FFCP PHASE1:Hg19::chr2:167350627..167350640,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6332 | |EntrezGene=6332 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10594 | |HGNC=10594 | ||
|TSSclassifier=strong | |||
|UniProt=C9JII9 | |UniProt=C9JII9 | ||
|association_with_transcript=74bp_to_ENST00000441411_5end | |association_with_transcript=74bp_to_ENST00000441411_5end | ||
|cluster_id=chr2:167350627..167350640,- | |||
|coexpression_cluster_id=C131 | |coexpression_cluster_id=C131 | ||
|description=CAGE_peak_4_at_SCN7A_5end | |description=CAGE_peak_4_at_SCN7A_5end | ||
|id=chr2:167350627..167350640,- | |id=chr2:167350627..167350640,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.98e-11;4!UBERON:0007284;1.98e-11;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0003978;4.42e-15;3!UBERON:0000946;4.42e-15;3!UBERON:0004151;2.97e-14;3!UBERON:0002133;1.87e-10;2!UBERON:0000341;3.43e-10;2!UBERON:0002081;3.43e-10;2!UBERON:0001829;7.66e-10;2!UBERON:0007100;2.52e-08;25!UBERON:0007023;1.01e-07;114!UBERON:0000948;3.24e-07;22!UBERON:0000922;4.43e-07;49!UBERON:0001723;5.19e-07;3!UBERON:0001033;5.19e-07;3!UBERON:0006947;7.80e-07;3!UBERON:0004054;7.80e-07;3 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003978;4.42e-15;3!UBERON:0000946;4.42e-15;3!UBERON:0004151;2.97e-14;3!UBERON:0002133;1.87e-10;2!UBERON:0000341;3.43e-10;2!UBERON:0002081;3.43e-10;2!UBERON:0001829;7.66e-10;2!UBERON:0007100;2.52e-08;25!UBERON:0007023;1.01e-07;114!UBERON:0000948;3.24e-07;22!UBERON:0000922;4.43e-07;49!UBERON:0001723;5.19e-07;3!UBERON:0001033;5.19e-07;3!UBERON:0006947;7.80e-07;3!UBERON:0004054;7.80e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.36e-25,114;UBERON:0003978,3.76e-15,3;UBERON:0009751,3.76e-15,3;UBERON:0000946,3.76e-15,3;UBERON:0002523,3.76e-15,3;UBERON:0005983,3.76e-15,3;UBERON:0002165,3.76e-15,3;UBERON:0002062,3.76e-15,3;UBERON:0007280,3.76e-15,3;UBERON:0004151,2.32e-14,3;UBERON:0002133,1.59e-10,2;UBERON:0002081,2.79e-10,2;UBERON:0010227,2.79e-10,2;UBERON:0000341,5.84e-10,2;UBERON:0001829,9.20e-10,2;UBERON:0003103,1.07e-08,68;UBERON:0007100,1.05e-07,27;UBERON:0001723,4.97e-07,3;UBERON:0001033,4.97e-07,3;UBERON:0010056,4.97e-07,3;UBERON:0006947,6.72e-07,3;UBERON:0004054,6.72e-07,3;UBERON:0004797,9.89e-07,7 | |||
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| ||
|short_description=p4@SCN7A | |short_description=p4@SCN7A | ||
}} | }} |
Latest revision as of 00:15, 18 September 2015
Short description: | p4@SCN7A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SCN7A_5end |
Coexpression cluster: | C131_lung_trachea_Alveolar_thyroid_umbilical_throat_skin |
Association with transcript: | 74bp_to_ENST00000441411_5end |
EntrezGene: | SCN7A |
HGNC: | 10594 |
UniProt: | C9JII9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 6.36e-25 | 114 |
valve | 3.76e-15 | 3 |
cardiac mesenchyme | 3.76e-15 | 3 |
cardial valve | 3.76e-15 | 3 |
tunica intima | 3.76e-15 | 3 |
heart layer | 3.76e-15 | 3 |
endocardium | 3.76e-15 | 3 |
endocardial cushion | 3.76e-15 | 3 |
presumptive endocardium | 3.76e-15 | 3 |
cardiac chamber | 2.32e-14 | 3 |
atrioventricular valve | 1.59e-10 | 2 |
cardiac atrium | 2.79e-10 | 2 |
future cardiac atrium | 2.79e-10 | 2 |
throat | 5.84e-10 | 2 |
major salivary gland | 9.20e-10 | 2 |
compound organ | 1.07e-08 | 68 |
primary circulatory organ | 1.05e-07 | 27 |
tongue | 4.97e-07 | 3 |
gustatory system | 4.97e-07 | 3 |
future tongue | 4.97e-07 | 3 |
male genital duct | 6.72e-07 | 3 |
internal male genitalia | 6.72e-07 | 3 |
blood vessel layer | 9.89e-07 | 7 |