0.176689145945881,0,0,0,0.690860683462397,0,0,0.779441235357554,0.265729680626726,0.490696182767533,0.982829546539238,0,0,1.59989916683944,0,0.516644938982447,0.567515953566836,0,0,0,0,0.323474434190045,0.157265941855896,0,0.33946505990805,1.06287460050841,0.371807292777007,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0.879356221798103,0,0,0,0,0,0.887023701626388,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.4582137370881,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0.297046400327086,0,0,0.375935671919414,0.773494655682926,0,0,0,0,0,0,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.426467963801962,0,0.645889098360061,0.682821857254437,0,0,0.202117188958219,0,1.02669990325584,1.01028079521881,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.488965776731466,1.22068853494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722,0,0.603821380773079,0.961705476909699 | ||
|short_description=p12@TBC1D4 | |short_description=p12@TBC1D4 | ||
}} | }} |
Latest revision as of 23:37, 17 September 2015
Short description: | p12@TBC1D4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_TBC1D4_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -399bp_to_AY211910_5end |
EntrezGene: | TBC1D4 |
HGNC: | 19165 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.86e-46 | 18 |
alpha-beta T cell | 3.86e-46 | 18 |
immature T cell | 3.86e-46 | 18 |
mature T cell | 3.86e-46 | 18 |
immature alpha-beta T cell | 3.86e-46 | 18 |
T cell | 8.19e-40 | 25 |
pro-T cell | 8.19e-40 | 25 |
CD8-positive, alpha-beta T cell | 2.41e-31 | 11 |
lymphoid lineage restricted progenitor cell | 3.95e-27 | 52 |
lymphocyte | 1.71e-26 | 53 |
common lymphoid progenitor | 1.71e-26 | 53 |
CD4-positive, alpha-beta T cell | 2.30e-19 | 6 |
nongranular leukocyte | 7.01e-18 | 115 |
leukocyte | 6.93e-14 | 136 |
hematopoietic lineage restricted progenitor cell | 4.02e-13 | 120 |
hematopoietic stem cell | 1.28e-10 | 168 |
naive T cell | 1.55e-10 | 3 |
hematopoietic cell | 1.10e-09 | 177 |
single nucleate cell | 1.92e-09 | 3 |
mononuclear cell | 1.92e-09 | 3 |
natural killer cell | 4.58e-09 | 3 |
pro-NK cell | 4.58e-09 | 3 |
hematopoietic oligopotent progenitor cell | 8.36e-09 | 161 |
hematopoietic multipotent progenitor cell | 8.36e-09 | 161 |
regulatory T cell | 1.49e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.49e-07 | 2 |
naive regulatory T cell | 1.49e-07 | 2 |