FFCP PHASE2:Hg19::chr2:167350747..167350765,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:6332 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:10594 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=6332 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=10594 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=C9JW43 | ||
|association_with_transcript=0bp_to_ENST00000419992_5end | |association_with_transcript=0bp_to_ENST00000419992_5end | ||
|cluster_id=chr2:167350747..167350765,- | |cluster_id=chr2:167350747..167350765,- | ||
Latest revision as of 00:18, 18 September 2015
| Short description: | p2@SCN7A |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_SCN7A_5end |
| Coexpression cluster: | C131_lung_trachea_Alveolar_thyroid_umbilical_throat_skin |
| Association with transcript: | 0bp_to_ENST00000419992_5end |
| EntrezGene: | SCN7A |
| HGNC: | 10594 |
| UniProt: | C9JW43 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@SCN7A |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 8.39e-55 | 114 |
| compound organ | 6.54e-15 | 68 |
| primary circulatory organ | 2.76e-10 | 27 |
| gastrointestinal system | 6.14e-09 | 25 |
| valve | 1.26e-08 | 3 |
| cardiac mesenchyme | 1.26e-08 | 3 |
| cardial valve | 1.26e-08 | 3 |
| tunica intima | 1.26e-08 | 3 |
| heart layer | 1.26e-08 | 3 |
| endocardium | 1.26e-08 | 3 |
Showing 1 to 10 of 24 entries
