FFCP PHASE1:Hg19::chr12:2800313..2800332,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=40119 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000541673_5end | |||
|cluster_id=chr12:2800313..2800332,- | |||
|coexpression_cluster_id=C3275 | |||
|description=CAGE_peak_1_at_CACNA1C-AS1_5end | |||
|id=chr12:2800313..2800332,- | |||
|ontology_enrichment_celltype=CL:0000791!2.72e-22!18;CL:0000789!2.72e-22!18;CL:0002420!2.72e-22!18;CL:0002419!2.72e-22!18;CL:0000790!2.72e-22!18;CL:0000084!3.85e-18!25;CL:0000827!3.85e-18!25;CL:0000542!5.30e-17!53;CL:0000051!5.30e-17!53;CL:0000037!7.99e-17!172;CL:0000566!7.99e-17!172;CL:0000988!1.14e-16!182;CL:0000838!2.78e-16!52;CL:0000625!4.76e-15!11;CL:0002032!2.90e-14!165;CL:0000837!2.90e-14!165;CL:0000738!7.87e-09!140;CL:0000624!2.71e-08!6;CL:0002087!3.38e-07!119;CL:0002031!4.13e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.11e-40;18!CL:0000789;6.11e-40;18!CL:0002419;6.11e-40;18!CL:0000625;1.55e-32;11!CL:0000084;1.69e-31;25!CL:0000542;1.08e-12;53!CL:0000624;4.49e-12;6!CL:0000623;5.45e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.35e-40,18;CL:0000789,3.35e-40,18;CL:0002420,3.35e-40,18;CL:0002419,3.35e-40,18;CL:0000790,3.35e-40,18;CL:0000625,1.47e-32,11;CL:0000084,1.03e-31,25;CL:0000827,1.03e-31,25;CL:0000838,2.47e-22,52;CL:0000542,8.40e-22,53;CL:0000051,8.40e-22,53;CL:0000037,4.68e-20,168;CL:0000988,1.63e-18,177;CL:0002032,2.10e-17,161;CL:0000837,2.10e-17,161;CL:0000624,2.71e-12,6;CL:0000623,6.49e-09,3;CL:0000825,6.49e-09,3;CL:0002087,7.63e-08,115;CL:0000738,2.11e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;6.11e-40;18!CL:0000051;1.08e-12;53 | |||
|ontology_enrichment_disease=DOID:1240!7.66e-08!39;DOID:8692!9.76e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;8.41e-16;31!DOID:1240;2.45e-11;39!DOID:2531;2.19e-09;51!DOID:0060083;2.19e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.13e-16,31;DOID:1240,2.87e-14,39;DOID:2531,1.02e-11,51;DOID:0060083,1.02e-11,51 | |||
|ontology_enrichment_uberon=UBERON:0000178!3.46e-11!15;UBERON:0000179!3.46e-11!15;UBERON:0000463!3.46e-11!15;UBERON:0007023!2.71e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;6.79e-08;2!UBERON:0005058;6.79e-08;2!UBERON:0009113;6.79e-08;2!UBERON:0002390;6.22e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.53e-08,4;UBERON:0005058,5.53e-08,4;UBERON:0009113,5.53e-08,4;UBERON:0003295,5.53e-08,4;UBERON:0005562,5.53e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,2.30297638858328,0.309632246632152,0,0,0,0,0,10.2760153767197,0,0.601633342410425,0.217010870715852,0.223915474239924,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0.546138611262131,0,0.853460445133014,0.800791974072025,0.574752439954483,0,0.954053754535364,1.1384259382189,0,1.52909291250092,5.28685314316103,1.68152568894461,6.05783394982677,1.57367816091066,1.57204305099666,1.64481199199607,1.00311897234407,4.88883399950386,5.20792586308207,9.74133642039557,0.779873198196215,0.883817722424512,0.886135578334485,1.35401931882508,1.15282187753108,0.520237390239513,1.64437904603676,1.38175008892924,1.15921234294021,3.11401782640327,3.74557159325598,3.1360657141493,0.793165398882963,2.29932296161153,3.09264700934367,3.28925599625354,3.82278497188916,5.85975108470777,4.75226022224187,3.91495309602209,4.47953139040464,3.74792179657038,4.49876778883632,2.46338399076314,2.01606743224732,2.13952156626806,3.04131248153878,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975789649036763,0.397589304964456,0.232387885739037,0.518305275076852,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,30.9024169590255,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0,0.288239906833923,0.12624243342638,0.444485260045183,0.381988425558278,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,1.18218456121156,1.2937654491571,1.54011643535698,0,0,0,0.502548796003046,0.637938751653163,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.620304078368662,0.862856803274467,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0,0.569647187174163,1.90585420366231,2.05681136543097,1.29694662238543,1.08006287447623,0.79312517629427,0,0,0,0.557409525377156,0,5.97591484126679,0.797131363644112,3.79200805722352,4.0216127727797,6.98522822988813,4.86932910411833,1.68478306868075,0,0,10.0253790836027,0.50787533340481,0,0,0,5.49608551609224,0,0,0,0,0,1.23087398947712,0,1.6653598399891,2.81974010175699,0,0,0,0,0,0,0,0,0,0,0,0,0.63337622438398,0,0.828851746593443,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694499979733169,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,2.35470384592537,3.98908036560375,0,0,0,0,3.33766815858795,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.370691816839509,0.104421949505455,0.134802265961354,0,0,0,0,0,0,0,0.61214552326098,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,8.94226116468806,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.687697182986169,0.415440338029185,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,1.06720276974141,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.320362237703084,0.157204305099666,0.414239055347196,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764467467344097,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0.115233987555779,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.285906176706625,0,0,0.521574816907738,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0.594600453887843,0,0.109940516745429,0,0.231522474323834,0,0,0,0,0.196308467114945,0,0,0,0.375935671919414,0.837952543656503,0,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0.26721740526556,1.92979289023174,0.50141507858475,0.151557396436479,0,0,0.103432995861895,0.426467963801962,0.714193294391221,9.23621410654887,10.1802531445207,0,0,0,0,0,1.48174516632093,0.0717222053926763,0,0,0,0,0,0,0,0,0,3.22038069745642,0 | |||
|short_description=p1@CACNA1C-AS1 | |||
}} |
Latest revision as of 00:33, 18 September 2015
Short description: | p1@CACNA1C-AS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CACNA1C-AS1_5end |
Coexpression cluster: | C3275_Hodgkin_acute_thymus_CD34_CD133_granulocyte_CD4 |
Association with transcript: | 0bp_to_ENST00000541673_5end |
EntrezGene: | NA |
HGNC: | 40119 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.35e-40 | 18 |
alpha-beta T cell | 3.35e-40 | 18 |
immature T cell | 3.35e-40 | 18 |
mature T cell | 3.35e-40 | 18 |
immature alpha-beta T cell | 3.35e-40 | 18 |
CD8-positive, alpha-beta T cell | 1.47e-32 | 11 |
T cell | 1.03e-31 | 25 |
pro-T cell | 1.03e-31 | 25 |
lymphoid lineage restricted progenitor cell | 2.47e-22 | 52 |
lymphocyte | 8.40e-22 | 53 |
common lymphoid progenitor | 8.40e-22 | 53 |
hematopoietic stem cell | 4.68e-20 | 168 |
hematopoietic cell | 1.63e-18 | 177 |
hematopoietic oligopotent progenitor cell | 2.10e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.10e-17 | 161 |
CD4-positive, alpha-beta T cell | 2.71e-12 | 6 |
natural killer cell | 6.49e-09 | 3 |
pro-NK cell | 6.49e-09 | 3 |
nongranular leukocyte | 7.63e-08 | 115 |
leukocyte | 2.11e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
thymus | 5.53e-08 | 4 |
hemolymphoid system gland | 5.53e-08 | 4 |
thymic region | 5.53e-08 | 4 |
pharyngeal gland | 5.53e-08 | 4 |
thymus primordium | 5.53e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.13e-16 | 31 |
leukemia | 2.87e-14 | 39 |
hematologic cancer | 1.02e-11 | 51 |
immune system cancer | 1.02e-11 | 51 |