FFCP PHASE1:Hg19::chr13:75900938..75900949,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9882 | |EntrezGene=9882 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=19165 | |HGNC=19165 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-413bp_to_AY211910_5end | |association_with_transcript=-413bp_to_AY211910_5end | ||
|cluster_id=chr13:75900938..75900949,- | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_13_at_TBC1D4_5end | |description=CAGE_peak_13_at_TBC1D4_5end | ||
|id=chr13:75900938..75900949,- | |id=chr13:75900938..75900949,- | ||
|ontology_enrichment_celltype=CL:0000084!8.98e-21!25;CL:0000827!8.98e-21!25;CL:0000791!2.42e-18!18;CL:0000789!2.42e-18!18;CL:0002420!2.42e-18!18;CL:0002419!2.42e-18!18;CL:0000790!2.42e-18!18;CL:0002139!5.64e-15!24;CL:0000838!2.87e-14!52;CL:0000542!7.97e-14!53;CL:0000051!7.97e-14!53;CL:0000115!1.82e-12!35;CL:0000625!1.05e-11!11;CL:0000071!3.68e-11!18;CL:0002546!3.68e-11!18;CL:0000624!7.56e-10!6;CL:0002078!1.20e-09!44;CL:0002087!8.66e-09!119;CL:0000213!2.21e-08!57;CL:0000215!2.21e-08!57;CL:0000738!2.41e-08!140;CL:1000413!3.35e-08!9;CL:0002031!8.99e-08!124;CL:0000037!1.51e-07!172;CL:0000566!1.51e-07!172;CL:0000988!6.02e-07!182;CL:0002032!7.09e-07!165;CL:0000837!7.09e-07!165 | |ontology_enrichment_celltype=CL:0000084!8.98e-21!25;CL:0000827!8.98e-21!25;CL:0000791!2.42e-18!18;CL:0000789!2.42e-18!18;CL:0002420!2.42e-18!18;CL:0002419!2.42e-18!18;CL:0000790!2.42e-18!18;CL:0002139!5.64e-15!24;CL:0000838!2.87e-14!52;CL:0000542!7.97e-14!53;CL:0000051!7.97e-14!53;CL:0000115!1.82e-12!35;CL:0000625!1.05e-11!11;CL:0000071!3.68e-11!18;CL:0002546!3.68e-11!18;CL:0000624!7.56e-10!6;CL:0002078!1.20e-09!44;CL:0002087!8.66e-09!119;CL:0000213!2.21e-08!57;CL:0000215!2.21e-08!57;CL:0000738!2.41e-08!140;CL:1000413!3.35e-08!9;CL:0002031!8.99e-08!124;CL:0000037!1.51e-07!172;CL:0000566!1.51e-07!172;CL:0000988!6.02e-07!182;CL:0002032!7.09e-07!165;CL:0000837!7.09e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.62e-31;18!CL:0000789;1.62e-31;18!CL:0002419;1.62e-31;18!CL:0000624;4.99e-30;6!CL:0000084;2.95e-26;25!CL:0000898;5.56e-16;3!CL:0000815;1.40e-11;2!CL:0000792;1.40e-11;2!CL:0002677;1.40e-11;2!CL:0000625;4.48e-11;11!CL:0002188;3.49e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.72e-32,18;CL:0000789,9.72e-32,18;CL:0002420,9.72e-32,18;CL:0002419,9.72e-32,18;CL:0000790,9.72e-32,18;CL:0000624,2.50e-30,6;CL:0000084,2.59e-26,25;CL:0000827,2.59e-26,25;CL:0000898,4.02e-16,3;CL:0000815,1.33e-11,2;CL:0000792,1.33e-11,2;CL:0002677,1.33e-11,2;CL:0000838,2.30e-11,52;CL:0000625,4.17e-11,11;CL:0000542,4.19e-11,53;CL:0000051,4.19e-11,53;CL:0002188,4.99e-09,5 | |||
|ontology_enrichment_development_v019=CL:0000790;1.62e-31;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!3.68e-11!18;UBERON:0004638!3.68e-11!18;UBERON:0004852!3.68e-11!18;UBERON:0000487!2.01e-08!22;UBERON:0003915!3.35e-08!9;UBERON:0004700!3.35e-08!9;UBERON:0001917!3.35e-08!9;UBERON:0000178!7.51e-08!15;UBERON:0000179!7.51e-08!15;UBERON:0000463!7.51e-08!15;UBERON:0006914!5.69e-07!25 | |ontology_enrichment_uberon=UBERON:0001986!3.68e-11!18;UBERON:0004638!3.68e-11!18;UBERON:0004852!3.68e-11!18;UBERON:0000487!2.01e-08!22;UBERON:0003915!3.35e-08!9;UBERON:0004700!3.35e-08!9;UBERON:0001917!3.35e-08!9;UBERON:0000178!7.51e-08!15;UBERON:0000179!7.51e-08!15;UBERON:0000463!7.51e-08!15;UBERON:0006914!5.69e-07!25 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p13@TBC1D4 | |short_description=p13@TBC1D4 | ||
}} | }} |
Latest revision as of 23:38, 17 September 2015
Short description: | p13@TBC1D4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_TBC1D4_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -413bp_to_AY211910_5end |
EntrezGene: | TBC1D4 |
HGNC: | 19165 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 9.72e-32 | 18 |
alpha-beta T cell | 9.72e-32 | 18 |
immature T cell | 9.72e-32 | 18 |
mature T cell | 9.72e-32 | 18 |
immature alpha-beta T cell | 9.72e-32 | 18 |
CD4-positive, alpha-beta T cell | 2.50e-30 | 6 |
T cell | 2.59e-26 | 25 |
pro-T cell | 2.59e-26 | 25 |
naive T cell | 4.02e-16 | 3 |
regulatory T cell | 1.33e-11 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.33e-11 | 2 |
naive regulatory T cell | 1.33e-11 | 2 |
lymphoid lineage restricted progenitor cell | 2.30e-11 | 52 |
CD8-positive, alpha-beta T cell | 4.17e-11 | 11 |
lymphocyte | 4.19e-11 | 53 |
common lymphoid progenitor | 4.19e-11 | 53 |
glomerular endothelial cell | 4.99e-09 | 5 |