FFCP PHASE1:Hg19::chr16:81272369..81272383,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53630 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13815 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HAY6 | |||
|association_with_transcript=73bp_to_NM_017429,uc002fgm.1,uc002fgn.1,uc010vnp.1_5end | |||
|cluster_id=chr16:81272369..81272383,+ | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_3_at_BCMO1_5end | |||
|id=chr16:81272369..81272383,+ | |||
|ontology_enrichment_celltype=CL:0002603!1.18e-08!3;CL:0000128!6.12e-08!7;CL:0000126!6.12e-08!7;CL:0000127!6.12e-08!7;CL:0002453!6.12e-08!7;CL:0002319!3.57e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000047;6.30e-21;2!CL:0002319;6.92e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,6.82e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.60e-14;3!UBERON:0006601;1.58e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.04e-31!86;UBERON:0000073!2.71e-28!94;UBERON:0001016!2.71e-28!94;UBERON:0001017!1.48e-27!82;UBERON:0000955!2.11e-24!69;UBERON:0006238!2.11e-24!69;UBERON:0002616!3.20e-23!59;UBERON:0001049!3.40e-21!57;UBERON:0005068!3.40e-21!57;UBERON:0006241!3.40e-21!57;UBERON:0007135!3.40e-21!57;UBERON:0003075!4.97e-19!86;UBERON:0007284!4.97e-19!86;UBERON:0002346!5.16e-18!90;UBERON:0002780!1.56e-16!41;UBERON:0001890!1.56e-16!41;UBERON:0006240!1.56e-16!41;UBERON:0003080!4.28e-16!42;UBERON:0000033!2.57e-15!123;UBERON:0007023!6.93e-15!115;UBERON:0003056!1.24e-14!61;UBERON:0000153!2.08e-14!129;UBERON:0007811!2.08e-14!129;UBERON:0003296!6.10e-14!4;UBERON:0010133!6.10e-14!4;UBERON:0004121!9.91e-14!169;UBERON:0001894!1.95e-13!7;UBERON:0006222!1.95e-13!7;UBERON:0000924!2.65e-13!173;UBERON:0006601!2.65e-13!173;UBERON:0001905!5.89e-13!2;UBERON:0002757!5.89e-13!2;UBERON:0010134!5.89e-13!2;UBERON:0002784!5.89e-13!2;UBERON:0005408!5.89e-13!2;UBERON:0001899!5.89e-13!2;UBERON:0000369!9.39e-13!4;UBERON:0002435!9.39e-13!4;UBERON:0000204!9.39e-13!4;UBERON:0010082!9.39e-13!4;UBERON:0001869!2.53e-09!32;UBERON:0002791!5.13e-09!33;UBERON:0001896!8.41e-09!3;UBERON:0005290!8.41e-09!3;UBERON:0010096!8.41e-09!3;UBERON:0002020!1.00e-08!34;UBERON:0003528!1.00e-08!34;UBERON:0001893!1.00e-08!34;UBERON:0005383!3.02e-08!3;UBERON:0005382!3.02e-08!3;UBERON:0004733!6.30e-08!12;UBERON:0002028!6.30e-08!12;UBERON:0007277!6.30e-08!12;UBERON:0009663!1.70e-07!7;UBERON:0004732!2.54e-07!13;UBERON:0001874!7.57e-07!1;UBERON:0002022!8.98e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;3.81e-21;2!UBERON:0002757;3.81e-21;2!UBERON:0010134;3.81e-21;2!UBERON:0005408;3.81e-21;2!UBERON:0001899;3.81e-21;2!UBERON:0001896;1.96e-14;3!UBERON:0005290;1.96e-14;3!UBERON:0003296;2.80e-11;4!UBERON:0010133;2.80e-11;4!UBERON:0002784;2.80e-11;4!UBERON:0000966;2.97e-09;5!UBERON:0005388;2.97e-09;5!UBERON:0001802;2.97e-09;5!UBERON:0002298;7.01e-08;6!UBERON:0001894;5.38e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,3.81e-21,2;UBERON:0002757,3.81e-21,2;UBERON:0010134,3.81e-21,2;UBERON:0005408,3.81e-21,2;UBERON:0001899,3.81e-21,2;UBERON:0001896,2.09e-14,3;UBERON:0005290,2.09e-14,3;UBERON:0010096,2.09e-14,3;UBERON:0003296,2.80e-11,4;UBERON:0010133,2.80e-11,4;UBERON:0002784,2.80e-11,4;UBERON:0001017,2.64e-08,81;UBERON:0000966,6.34e-08,6;UBERON:0005388,6.34e-08,6;UBERON:0001802,6.34e-08,6;UBERON:0002298,7.25e-08,6;UBERON:0001016,1.50e-07,89;UBERON:0001894,5.38e-07,7;UBERON:0006222,5.38e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306806047506464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,1.14681839138014,0.443716206147409,0,6.08733993719416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,5.71682327772001,0,0.455324382702595,0,0,0,0,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0,3.78825684136279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@BCMO1 | |||
}} |
Latest revision as of 00:50, 18 September 2015
Short description: | p3@BCMO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BCMO1_5end |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | 73bp_to_NM_017429, uc002fgm.1, uc002fgn.1, uc010vnp.1_5end |
EntrezGene: | BCMO1 |
HGNC: | 13815 |
UniProt: | Q9HAY6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 6.82e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
pineal body | 3.81e-21 | 2 |
regional part of epithalamus | 3.81e-21 | 2 |
secretory circumventricular organ | 3.81e-21 | 2 |
circumventricular organ | 3.81e-21 | 2 |
epithalamus | 3.81e-21 | 2 |
medulla oblongata | 2.09e-14 | 3 |
myelencephalon | 2.09e-14 | 3 |
future myelencephalon | 2.09e-14 | 3 |
gland of diencephalon | 2.80e-11 | 4 |
neuroendocrine gland | 2.80e-11 | 4 |
regional part of diencephalon | 2.80e-11 | 4 |
central nervous system | 2.64e-08 | 81 |
retina | 6.34e-08 | 6 |
photoreceptor array | 6.34e-08 | 6 |
posterior segment of eyeball | 6.34e-08 | 6 |
brainstem | 7.25e-08 | 6 |
nervous system | 1.50e-07 | 89 |
diencephalon | 5.38e-07 | 7 |
future diencephalon | 5.38e-07 | 7 |