FFCP PHASE1:Hg19::chr13:76210721..76210732,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4008 | |EntrezGene=4008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6646 | |HGNC=6646 | ||
|TSSclassifier=strong | |||
|UniProt=E9PMP7 | |UniProt=E9PMP7 | ||
|association_with_transcript=262bp_to_ENST00000377499,uc001vjt.1_5end | |association_with_transcript=262bp_to_ENST00000377499,uc001vjt.1_5end | ||
|cluster_id=chr13:76210721..76210732,+ | |||
|coexpression_cluster_id=C1189 | |coexpression_cluster_id=C1189 | ||
|description=CAGE_peak_38_at_LMO7_5end | |description=CAGE_peak_38_at_LMO7_5end | ||
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|ontology_enrichment_celltype=CL:0000055!4.22e-23!180;CL:0000057!2.46e-19!75;CL:0002620!2.06e-10!23;CL:0000048!1.83e-08!430;CL:0000723!2.76e-08!436;CL:0000219!4.87e-08!390;CL:0000034!1.30e-07!444;CL:0002556!3.11e-07!6;CL:0002320!6.08e-07!365;CL:0002371!8.68e-07!591 | |ontology_enrichment_celltype=CL:0000055!4.22e-23!180;CL:0000057!2.46e-19!75;CL:0002620!2.06e-10!23;CL:0000048!1.83e-08!430;CL:0000723!2.76e-08!436;CL:0000219!4.87e-08!390;CL:0000034!1.30e-07!444;CL:0002556!3.11e-07!6;CL:0002320!6.08e-07!365;CL:0002371!8.68e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000138;4.40e-14;6!CL:0002580;2.54e-13;3!CL:0000222;8.93e-11;1!CL:0002568;2.38e-10;1!CL:1000306;5.96e-10;4!CL:0002547;5.96e-10;4!CL:0000153;1.43e-09;9!CL:0000447;1.43e-09;9!CL:0002334;1.57e-07;12 | |ontology_enrichment_celltype_v019=CL:0000138;4.40e-14;6!CL:0002580;2.54e-13;3!CL:0000222;8.93e-11;1!CL:0002568;2.38e-10;1!CL:1000306;5.96e-10;4!CL:0002547;5.96e-10;4!CL:0000153;1.43e-09;9!CL:0000447;1.43e-09;9!CL:0002334;1.57e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000058,6.17e-14,6;CL:0000138,6.17e-14,6;CL:0002580,2.18e-13,3;CL:0000057,1.55e-10,76;CL:0002568,2.50e-10,1;CL:1000306,7.83e-10,4;CL:0002547,7.83e-10,4;CL:0000153,1.78e-09,9;CL:0000447,1.78e-09,9;CL:0002334,1.52e-07,12 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001758!3.11e-07!6;UBERON:0003672!3.11e-07!6;UBERON:0002384!7.78e-07!375 | |ontology_enrichment_uberon=UBERON:0001758!3.11e-07!6;UBERON:0003672!3.11e-07!6;UBERON:0002384!7.78e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;5.96e-10;4!UBERON:0000415;5.96e-10;4!UBERON:0007240;5.96e-10;4!UBERON:0005742;5.96e-10;4!UBERON:0005734;5.96e-10;4!UBERON:0004664;5.96e-10;4!UBERON:0004663;5.96e-10;4!UBERON:0000310;8.04e-09;10!UBERON:0001443;4.61e-08;11!UBERON:0003688;3.44e-07;6!UBERON:0002358;3.44e-07;6!UBERON:0003684;3.44e-07;6!UBERON:0001178;3.44e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0004797;5.96e-10;4!UBERON:0000415;5.96e-10;4!UBERON:0007240;5.96e-10;4!UBERON:0005742;5.96e-10;4!UBERON:0005734;5.96e-10;4!UBERON:0004664;5.96e-10;4!UBERON:0004663;5.96e-10;4!UBERON:0000310;8.04e-09;10!UBERON:0001443;4.61e-08;11!UBERON:0003688;3.44e-07;6!UBERON:0002358;3.44e-07;6!UBERON:0003684;3.44e-07;6!UBERON:0001178;3.44e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,7.83e-10,4;UBERON:0007240,7.83e-10,4;UBERON:0005742,7.83e-10,4;UBERON:0005734,7.83e-10,4;UBERON:0004664,7.83e-10,4;UBERON:0004663,7.83e-10,4;UBERON:0000310,7.84e-09,10;UBERON:0001443,4.51e-08,11;UBERON:0003688,3.77e-07,6;UBERON:0002358,3.77e-07,6;UBERON:0003684,3.77e-07,6;UBERON:0001178,3.77e-07,6 | |||
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| ||
|short_description=p38@LMO7 | |short_description=p38@LMO7 | ||
}} | }} |
Latest revision as of 00:00, 18 September 2015
Short description: | p38@LMO7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_38_at_LMO7_5end |
Coexpression cluster: | C1189_Preadipocyte_Fibroblast_Ewing_mesodermal_Adipocyte_Smooth_osteoclastoma |
Association with transcript: | 262bp_to_ENST00000377499, uc001vjt.1_5end |
EntrezGene: | LMO7 |
HGNC: | 6646 |
UniProt: | E9PMP7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 6.17e-14 | 6 |
chondrocyte | 6.17e-14 | 6 |
preadipocyte of the breast | 2.18e-13 | 3 |
fibroblast | 1.55e-10 | 76 |
mesenchymal stem cell of Wharton's jelly | 2.50e-10 | 1 |
fibroblast of tunica adventitia of artery | 7.83e-10 | 4 |
fibroblast of the aortic adventitia | 7.83e-10 | 4 |
GAG secreting cell | 1.78e-09 | 9 |
carbohydrate secreting cell | 1.78e-09 | 9 |
preadipocyte | 1.52e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
artery wall | 7.83e-10 | 4 |
tunica adventitia of artery | 7.83e-10 | 4 |
adventitia | 7.83e-10 | 4 |
tunica adventitia of blood vessel | 7.83e-10 | 4 |
aorta tunica adventitia | 7.83e-10 | 4 |
aorta wall | 7.83e-10 | 4 |
breast | 7.84e-09 | 10 |
chest | 4.51e-08 | 11 |
omentum | 3.77e-07 | 6 |
peritoneum | 3.77e-07 | 6 |
abdominal cavity | 3.77e-07 | 6 |
visceral peritoneum | 3.77e-07 | 6 |