FFCP PHASE1:Hg19::chr3:32993128..32993144,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1233 | |EntrezGene=1233 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1605 | |HGNC=1605 | ||
|TSSclassifier=strong | |||
|UniProt=P51679,A0N0Q1 | |UniProt=P51679,A0N0Q1 | ||
|association_with_transcript=62bp_to_ENST00000330953,NM_005508,uc003cfg.1_5end | |association_with_transcript=62bp_to_ENST00000330953,NM_005508,uc003cfg.1_5end | ||
|cluster_id=chr3:32993128..32993144,+ | |||
|coexpression_cluster_id=C1361 | |coexpression_cluster_id=C1361 | ||
|description=CAGE_peak_1_at_CCR4_5end | |description=CAGE_peak_1_at_CCR4_5end | ||
|id=chr3:32993128..32993144,+ | |id=chr3:32993128..32993144,+ | ||
|ontology_enrichment_celltype=CL:0000988!1.07e-34!182;CL:0000037!1.57e-34!172;CL:0000566!1.57e-34!172;CL:0002032!1.28e-32!165;CL:0000837!1.28e-32!165;CL:0000738!2.24e-31!140;CL:0002031!1.52e-25!124;CL:0002087!7.56e-24!119;CL:0000084!4.60e-19!25;CL:0000827!4.60e-19!25;CL:0000838!1.39e-16!52;CL:0000763!1.87e-16!112;CL:0000049!1.87e-16!112;CL:0000542!5.40e-16!53;CL:0000051!5.40e-16!53;CL:0000791!2.25e-15!18;CL:0000789!2.25e-15!18;CL:0002420!2.25e-15!18;CL:0002419!2.25e-15!18;CL:0000790!2.25e-15!18;CL:0000766!2.25e-12!76;CL:0000625!3.36e-11!11;CL:0002057!3.40e-10!42;CL:0000839!5.10e-10!70;CL:0000557!4.11e-09!71;CL:0000860!7.00e-09!45;CL:0002009!1.06e-07!65;CL:0002194!1.40e-07!63;CL:0000576!1.40e-07!63;CL:0000040!1.40e-07!63;CL:0000559!1.40e-07!63;CL:0000624!3.91e-07!6;CL:0000080!5.27e-07!6 | |ontology_enrichment_celltype=CL:0000988!1.07e-34!182;CL:0000037!1.57e-34!172;CL:0000566!1.57e-34!172;CL:0002032!1.28e-32!165;CL:0000837!1.28e-32!165;CL:0000738!2.24e-31!140;CL:0002031!1.52e-25!124;CL:0002087!7.56e-24!119;CL:0000084!4.60e-19!25;CL:0000827!4.60e-19!25;CL:0000838!1.39e-16!52;CL:0000763!1.87e-16!112;CL:0000049!1.87e-16!112;CL:0000542!5.40e-16!53;CL:0000051!5.40e-16!53;CL:0000791!2.25e-15!18;CL:0000789!2.25e-15!18;CL:0002420!2.25e-15!18;CL:0002419!2.25e-15!18;CL:0000790!2.25e-15!18;CL:0000766!2.25e-12!76;CL:0000625!3.36e-11!11;CL:0002057!3.40e-10!42;CL:0000839!5.10e-10!70;CL:0000557!4.11e-09!71;CL:0000860!7.00e-09!45;CL:0002009!1.06e-07!65;CL:0002194!1.40e-07!63;CL:0000576!1.40e-07!63;CL:0000040!1.40e-07!63;CL:0000559!1.40e-07!63;CL:0000624!3.91e-07!6;CL:0000080!5.27e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000084;7.27e-27;25!CL:0000791;2.17e-21;18!CL:0000789;2.17e-21;18!CL:0002419;2.17e-21;18!CL:0000625;3.45e-15;11!CL:0002087;3.27e-10;104!CL:0000542;1.53e-09;53!CL:0000624;1.87e-09;6!CL:0000860;3.55e-09;33!CL:0002057;3.55e-09;33!CL:0000094;3.52e-07;8!CL:0000738;4.00e-07;136!CL:0000766;5.19e-07;69!CL:0000576;5.42e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.11e-33,136;CL:0000988,2.41e-33,177;CL:0000037,1.44e-32,168;CL:0002032,2.17e-31,161;CL:0000837,2.17e-31,161;CL:0000084,6.85e-27,25;CL:0000827,6.85e-27,25;CL:0002031,1.89e-25,120;CL:0002087,7.18e-25,115;CL:0000791,2.16e-21,18;CL:0000789,2.16e-21,18;CL:0002420,2.16e-21,18;CL:0002419,2.16e-21,18;CL:0000790,2.16e-21,18;CL:0000838,3.11e-16,52;CL:0000542,9.70e-16,53;CL:0000051,9.70e-16,53;CL:0000763,1.27e-15,108;CL:0000049,1.27e-15,108;CL:0000625,3.42e-15,11;CL:0000766,7.33e-14,72;CL:0000839,5.90e-10,66;CL:0000557,1.04e-09,67;CL:0000624,1.89e-09,6;CL:0000860,3.87e-09,42;CL:0002057,3.87e-09,42;CL:0002009,2.66e-08,61;CL:0002194,4.97e-08,59;CL:0000576,4.97e-08,59;CL:0000040,4.97e-08,59;CL:0000559,4.97e-08,59;CL:0000473,2.98e-07,48;CL:0000234,2.98e-07,48;CL:0000094,3.35e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000790;2.17e-21;18!CL:0000051;1.53e-09;53!CL:0002057;7.93e-08;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.32e-18!112;UBERON:0002390!1.88e-17!102;UBERON:0003061!1.88e-17!102;UBERON:0000178!8.75e-15!15;UBERON:0000179!8.75e-15!15;UBERON:0000463!8.75e-15!15;UBERON:0007023!4.66e-12!115;UBERON:0002405!2.95e-08!115;UBERON:0002371!3.26e-07!80 | |ontology_enrichment_uberon=UBERON:0002193!1.32e-18!112;UBERON:0002390!1.88e-17!102;UBERON:0003061!1.88e-17!102;UBERON:0000178!8.75e-15!15;UBERON:0000179!8.75e-15!15;UBERON:0000463!8.75e-15!15;UBERON:0007023!4.66e-12!115;UBERON:0002405!2.95e-08!115;UBERON:0002371!3.26e-07!80 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.78e-20;15!UBERON:0000179;2.78e-20;15!UBERON:0000463;2.78e-20;15!UBERON:0002390;3.09e-11;32!UBERON:0002193;4.06e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.13e-22,108;UBERON:0002390,1.61e-21,98;UBERON:0003061,1.61e-21,98;UBERON:0000178,2.88e-20,15;UBERON:0000179,2.88e-20,15;UBERON:0000463,2.88e-20,15;UBERON:0002405,6.21e-11,93;UBERON:0002371,1.33e-07,76 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,1.20538905604795,0,1.46379839637152,0,0,0,0,0,0,0.152826811495903,0,0,9.4407426443737,7.29275856384704,4.79929982279836,0,0,0,0,0,0.293600439334847,1.66198622559563,12.4337557431488,9.98250005292918,3.58264758783879,14.8991086368731,4.37878464978117,0.290796477559129,0.755751887377619,0.727752183563449,1.62700325833979,1.6446715520873,1.85823822537062,2.58923153089935,2.30544635876191,1.18241114944293,1.37898272294647,5.16387746867061,2.70852973188684,1.31769637679823,3.547779950752,0.898893937780338,2.14258724659632,8.66508373105453,3.19668562899521,0.659702600373432,1.19678194572979,0,2.03146467040009,4.53908179752912,0.622822248995575,0.75374599577023,0,1.52032191293582,3.63239701580021,5.52416453981347,2.21523671208619,0,0,0,0,0,0,0,0,0,0,0.546138611262131,1.77901850772711,0.426730222566507,0,0.574752439954483,0.661044872784862,0,1.1384259382189,1.76171156811282,1.14681968437569,0,17.3757654524276,0.790152254325231,120.386379309666,117.117207299251,220.199205428474,547.034212918299,16.6220355983131,20.8317034523283,9.74133642039557,477.393807752969,432.481472173061,521.490787849844,571.125348680418,637.510498274685,498.517479197013,154.571630327456,165.810010671509,239.667151902888,7.8591878475892,4.28065324943541,6.27213142829861,380.83270080652,123.013778446217,169.064703177454,141.944047222941,64.3502136934675,44.9247583160929,56.0766706224541,72.5772073954865,86.0070026957692,92.4487376487359,77.1893841663495,50.0888078121838,27.4185170785636,21.6626558584641,17.5237528698187,0,0,0,0,0,0,0,0,0,0,0.263504357079378,1.37528029272598,0,0,1.9472843619281,1.0447784237956,0.398873881556595,0.715471872916026,0,0.371457501329565,0,0,0,0,1.25849830862972,0.275118041940067,0.208994966536811,1.8089173141853,3.5576626268671,0.33472061276467,0,0,0,0.367663080345869,0,0,0,0,0,0,0,9.22462922052443,7.75560528296651,0,0,0,0.264818361626438,0,0.709336764396714,0,2.1349799145941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0.982827216677626,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0,0,0,1.97065295158377,9.94947304349454,1.03664057770386,0.288239906833923,1.00993946741104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80863626235752,0,0.499864955910285,0,0,0,0,0,0,0,0,0,0,17.3387068977696,44.4192804210606,33.2408463964548,0,0,0,0,0,2.99602809578873,0,7.87389475528467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.1092698254039,19.4142780736755,28.2828028179127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0.510281115829547,0.215915916102139,0,0,0,0,0,0,2.19259876645935,0.784306353074702,0,0,0,0.824328093181778,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,3.38836938193698,1.06461206063404,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,1.46228093778771,0,0,0,0,0,0.66343897524122,0,0,0,0,0.6196469961995,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.847294206991012,0,0,0,0,61.4011607170925,55.053878914251,37.5967143534947,47.8845868670156,44.0157632202228,60.3080179409227,62.6436467196213,42.0356343435963,0,0,0,0,0,3.62823401076912,24.0733671820522,0.798317485731266,1.1490322207942,0.846694330895531,0,1.12318871245384,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0.278406173895242,4.92349595790849,5.67956924799565,0,1.4098700508785,0,1.90460633053462,0,13.1503193447424,0,0,0,0,0,0,0,0,0,2.39097585901284,14.0904796920885,0,0,0.369254416383208,0,0,0,0,3.15658898038188,26.3431401581634,0,0,0.185536196323703,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.846452843541768,0.113942055847001,0,0,0,0.31900115973192,0,1.06606955203727,26.5702575308915,0.156980256395025,6.64846727600626,0.451191321234361,0.19606253431774,0.839107934879214,0,20.6617552674492,0,0,0,0,1.99052386215701,1.14994833854341,1.22206028986725,215.867381679493,341.777855126027,389.493871655349,0.202203398942031,0.802577647298789,0,0,0,0,1.18375320854817,1.20990716048664,0,0.126373159256976,1.20258735531594,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,1.64881328030313,0,0,0,0,0,0,0,4.90941887900511,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,73.6084591982081,0.558564802544508,0.458320848023367,0,0,0.429226048136571,0.446342914883745,0.739018197353989,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,3.37460837327251,0,0,0,2.44297692627514,0.367182116944987,0,0,0,0,0,0,0,0,0,0,24.2993861418043,0,0,0.439656701034247,0,0,0,0,0,9.61086713109252,4.55892484789031,6.62782488555513,30.762293352341,0,0.121792598380896,0,0,0,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443565449968902,0,0,0,0,0,0,0.150257608997218,0,0,0,0.322231671127465,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0.176689145945881,0,0.168942440653073,0,0,0,0,8.3789932800937,10.629187225069,2.9441770966052,0,0,0,226.185744711926,0,0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| ||
|short_description=p1@CCR4 | |short_description=p1@CCR4 | ||
}} | }} |
Latest revision as of 23:47, 17 September 2015
Short description: | p1@CCR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCR4_5end |
Coexpression cluster: | C1361_CD4_cord_mycosis_hairy_CD8_Whole_thymus |
Association with transcript: | 62bp_to_ENST00000330953, NM_005508, uc003cfg.1_5end |
EntrezGene: | CCR4 |
HGNC: | 1605 |
UniProt: | P51679A0N0Q1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.13e-22 | 108 |
hematopoietic system | 1.61e-21 | 98 |
blood island | 1.61e-21 | 98 |
blood | 2.88e-20 | 15 |
haemolymphatic fluid | 2.88e-20 | 15 |
organism substance | 2.88e-20 | 15 |
immune system | 6.21e-11 | 93 |
bone marrow | 1.33e-07 | 76 |