FFCP PHASE1:Hg19::chr10:33212555..33212600,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3688 | |EntrezGene=3688 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6153 | |HGNC=6153 | ||
|TSSclassifier=strong | |||
|UniProt=P05556 | |UniProt=P05556 | ||
|association_with_transcript=64bp_to_BC113901_5end | |association_with_transcript=64bp_to_BC113901_5end | ||
|cluster_id=chr10:33212555..33212600,- | |||
|coexpression_cluster_id=C582 | |||
|description=CAGE_peak_9_at_ITGB1_5end | |description=CAGE_peak_9_at_ITGB1_5end | ||
|id=chr10:33212555..33212600,- | |id=chr10:33212555..33212600,- | ||
|ontology_enrichment_celltype=CL:0000055!9.20e-15!180;CL:0000548!4.03e-13!679;CL:0000004!4.03e-13!679;CL:0000255!4.03e-13!679;CL:0000057!7.03e-13!75;CL:0000012!3.04e-12!682;CL:0000144!7.79e-10!625;CL:0002371!1.10e-08!591;CL:0000222!1.37e-08!119;CL:0000220!5.66e-08!246;CL:0000680!6.17e-08!57;CL:0000056!6.17e-08!57;CL:0000355!6.17e-08!57;CL:0002321!7.71e-08!248;CL:0000359!1.75e-07!32;CL:0000003!2.07e-07!722;CL:0000192!3.26e-07!42;CL:0000514!3.26e-07!42;CL:0000187!5.02e-07!54 | |ontology_enrichment_celltype=CL:0000055!9.20e-15!180;CL:0000548!4.03e-13!679;CL:0000004!4.03e-13!679;CL:0000255!4.03e-13!679;CL:0000057!7.03e-13!75;CL:0000012!3.04e-12!682;CL:0000144!7.79e-10!625;CL:0002371!1.10e-08!591;CL:0000222!1.37e-08!119;CL:0000220!5.66e-08!246;CL:0000680!6.17e-08!57;CL:0000056!6.17e-08!57;CL:0000355!6.17e-08!57;CL:0002321!7.71e-08!248;CL:0000359!1.75e-07!32;CL:0000003!2.07e-07!722;CL:0000192!3.26e-07!42;CL:0000514!3.26e-07!42;CL:0000187!5.02e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0002334;7.81e-08;12!CL:0000134;3.75e-07;55!CL:0002620;8.69e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.03e-18,76;CL:0002334,6.93e-08,12;CL:0000723,9.73e-08,433;CL:0000048,2.32e-07,427;CL:0000680,4.70e-07,58;CL:0000056,4.70e-07,58;CL:0000355,4.70e-07,58;CL:0000034,5.37e-07,441;CL:0002620,6.92e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.68e-08!14 | |ontology_enrichment_disease=DOID:2394!4.68e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.96e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.98e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.44e-08!83;UBERON:0002329!1.44e-08!83;UBERON:0003077!1.44e-08!83;UBERON:0003059!1.44e-08!83;UBERON:0007282!1.44e-08!83;UBERON:0009618!1.44e-08!83;UBERON:0007285!1.44e-08!83;UBERON:0003102!5.59e-08!95;UBERON:0004872!1.13e-07!84;UBERON:0004290!1.22e-07!70;UBERON:0000486!1.47e-07!82;UBERON:0001637!1.51e-07!42;UBERON:0003509!1.51e-07!42;UBERON:0004572!1.51e-07!42;UBERON:0001134!1.59e-07!61;UBERON:0002036!1.59e-07!61;UBERON:0003082!1.59e-07!61;UBERON:0002385!2.63e-07!63;UBERON:0001015!2.63e-07!63;UBERON:0000383!2.63e-07!63;UBERON:0005256!3.37e-07!143 | |ontology_enrichment_uberon=UBERON:0000914!1.44e-08!83;UBERON:0002329!1.44e-08!83;UBERON:0003077!1.44e-08!83;UBERON:0003059!1.44e-08!83;UBERON:0007282!1.44e-08!83;UBERON:0009618!1.44e-08!83;UBERON:0007285!1.44e-08!83;UBERON:0003102!5.59e-08!95;UBERON:0004872!1.13e-07!84;UBERON:0004290!1.22e-07!70;UBERON:0000486!1.47e-07!82;UBERON:0001637!1.51e-07!42;UBERON:0003509!1.51e-07!42;UBERON:0004572!1.51e-07!42;UBERON:0001134!1.59e-07!61;UBERON:0002036!1.59e-07!61;UBERON:0003082!1.59e-07!61;UBERON:0002385!2.63e-07!63;UBERON:0001015!2.63e-07!63;UBERON:0000383!2.63e-07!63;UBERON:0005256!3.37e-07!143 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,3.29e-09,99;UBERON:0007524,3.77e-07,73;UBERON:0002329,5.09e-07,71;UBERON:0003059,5.09e-07,71;UBERON:0007282,5.09e-07,71;UBERON:0004290,5.09e-07,71;UBERON:0009618,5.09e-07,71;UBERON:0000486,5.85e-07,83;UBERON:0002097,6.34e-07,41;UBERON:0001134,7.21e-07,62;UBERON:0002036,7.21e-07,62;UBERON:0003082,7.21e-07,62;UBERON:0003077,9.50e-07,72;UBERON:0007285,9.50e-07,72 | |||
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| ||
|short_description=p9@ITGB1 | |short_description=p9@ITGB1 | ||
}} | }} |
Latest revision as of 00:19, 18 September 2015
Short description: | p9@ITGB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ITGB1_5end |
Coexpression cluster: | C582_Smooth_tenocyte_mesenchymal_leiomyoma_Fibroblast_Olfactory_Aortic |
Association with transcript: | 64bp_to_BC113901_5end |
EntrezGene: | ITGB1 |
HGNC: | 6153 |
UniProt: | P05556 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.03e-18 | 76 |
preadipocyte | 6.93e-08 | 12 |
somatic stem cell | 9.73e-08 | 433 |
multi fate stem cell | 2.32e-07 | 427 |
muscle precursor cell | 4.70e-07 | 58 |
myoblast | 4.70e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.70e-07 | 58 |
stem cell | 5.37e-07 | 441 |
skin fibroblast | 6.92e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
surface structure | 3.29e-09 | 99 |
dense mesenchyme tissue | 3.77e-07 | 73 |
somite | 5.09e-07 | 71 |
presomitic mesoderm | 5.09e-07 | 71 |
presumptive segmental plate | 5.09e-07 | 71 |
dermomyotome | 5.09e-07 | 71 |
trunk paraxial mesoderm | 5.09e-07 | 71 |
multilaminar epithelium | 5.85e-07 | 83 |
skin of body | 6.34e-07 | 41 |
skeletal muscle tissue | 7.21e-07 | 62 |
striated muscle tissue | 7.21e-07 | 62 |
myotome | 7.21e-07 | 62 |
paraxial mesoderm | 9.50e-07 | 72 |
presumptive paraxial mesoderm | 9.50e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.98e-10 | 14 |