FFCP PHASE1:Hg19::chr13:76363129..76363141,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4008 | |EntrezGene=4008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6646 | |HGNC=6646 | ||
|TSSclassifier=strong | |||
|UniProt=E9PLU6 | |UniProt=E9PLU6 | ||
|association_with_transcript=155bp_to_ENST00000497947_5end | |association_with_transcript=155bp_to_ENST00000497947_5end | ||
|cluster_id=chr13:76363129..76363141,+ | |||
|coexpression_cluster_id=C1190 | |coexpression_cluster_id=C1190 | ||
|description=CAGE_peak_31_at_LMO7_5end | |description=CAGE_peak_31_at_LMO7_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000188!2.31e-15!9;CL:0000515!3.24e-08!4 | |ontology_enrichment_celltype=CL:0000188!2.31e-15!9;CL:0000515!3.24e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0000188;1.13e-21;9!CL:0000680;5.56e-18;7!CL:0000056;5.71e-18;4!CL:0000515;2.26e-11;3!CL:0002573;2.71e-11;2!CL:0000228;6.46e-09;1!CL:0002574;6.46e-09;1!CL:0002372;6.46e-09;1!CL:0000243;2.15e-07;15!CL:0000125;2.15e-07;15 | |ontology_enrichment_celltype_v019=CL:0000188;1.13e-21;9!CL:0000680;5.56e-18;7!CL:0000056;5.71e-18;4!CL:0000515;2.26e-11;3!CL:0002573;2.71e-11;2!CL:0000228;6.46e-09;1!CL:0002574;6.46e-09;1!CL:0002372;6.46e-09;1!CL:0000243;2.15e-07;15!CL:0000125;2.15e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000188,8.73e-22,9;CL:0000515,4.16e-18,4;CL:0002573,2.93e-11,2;CL:0002574,5.31e-09,1;CL:0000228,6.72e-09,1;CL:0002372,6.72e-09,1;CL:0000243,2.17e-07,15;CL:0000125,2.17e-07,15;CL:0000030,2.17e-07,15;CL:0000339,2.17e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000515;5.71e-18;4!CL:0000339;2.15e-07;15 | |ontology_enrichment_development_v019=CL:0000515;5.71e-18;4!CL:0000339;2.15e-07;15 | ||
|ontology_enrichment_disease=DOID:305!7.42e-07!106 | |ontology_enrichment_disease=DOID:305!7.42e-07!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!2.79e-15!9;UBERON:0001557!2.96e-09!19 | |ontology_enrichment_uberon=UBERON:0001737!2.79e-15!9;UBERON:0001557!2.96e-09!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;3.22e-30;16!UBERON:0002036;3.22e-30;16!UBERON:0002385;1.52e-14;31!UBERON:0001015;1.52e-14;31!UBERON:0000383;1.52e-14;31 | |ontology_enrichment_uberon_v019=UBERON:0001134;3.22e-30;16!UBERON:0002036;3.22e-30;16!UBERON:0002385;1.52e-14;31!UBERON:0001015;1.52e-14;31!UBERON:0000383;1.52e-14;31 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.82e-07,62;UBERON:0002036,4.82e-07,62;UBERON:0003082,4.82e-07,62;UBERON:0002385,8.65e-07,64;UBERON:0001015,8.65e-07,64;UBERON:0000383,8.65e-07,64 | |||
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| ||
|short_description=p31@LMO7 | |short_description=p31@LMO7 | ||
}} | }} |
Latest revision as of 00:18, 18 September 2015
Short description: | p31@LMO7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_31_at_LMO7_5end |
Coexpression cluster: | C1190_Skeletal_rhabdomyosarcoma_mesenchymal_giant_mucinous_skeletal_Hep2 |
Association with transcript: | 155bp_to_ENST00000497947_5end |
EntrezGene: | LMO7 |
HGNC: | 6646 |
UniProt: | E9PLU6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 8.73e-22 | 9 |
skeletal muscle myoblast | 4.16e-18 | 4 |
Schwann cell | 2.93e-11 | 2 |
stromal cell of pancreas | 5.31e-09 | 1 |
multinucleate cell | 6.72e-09 | 1 |
myotube | 6.72e-09 | 1 |
glial cell (sensu Vertebrata) | 2.17e-07 | 15 |
glial cell | 2.17e-07 | 15 |
glioblast | 2.17e-07 | 15 |
glioblast (sensu Vertebrata) | 2.17e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 4.82e-07 | 62 |
striated muscle tissue | 4.82e-07 | 62 |
myotome | 4.82e-07 | 62 |
muscle tissue | 8.65e-07 | 64 |
musculature | 8.65e-07 | 64 |
musculature of body | 8.65e-07 | 64 |