FFCP PHASE1:Hg19::chr1:39794062..39794114,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:39794062..39794114,+ to FFCP PHASE1:Hg19::chr1:39794062..39794114,+: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23499 | |EntrezGene=23499 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13664 | |HGNC=13664 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=21bp_to_ENST00000528611_5end | |||
|cluster_id=chr1:39794062..39794114,+ | |||
|coexpression_cluster_id=C46 | |||
|description=CAGE_peak_14_at_MACF1_5end | |||
|id=chr1:39794062..39794114,+ | |||
|ontology_enrichment_celltype=CL:0000791!3.07e-17!18;CL:0000789!3.07e-17!18;CL:0002420!3.07e-17!18;CL:0002419!3.07e-17!18;CL:0000790!3.07e-17!18;CL:0000084!3.67e-16!25;CL:0000827!3.67e-16!25;CL:0000625!3.82e-14!11;CL:0000542!3.80e-07!53;CL:0000051!3.80e-07!53;CL:0000838!8.64e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000084;4.60e-32;25!CL:0000791;2.39e-31;18!CL:0000789;2.39e-31;18!CL:0002419;2.39e-31;18!CL:0000625;4.31e-30;11!CL:0000623;7.36e-10;3!CL:0000542;1.21e-09;53!CL:0000226;1.02e-08;3!CL:0000842;1.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,3.62e-32,25;CL:0000827,3.62e-32,25;CL:0000791,1.71e-31,18;CL:0000789,1.71e-31,18;CL:0002420,1.71e-31,18;CL:0002419,1.71e-31,18;CL:0000790,1.71e-31,18;CL:0000625,3.95e-30,11;CL:0000838,1.53e-18,52;CL:0000542,4.42e-18,53;CL:0000051,4.42e-18,53;CL:0002087,4.14e-12,115;CL:0000738,8.08e-12,136;CL:0000623,7.38e-10,3;CL:0000825,7.38e-10,3;CL:0000226,1.31e-08,3;CL:0000842,1.31e-08,3;CL:0002031,1.61e-08,120;CL:0000037,4.34e-08,168;CL:0000988,2.65e-07,177;CL:0000624,8.33e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;2.39e-31;18!CL:0000051;1.21e-09;53!UBERON:0007297;9.08e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.39e-27!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.75e-13;15!UBERON:0000179;6.75e-13;15!UBERON:0000463;6.75e-13;15!UBERON:0006947;2.00e-09;3!UBERON:0004054;2.00e-09;3!UBERON:0005904;3.83e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.92e-13,15;UBERON:0000179,8.92e-13,15;UBERON:0000463,8.92e-13,15;UBERON:0007023,1.75e-10,114;UBERON:0006947,1.92e-09,3;UBERON:0004054,1.92e-09,3;UBERON:0005904,3.72e-07,4 | |||
|phase1_expression=0,0,0.281908808191942,0,0.893922188854576,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,0,0,0,0.393364276848904,11.1310525448192,1.08371286321253,0,0,0,0,0,0,1.66198622559563,3.81034450193269,1.95309783644267,0,1.29557466407592,0.257575567634187,0,0,0.242584061187816,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,1.7703879310245,1.57204305099666,1.85041349099558,0,0,0,0,0.891283655081389,0.294605907474837,0.221533894583621,2.70803863765016,0.128091319725675,0.650296737799391,0,0.276350017785848,0,0.296573126324121,0,0,2.94604291013672,2.29932296161153,3.77990190030893,9.1087089127021,3.18565414324097,7.1619179924206,3.8018081777935,7.67933107296641,8.70308955850045,4.99722906209383,5.44587679701239,6.56902397536837,12.2980113367087,9.36040685242276,5.06885413589796,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.358779271377724,0,0,0,0,0,0,0,0,0.252433774244115,0.0920498986422993,0,0.710019185033229,0.10075209822764,0.169560592310488,0,0,0,0,0.132529768321485,0.116193942869518,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7658523976586,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,2.92531928243358,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,12.4129378927214,14.0157923658686,8.08561128562415,0,1.30139853857622,0,0.167516265334349,0,0,0,0.414415513436035,0,0,0,0.831883446123229,0,0,0,0,0,0,0,0,0,0,0,3.51505644408909,1.07857100409308,6.83056369942044,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,1.24644849905432,0,0,0,0,0,0,0,0,0,0,1.8532421910392,0,0,0,0.571890581771475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.811641507850816,0.92947049429925,0.281695602532241,0,0.0982490410131212,1.78335525740625,0,0.211107635297664,0,0,0,0,0,0,0.282431402330337,0,0,0,0,2.02979043692868,0,2.84823593587081,3.33524485640905,4.52498500394814,0,2.16012574895246,0,0,0,0,0.185803175125719,0,100.381140964612,68.0750184552071,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59022384726391,1.65770349318689,0,0,0,0.311039587661807,0,0,0,2.07151151837561,2.3948309234694,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,1.77148277162768,0,0,0,0.295547618953547,0.219385397153973,0,0,3.30886111566327,0,0,0,0.108647371922008,0,1.37396390102793,0,4.08773192782946,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0,0,0,0,0,0,0,0,7.49710365413842,1.20990716048664,0,1.89559738885464,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,4.89234671077684,0,0,0,0,1.35784623083787,0,0.90392296312213,0,0,0.0633107959558787,0,0,2.34798294213288,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0.279282401272254,2.06244381610515,0,0,0,0,0.134366944973453,1.08089965062721,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0.160753148465019,0.275078873194468,0,0,0,0.121499113316049,0,1.97014268247995,0.262272940674991,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.213574825135389,0.628817220398664,1.24271716604159,0.992332043623902,0,0,0,0,0.7520696820681,0,0,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.332787154610557,0.248385611765534,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621051827505038,0,0,6.26094074174081,0,0,0,0.363697318405119,0,0,2.3885753321917,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.132864840313363,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0,0,0,0.484426936895553,0,0,0,0,0,0,0,0,2.632361492224,0,0,0,0,0,0.135075169236789,0,0,0.19024743058172,0,0,4.46590060550365,0.175871244359621,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0.135939465953663,0.0657727735628491,0,0,1.49136876415977,0,0,0.913158720509496,0,0,1.28657779517981,0,0,0,0,0.207216164163037,0,0,0,0,0,6.35080575286394,0,0,0,0,0,0,0.647428837187895,0.410651227424988,0,0.485710993059139,0,0,0,0,0,0,0.463044948647668,0.655678681511872,0,4.4126697915703,0,0.392616934229891,0.297046400327086,0,0,3.19545321131502,0.322289439867886,0.0999411559249289,0,0,0,2.92134555298607,0.458729283404541,0.143339583151451,0,0.0679914901909147,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,2.57647573942014,0.535928260312357,0,0.103432995861895,0.852935927603924,0.23806443146374,0.516711278688049,0.806971285846153,0,0,0,0.653150243690884,0.342233301085281,0.740872583160463,0.645499848534087,0,0,0,0,0,7.03922827210363,2.2003459952916,2.44137706989443,0.665756774185513,0.402547587182052,0 | |phase1_expression=0,0,0.281908808191942,0,0.893922188854576,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,0,0,0,0.393364276848904,11.1310525448192,1.08371286321253,0,0,0,0,0,0,1.66198622559563,3.81034450193269,1.95309783644267,0,1.29557466407592,0.257575567634187,0,0,0.242584061187816,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,1.7703879310245,1.57204305099666,1.85041349099558,0,0,0,0,0.891283655081389,0.294605907474837,0.221533894583621,2.70803863765016,0.128091319725675,0.650296737799391,0,0.276350017785848,0,0.296573126324121,0,0,2.94604291013672,2.29932296161153,3.77990190030893,9.1087089127021,3.18565414324097,7.1619179924206,3.8018081777935,7.67933107296641,8.70308955850045,4.99722906209383,5.44587679701239,6.56902397536837,12.2980113367087,9.36040685242276,5.06885413589796,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.358779271377724,0,0,0,0,0,0,0,0,0.252433774244115,0.0920498986422993,0,0.710019185033229,0.10075209822764,0.169560592310488,0,0,0,0,0.132529768321485,0.116193942869518,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7658523976586,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,2.92531928243358,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,12.4129378927214,14.0157923658686,8.08561128562415,0,1.30139853857622,0,0.167516265334349,0,0,0,0.414415513436035,0,0,0,0.831883446123229,0,0,0,0,0,0,0,0,0,0,0,3.51505644408909,1.07857100409308,6.83056369942044,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,1.24644849905432,0,0,0,0,0,0,0,0,0,0,1.8532421910392,0,0,0,0.571890581771475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.811641507850816,0.92947049429925,0.281695602532241,0,0.0982490410131212,1.78335525740625,0,0.211107635297664,0,0,0,0,0,0,0.282431402330337,0,0,0,0,2.02979043692868,0,2.84823593587081,3.33524485640905,4.52498500394814,0,2.16012574895246,0,0,0,0,0.185803175125719,0,100.381140964612,68.0750184552071,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59022384726391,1.65770349318689,0,0,0,0.311039587661807,0,0,0,2.07151151837561,2.3948309234694,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,1.77148277162768,0,0,0,0.295547618953547,0.219385397153973,0,0,3.30886111566327,0,0,0,0.108647371922008,0,1.37396390102793,0,4.08773192782946,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0,0,0,0,0,0,0,0,7.49710365413842,1.20990716048664,0,1.89559738885464,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,4.89234671077684,0,0,0,0,1.35784623083787,0,0.90392296312213,0,0,0.0633107959558787,0,0,2.34798294213288,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0.279282401272254,2.06244381610515,0,0,0,0,0.134366944973453,1.08089965062721,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0.160753148465019,0.275078873194468,0,0,0,0.121499113316049,0,1.97014268247995,0.262272940674991,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.213574825135389,0.628817220398664,1.24271716604159,0.992332043623902,0,0,0,0,0.7520696820681,0,0,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.332787154610557,0.248385611765534,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621051827505038,0,0,6.26094074174081,0,0,0,0.363697318405119,0,0,2.3885753321917,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.132864840313363,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0,0,0,0.484426936895553,0,0,0,0,0,0,0,0,2.632361492224,0,0,0,0,0,0.135075169236789,0,0,0.19024743058172,0,0,4.46590060550365,0.175871244359621,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0.135939465953663,0.0657727735628491,0,0,1.49136876415977,0,0,0.913158720509496,0,0,1.28657779517981,0,0,0,0,0.207216164163037,0,0,0,0,0,6.35080575286394,0,0,0,0,0,0,0.647428837187895,0.410651227424988,0,0.485710993059139,0,0,0,0,0,0,0.463044948647668,0.655678681511872,0,4.4126697915703,0,0.392616934229891,0.297046400327086,0,0,3.19545321131502,0.322289439867886,0.0999411559249289,0,0,0,2.92134555298607,0.458729283404541,0.143339583151451,0,0.0679914901909147,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,2.57647573942014,0.535928260312357,0,0.103432995861895,0.852935927603924,0.23806443146374,0.516711278688049,0.806971285846153,0,0,0,0.653150243690884,0.342233301085281,0.740872583160463,0.645499848534087,0,0,0,0,0,7.03922827210363,2.2003459952916,2.44137706989443,0.665756774185513,0.402547587182052,0 | ||
|short_description=p14@MACF1 | |||
}} | }} |
Latest revision as of 23:43, 17 September 2015
Short description: | p14@MACF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_MACF1_5end |
Coexpression cluster: | C46_acute_Hodgkin_thymus_CD8_chronic_CD4_merkel |
Association with transcript: | 21bp_to_ENST00000528611_5end |
EntrezGene: | MACF1 |
HGNC: | 13664 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 3.62e-32 | 25 |
pro-T cell | 3.62e-32 | 25 |
mature alpha-beta T cell | 1.71e-31 | 18 |
alpha-beta T cell | 1.71e-31 | 18 |
immature T cell | 1.71e-31 | 18 |
mature T cell | 1.71e-31 | 18 |
immature alpha-beta T cell | 1.71e-31 | 18 |
CD8-positive, alpha-beta T cell | 3.95e-30 | 11 |
lymphoid lineage restricted progenitor cell | 1.53e-18 | 52 |
lymphocyte | 4.42e-18 | 53 |
common lymphoid progenitor | 4.42e-18 | 53 |
nongranular leukocyte | 4.14e-12 | 115 |
leukocyte | 8.08e-12 | 136 |
natural killer cell | 7.38e-10 | 3 |
pro-NK cell | 7.38e-10 | 3 |
single nucleate cell | 1.31e-08 | 3 |
mononuclear cell | 1.31e-08 | 3 |
hematopoietic lineage restricted progenitor cell | 1.61e-08 | 120 |
hematopoietic stem cell | 4.34e-08 | 168 |
hematopoietic cell | 2.65e-07 | 177 |
CD4-positive, alpha-beta T cell | 8.33e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
blood | 8.92e-13 | 15 |
haemolymphatic fluid | 8.92e-13 | 15 |
organism substance | 8.92e-13 | 15 |
adult organism | 1.75e-10 | 114 |
male genital duct | 1.92e-09 | 3 |
internal male genitalia | 1.92e-09 | 3 |
duct of male reproductive system | 3.72e-07 | 4 |