FFCP PHASE1:Hg19::chr2:167350586..167350598,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6332 | |EntrezGene=6332 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10594 | |HGNC=10594 | ||
|TSSclassifier=strong | |||
|UniProt=C9JII9 | |UniProt=C9JII9 | ||
|association_with_transcript=116bp_to_ENST00000441411_5end | |association_with_transcript=116bp_to_ENST00000441411_5end | ||
|cluster_id=chr2:167350586..167350598,- | |||
|coexpression_cluster_id=C131 | |||
|description=CAGE_peak_6_at_SCN7A_5end | |description=CAGE_peak_6_at_SCN7A_5end | ||
|id=chr2:167350586..167350598,- | |id=chr2:167350586..167350598,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010226;5.85e-14;1!UBERON:0004140;5.85e-14;1!UBERON:0005062;1.07e-13;4!UBERON:0007284;1.07e-13;4!UBERON:0010227;1.33e-13;1!UBERON:0008947;3.01e-07;29 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.98e-59!115;UBERON:0003075!5.64e-12!86;UBERON:0007284!5.64e-12!86;UBERON:0001049!2.33e-11!57;UBERON:0005068!2.33e-11!57;UBERON:0006241!2.33e-11!57;UBERON:0007135!2.33e-11!57;UBERON:0002346!3.66e-11!90;UBERON:0003978!2.62e-09!3;UBERON:0009751!2.62e-09!3;UBERON:0000946!2.62e-09!3;UBERON:0002523!2.62e-09!3;UBERON:0005983!2.62e-09!3;UBERON:0002165!2.62e-09!3;UBERON:0002062!2.62e-09!3;UBERON:0007280!2.62e-09!3;UBERON:0004151!3.81e-09!3;UBERON:0000481!7.54e-09!347;UBERON:0003103!7.55e-09!69;UBERON:0005743!2.16e-08!86;UBERON:0006947!3.59e-08!3;UBERON:0004054!3.59e-08!3;UBERON:0001017!4.06e-08!82;UBERON:0002240!4.84e-08!3;UBERON:0000988!1.01e-07!3;UBERON:0004111!1.60e-07!241;UBERON:0000062!2.24e-07!511;UBERON:0002616!2.41e-07!59;UBERON:0000073!3.93e-07!94;UBERON:0001016!3.93e-07!94;UBERON:0003076!5.47e-07!15;UBERON:0003057!5.47e-07!15;UBERON:0000477!9.41e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;6.24e-18;3!UBERON:0000946;6.24e-18;3!UBERON:0007100;1.08e-17;25!UBERON:0004151;1.58e-17;3!UBERON:0000948;2.99e-14;22!UBERON:0002135;3.28e-14;1!UBERON:0002084;5.85e-14;1!UBERON:0002146;5.85e-14;1!UBERON:0002171;5.85e-14;1!UBERON:0002082;5.85e-14;1!UBERON:0005623;5.85e-14;1!UBERON:0006518;5.85e-14;1!UBERON:0008949;5.85e-14;1!UBERON:0000101;5.85e-14;1!UBERON:0002167;5.85e-14;1!UBERON:0002079;1.33e-13;1!UBERON:0006834;1.33e-13;1!UBERON:0002133;9.55e-08;2!UBERON:0003127;1.27e-07;2!UBERON:0001905;1.93e-07;2!UBERON:0002757;1.93e-07;2!UBERON:0010134;1.93e-07;2!UBERON:0002081;1.93e-07;2!UBERON:0005408;1.93e-07;2!UBERON:0001899;1.93e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,5.05e-18,3;UBERON:0009751,5.05e-18,3;UBERON:0000946,5.05e-18,3;UBERON:0002523,5.05e-18,3;UBERON:0005983,5.05e-18,3;UBERON:0002165,5.05e-18,3;UBERON:0002062,5.05e-18,3;UBERON:0007280,5.05e-18,3;UBERON:0004151,1.64e-17,3;UBERON:0007100,2.34e-16,27;UBERON:0002135,3.08e-14,1;UBERON:0002146,4.53e-14,1;UBERON:0005623,4.53e-14,1;UBERON:0002084,5.85e-14,1;UBERON:0002082,5.85e-14,1;UBERON:0010226,5.85e-14,1;UBERON:0002171,7.55e-14,1;UBERON:0006518,7.55e-14,1;UBERON:0008949,7.55e-14,1;UBERON:0000101,7.55e-14,1;UBERON:0002167,7.55e-14,1;UBERON:0006834,1.10e-13,1;UBERON:0002079,1.42e-13,1;UBERON:0000948,4.29e-13,24;UBERON:0005498,4.29e-13,24;UBERON:0004140,4.29e-13,24;UBERON:0009881,4.29e-13,24;UBERON:0004141,4.29e-13,24;UBERON:0003084,4.29e-13,24;UBERON:0007005,4.29e-13,24;UBERON:0004139,4.29e-13,24;UBERON:0004291,4.29e-13,24;UBERON:0007023,9.90e-10,114;UBERON:0005157,2.22e-09,47;UBERON:0003103,1.96e-08,68;UBERON:0004797,2.99e-08,7;UBERON:0002133,9.25e-08,2;UBERON:0003127,1.36e-07,2;UBERON:0001905,1.64e-07,2;UBERON:0002757,1.64e-07,2;UBERON:0010134,1.64e-07,2;UBERON:0005408,1.64e-07,2;UBERON:0001899,1.64e-07,2;UBERON:0002081,1.99e-07,2;UBERON:0010227,1.99e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0.828851746593443,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0.219385397153973,0,0,0.923403102045565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.353830258013357,0.611030144933625,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0,0.394584402849391,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.387956065953678,0,0,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,5.30636562417283,2.97908551215189,0.717873024576814,0.399358000997982,0.429226048136571,1.11585728720936,2.75452237195578,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,1.42939065274673,2.64836788146173,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0.66116300871345,0,0,4.59185874041087,5.03053776318931,2.07119527673598,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0.548257766857182,0.992422356778588,0,0,1.60710550763486,0,0,0.227662191351298,0.0887023701626388,0,0,0.0679697329768317,0.0657727735628491,0,0,1.88383422841234,0,0,0.913158720509496,0,0,0.142953088353313,0,0,0.521574816907738,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0.463044948647668,0.218559560503957,0,0.490296643507811,0,0.392616934229891,0.297046400327086,0.4226557275834,0,0.0939839179798536,0.128915775947154,0,0,0,0,0.730336388246517,0,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0.426467963801962,0.952257725854961,0.0645889098360061,0.31037357147929,0,0,0,0,0.342233301085281,0,0.215166616178029,2.32862249582209,0,0,0,0,0,1.58913877437726,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0.828851746593443,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0.219385397153973,0,0,0.923403102045565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.353830258013357,0.611030144933625,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0,0.394584402849391,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.387956065953678,0,0,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,5.30636562417283,2.97908551215189,0.717873024576814,0.399358000997982,0.429226048136571,1.11585728720936,2.75452237195578,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,1.42939065274673,2.64836788146173,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0.66116300871345,0,0,4.59185874041087,5.03053776318931,2.07119527673598,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0.548257766857182,0.992422356778588,0,0,1.60710550763486,0,0,0.227662191351298,0.0887023701626388,0,0,0.0679697329768317,0.0657727735628491,0,0,1.88383422841234,0,0,0.913158720509496,0,0,0.142953088353313,0,0,0.521574816907738,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0.463044948647668,0.218559560503957,0,0.490296643507811,0,0.392616934229891,0.297046400327086,0.4226557275834,0,0.0939839179798536,0.128915775947154,0,0,0,0,0.730336388246517,0,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0.426467963801962,0.952257725854961,0.0645889098360061,0.31037357147929,0,0,0,0,0.342233301085281,0,0.215166616178029,2.32862249582209,0,0,0,0,0,1.58913877437726,0,0,0.201273793591026,0 | ||
|short_description=p6@SCN7A | |short_description=p6@SCN7A | ||
}} | }} |
Latest revision as of 00:14, 18 September 2015
Short description: | p6@SCN7A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SCN7A_5end |
Coexpression cluster: | C131_lung_trachea_Alveolar_thyroid_umbilical_throat_skin |
Association with transcript: | 116bp_to_ENST00000441411_5end |
EntrezGene: | SCN7A |
HGNC: | 10594 |
UniProt: | C9JII9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data