FFCP PHASE1:Hg19::chr17:77023696..77023719,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=A8MTB1 | |UniProt=A8MTB1 | ||
|association_with_transcript=-13bp_to_ENST00000397571,uc002jwo.2_5end | |association_with_transcript=-13bp_to_ENST00000397571,uc002jwo.2_5end | ||
|cluster_id=chr17:77023696..77023719,- | |||
|description=CAGE_peak_1_at_ENST00000397571_5end,CAGE_peak_1_at_uc002jwo.2_5end | |description=CAGE_peak_1_at_ENST00000397571_5end,CAGE_peak_1_at_uc002jwo.2_5end | ||
|id=chr17:77023696..77023719,- | |id=chr17:77023696..77023719,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.28e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.33e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.20e-12;11!UBERON:0009497;1.95e-10;13!UBERON:0003104;1.33e-09;31!UBERON:0004872;6.39e-08;7!UBERON:0004140;4.08e-07;1!UBERON:0003124;4.32e-07;1!UBERON:0010227;6.06e-07;1 | |||
|ontology_enrichment_disease=DOID:2394!9.16e-09!14 | |ontology_enrichment_disease=DOID:2394!9.16e-09!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.12e-11!9;UBERON:0007100!4.02e-11!27;UBERON:0001048!1.88e-10!168;UBERON:0000948!2.11e-08!24;UBERON:0005498!2.11e-08!24;UBERON:0004140!2.11e-08!24;UBERON:0009881!2.11e-08!24;UBERON:0004141!2.11e-08!24;UBERON:0003084!2.11e-08!24;UBERON:0007005!2.11e-08!24;UBERON:0004139!2.11e-08!24;UBERON:0004291!2.11e-08!24;UBERON:0004458!3.98e-08!49;UBERON:0000992!1.95e-07!13;UBERON:0002323!2.43e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.46e-14;9!UBERON:0001557;2.46e-14;9!UBERON:0007100;1.15e-12;25!UBERON:0000948;2.45e-08;22!UBERON:0003978;6.69e-08;3!UBERON:0000946;6.69e-08;3!UBERON:0002107;4.78e-07;19!UBERON:0006925;4.78e-07;19!UBERON:0002079;6.06e-07;1!UBERON:0001282;6.06e-07;1!UBERON:0009842;6.06e-07;1!UBERON:0003704;6.06e-07;1!UBERON:0001171;6.06e-07;1!UBERON:0001172;6.06e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.90e-14,9;UBERON:0007100,1.04e-11,27;UBERON:0003978,3.19e-08,3;UBERON:0009751,3.19e-08,3;UBERON:0000946,3.19e-08,3;UBERON:0002523,3.19e-08,3;UBERON:0005983,3.19e-08,3;UBERON:0002165,3.19e-08,3;UBERON:0002062,3.19e-08,3;UBERON:0007280,3.19e-08,3;UBERON:0000948,1.23e-07,24;UBERON:0005498,1.23e-07,24;UBERON:0004140,1.23e-07,24;UBERON:0009881,1.23e-07,24;UBERON:0004141,1.23e-07,24;UBERON:0003084,1.23e-07,24;UBERON:0007005,1.23e-07,24;UBERON:0004139,1.23e-07,24;UBERON:0004291,1.23e-07,24;UBERON:0004797,2.47e-07,7;UBERON:0002107,5.60e-07,19;UBERON:0006925,5.60e-07,19;UBERON:0008836,5.60e-07,19;UBERON:0001048,6.64e-07,160;UBERON:0002079,6.80e-07,1;UBERON:0001282,7.19e-07,1;UBERON:0009842,7.19e-07,1;UBERON:0003704,7.19e-07,1;UBERON:0001171,7.19e-07,1;UBERON:0001172,7.19e-07,1;UBERON:0002135,7.60e-07,1 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0.281908808191942,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.511450247374121,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0.976248230192678,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,1.05927344650575,0,0,0,1.06748995729705,0,0.622422070799533,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,1.09098448236334,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.709840800239063,0.674338760312407,1.20505514941741,1.10293972732394,0.871517776369625,0.71181185733329,1.34831308160164,1.17732879075208,1.15424147083917,0,0,0,0,0,0,0.590789906681404,0,0.368965315629341,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0,0.380508304469197,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.258543431515556,0,0,0.531876233169741,0,0,0,0,0.57191197463259,0,0,0,0.710783897485092,0,0.602878754119172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0,0.256278298511402,0,0,1.48418066444991,0.154209693802656,0,0.0821271560138091,0,0.232420756919918,0.120859449591622,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0.165018999841176,1.14853107599234,0,0,0,0,0.15350367472613,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0.38126038784765,0,0,0,0.78494864019923,0,0,0.353437207037059,0,0,0.421258456238981,0,0,0,0.136499911407986,0.424216295861138,0,0,0,0.876901770507525,0,0,0.202910376962704,0,0,0.143411352204052,0,0,0,0,0.658589785919804,0,0,0,0,0,1.7887322147588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67043704337145,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0.10893846351899,0,0.0769502585037971,2.05095700524602,0,0,0.108647371922008,0.31900115973192,0.366390373607449,0.533034776018635,0,0.156980256395025,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.586993856796269,0,0,0,0,0.063186579628488,0.150323419414493,0.103688191397247,3.32326936353593,0,1.88359751044335,1.19472429772959,0,0,0,0,0,0,0,0.580537987734511,1.0232504392066,0.985385484638511,0.0969890164884194,0,0,0,0,0,0,0.0801588202515337,0,1.39866726707491,0,0,0,0.14405479798815,0,0,1.35904206073614,0.836822770498666,0,0,0,0.136905378891993,0,0,0,1.95497680890578,1.60412296808179,0.717873024576814,0.599037001496973,2.57535628881943,1.33902874465124,6.31524641375227,1.08089965062721,0,2.36349546921671,2.47247575143499,2.2243169471881,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,2.1440859791201,0,0,0,0,0,0,0,0,0.453248366080503,0.439656701034247,0,0,0,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0,1.08803560673895,1.2534494701135,0,0.655745261419609,0,0,0,0,0,0,0,0,0,1.66814029295813,0,0.470531639396343,0,0.144921028610825,0.149254802886874,0,0,0,0.251567901752575,0,0.457680136793847,0.453692771289717,0,0.147855149989634,0.63718706865481,0.449803112163605,0.465788870628778,0.829412415681711,0,0,0.300515217994437,1.52322084867518,0.406870733204662,0.909243296012797,0.214821114084977,0.464033759878494,0.796191777397232,0.400027764663154,0,0.336749488765919,0,0,0.428883182749851,0,0.453411851024545,0.926089897295336,0.244736704506468,0,0.308801447160972,0.657852148736121,0,0,0,0,0.345430341731199,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0.127894371303652,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0.3062454773532,0.128458450192919,0,0,0.205116364240755,0,0,0,0,0,0,0,0.115525666150338,0,0,0.397832444232549,0.0752103283492573,0,0,0,0.163771917510097,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,5.41084457992097,0,0,0.135939465953663,0,0,0,0,0,1.40136081656895,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0.231522474323834,0,0.940634592723046,0,0,0,0,0,0,4.0413084731337,0.580120991762195,0,0,0,0,0,0.458729283404541,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0.23806443146374,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0.856402095563933,0.281908808191942,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.511450247374121,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0.976248230192678,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,1.05927344650575,0,0,0,1.06748995729705,0,0.622422070799533,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,1.09098448236334,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.709840800239063,0.674338760312407,1.20505514941741,1.10293972732394,0.871517776369625,0.71181185733329,1.34831308160164,1.17732879075208,1.15424147083917,0,0,0,0,0,0,0.590789906681404,0,0.368965315629341,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0,0.380508304469197,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.258543431515556,0,0,0.531876233169741,0,0,0,0,0.57191197463259,0,0,0,0.710783897485092,0,0.602878754119172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0,0.256278298511402,0,0,1.48418066444991,0.154209693802656,0,0.0821271560138091,0,0.232420756919918,0.120859449591622,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0.165018999841176,1.14853107599234,0,0,0,0,0.15350367472613,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0.38126038784765,0,0,0,0.78494864019923,0,0,0.353437207037059,0,0,0.421258456238981,0,0,0,0.136499911407986,0.424216295861138,0,0,0,0.876901770507525,0,0,0.202910376962704,0,0,0.143411352204052,0,0,0,0,0.658589785919804,0,0,0,0,0,1.7887322147588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67043704337145,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0.10893846351899,0,0.0769502585037971,2.05095700524602,0,0,0.108647371922008,0.31900115973192,0.366390373607449,0.533034776018635,0,0.156980256395025,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.586993856796269,0,0,0,0,0.063186579628488,0.150323419414493,0.103688191397247,3.32326936353593,0,1.88359751044335,1.19472429772959,0,0,0,0,0,0,0,0.580537987734511,1.0232504392066,0.985385484638511,0.0969890164884194,0,0,0,0,0,0,0.0801588202515337,0,1.39866726707491,0,0,0,0.14405479798815,0,0,1.35904206073614,0.836822770498666,0,0,0,0.136905378891993,0,0,0,1.95497680890578,1.60412296808179,0.717873024576814,0.599037001496973,2.57535628881943,1.33902874465124,6.31524641375227,1.08089965062721,0,2.36349546921671,2.47247575143499,2.2243169471881,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,2.1440859791201,0,0,0,0,0,0,0,0,0.453248366080503,0.439656701034247,0,0,0,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0,1.08803560673895,1.2534494701135,0,0.655745261419609,0,0,0,0,0,0,0,0,0,1.66814029295813,0,0.470531639396343,0,0.144921028610825,0.149254802886874,0,0,0,0.251567901752575,0,0.457680136793847,0.453692771289717,0,0.147855149989634,0.63718706865481,0.449803112163605,0.465788870628778,0.829412415681711,0,0,0.300515217994437,1.52322084867518,0.406870733204662,0.909243296012797,0.214821114084977,0.464033759878494,0.796191777397232,0.400027764663154,0,0.336749488765919,0,0,0.428883182749851,0,0.453411851024545,0.926089897295336,0.244736704506468,0,0.308801447160972,0.657852148736121,0,0,0,0,0.345430341731199,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0.127894371303652,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0.3062454773532,0.128458450192919,0,0,0.205116364240755,0,0,0,0,0,0,0,0.115525666150338,0,0,0.397832444232549,0.0752103283492573,0,0,0,0.163771917510097,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,5.41084457992097,0,0,0.135939465953663,0,0,0,0,0,1.40136081656895,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0.231522474323834,0,0.940634592723046,0,0,0,0,0,0,4.0413084731337,0.580120991762195,0,0,0,0,0,0.458729283404541,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0.23806443146374,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p1@ENST00000397571,p1@uc002jwo.2 | |short_description=p1@ENST00000397571,p1@uc002jwo.2 | ||
}} | }} |
Latest revision as of 00:01, 18 September 2015
Short description: | p1@ENST00000397571, p1@uc002jwo.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000397571_5end, CAGE_peak_1_at_uc002jwo.2_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_ENST00000397571, uc002jwo.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.33e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.90e-14 | 9 |
primary circulatory organ | 1.04e-11 | 27 |
valve | 3.19e-08 | 3 |
cardiac mesenchyme | 3.19e-08 | 3 |
cardial valve | 3.19e-08 | 3 |
tunica intima | 3.19e-08 | 3 |
heart layer | 3.19e-08 | 3 |
endocardium | 3.19e-08 | 3 |
endocardial cushion | 3.19e-08 | 3 |
presumptive endocardium | 3.19e-08 | 3 |
heart | 1.23e-07 | 24 |
primitive heart tube | 1.23e-07 | 24 |
primary heart field | 1.23e-07 | 24 |
anterior lateral plate mesoderm | 1.23e-07 | 24 |
heart tube | 1.23e-07 | 24 |
heart primordium | 1.23e-07 | 24 |
cardiac mesoderm | 1.23e-07 | 24 |
cardiogenic plate | 1.23e-07 | 24 |
heart rudiment | 1.23e-07 | 24 |
blood vessel layer | 2.47e-07 | 7 |
liver | 5.60e-07 | 19 |
digestive gland | 5.60e-07 | 19 |
liver bud | 5.60e-07 | 19 |
primordium | 6.64e-07 | 160 |
left cardiac atrium | 6.80e-07 | 1 |
intralobular bile duct | 7.19e-07 | 1 |
acinus | 7.19e-07 | 1 |
intrahepatic bile duct | 7.19e-07 | 1 |
portal lobule | 7.19e-07 | 1 |
hepatic acinus | 7.19e-07 | 1 |
mitral valve | 7.60e-07 | 1 |