FFCP PHASE1:Hg19::chr2:65159543..65159557,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=400958 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=23bp_to_NR_036586_5end | |||
|cluster_id=chr2:65159543..65159557,- | |||
|coexpression_cluster_id=C782 | |||
|description=CAGE_peak_2_at_LOC400958_5end | |||
|id=chr2:65159543..65159557,- | |||
|ontology_enrichment_celltype=CL:0000945!3.07e-57!24;CL:0000826!3.07e-57!24;CL:0000542!6.42e-27!53;CL:0000051!6.42e-27!53;CL:0000838!2.67e-24!52;CL:0002087!2.07e-22!119;CL:0002031!2.27e-19!124;CL:0000738!3.36e-18!140;CL:0000236!6.34e-17!14;CL:0002032!1.40e-14!165;CL:0000837!1.40e-14!165;CL:0000037!9.34e-14!172;CL:0000566!9.34e-14!172;CL:0000988!1.09e-12!182;CL:0000235!3.13e-12!10;CL:0000785!3.70e-11!2;CL:0000955!3.70e-11!2;CL:0000818!3.70e-11!2;CL:0000954!3.70e-11!2;CL:0000816!3.70e-11!2;CL:0000840!1.01e-07!5;CL:0001029!1.01e-07!5;CL:0000817!1.03e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.88e-47;24!CL:0000946;1.54e-15;1!CL:0000786;1.54e-15;1!CL:0000542;4.34e-14;53!CL:0000235;2.77e-10;6!CL:0000047;2.57e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.62e-47,24;CL:0000826,4.62e-47,24;CL:0000542,7.45e-26,53;CL:0000051,7.45e-26,53;CL:0000838,2.44e-21,52;CL:0002087,2.11e-16,115;CL:0000946,1.54e-15,1;CL:0000786,1.54e-15,1;CL:0000980,1.54e-15,1;CL:0000738,1.07e-13,136;CL:0002031,4.65e-13,120;CL:0002032,2.19e-11,161;CL:0000837,2.19e-11,161;CL:0000037,7.36e-11,168;CL:0000988,3.04e-10,177;CL:0000235,3.04e-10,6;CL:0000236,1.07e-09,14;CL:0000785,2.00e-08,2;CL:0000955,2.00e-08,2;CL:0000818,2.00e-08,2;CL:0000954,2.00e-08,2;CL:0000816,2.00e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000051;4.34e-14;53!CL:0000954;2.00e-08;2 | |||
|ontology_enrichment_disease=DOID:0060058!6.79e-18!10 | |||
|ontology_enrichment_disease_v019=DOID:12603;1.24e-15;1!DOID:0060058;1.19e-13;10 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,1.34e-15,1;DOID:0060058,1.19e-13,10 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.16e-15!3;UBERON:0004854!1.16e-15!3;UBERON:0009034!1.16e-15!3;UBERON:0002095!1.16e-15!3;UBERON:0004782!1.16e-15!3;UBERON:0003281!1.16e-15!3;UBERON:0009664!1.16e-15!3;UBERON:0002296!1.16e-15!3;UBERON:0005602!1.16e-15!3;UBERON:0001179!1.16e-15!3;UBERON:0006293!1.16e-15!3;UBERON:0004177!2.18e-11!7;UBERON:0002193!1.84e-07!112;UBERON:0002390!2.38e-07!102;UBERON:0003061!2.38e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.88383224259225,5.66494067204626,6.84783797429009,0,0,0,0,0,0,0.619737604642413,7.2506308568585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63841583378639,0,0.853460445133014,0.800791974072025,1.72425731986345,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.174129737299267,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63802985597466,0.891786973732369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0,0,0,0,3.15865397713722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,1.35393286007176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338693328263138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790446527591777,3.53198535304598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18944576355981,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.375935671919414,0.515663103788617,6.29629282327052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0,0,0,0,0,0,0.26940821205835,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p2@LOC400958 | |||
}} |
Latest revision as of 00:11, 18 September 2015
Short description: | p2@LOC400958 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC400958_5end |
Coexpression cluster: | C782_B_Burkitt_lymphoma_splenic_acute_CD19_xeroderma |
Association with transcript: | 23bp_to_NR_036586_5end |
EntrezGene: | LOC400958 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.62e-47 | 24 |
pro-B cell | 4.62e-47 | 24 |
lymphocyte | 7.45e-26 | 53 |
common lymphoid progenitor | 7.45e-26 | 53 |
lymphoid lineage restricted progenitor cell | 2.44e-21 | 52 |
nongranular leukocyte | 2.11e-16 | 115 |
antibody secreting cell | 1.54e-15 | 1 |
plasma cell | 1.54e-15 | 1 |
plasmablast | 1.54e-15 | 1 |
leukocyte | 1.07e-13 | 136 |
hematopoietic lineage restricted progenitor cell | 4.65e-13 | 120 |
hematopoietic oligopotent progenitor cell | 2.19e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.19e-11 | 161 |
hematopoietic stem cell | 7.36e-11 | 168 |
hematopoietic cell | 3.04e-10 | 177 |
macrophage | 3.04e-10 | 6 |
B cell | 1.07e-09 | 14 |
mature B cell | 2.00e-08 | 2 |
pre-B-II cell | 2.00e-08 | 2 |
transitional stage B cell | 2.00e-08 | 2 |
small pre-B-II cell | 2.00e-08 | 2 |
immature B cell | 2.00e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 1.34e-15 | 1 |
lymphoma | 1.19e-13 | 10 |