FFCP PHASE1:Hg19::chr9:87284438..87284450,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:87284438..87284450,+ to FFCP PHASE1:Hg19::chr9:87284438..87284450,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4915 | |EntrezGene=4915 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8032 | |HGNC=8032 | ||
|TSSclassifier=strong | |||
|UniProt=Q16620,Q59GJ1 | |UniProt=Q16620,Q59GJ1 | ||
|association_with_transcript=-144bp_to_NM_001018065,NM_001018066,uc004aob.1,uc011lsz.1,uc011lta.1_5end | |||
|cluster_id=chr9:87284438..87284450,+ | |||
|coexpression_cluster_id=C963 | |||
|description=CAGE_peak_16_at_NTRK2_5end | |||
|id=chr9:87284438..87284450,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.04e-16;82!UBERON:0006215;6.22e-10;3!UBERON:0010122;7.61e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.90e-62!115;UBERON:0001049!7.64e-57!57;UBERON:0005068!7.64e-57!57;UBERON:0006241!7.64e-57!57;UBERON:0007135!7.64e-57!57;UBERON:0002616!2.89e-47!59;UBERON:0003075!2.00e-46!86;UBERON:0007284!2.00e-46!86;UBERON:0001017!5.55e-44!82;UBERON:0002346!1.93e-43!90;UBERON:0003080!2.66e-43!42;UBERON:0000955!4.70e-43!69;UBERON:0006238!4.70e-43!69;UBERON:0005743!8.59e-43!86;UBERON:0002780!4.10e-42!41;UBERON:0001890!4.10e-42!41;UBERON:0006240!4.10e-42!41;UBERON:0000073!1.60e-38!94;UBERON:0001016!1.60e-38!94;UBERON:0001893!3.23e-34!34;UBERON:0002020!6.03e-34!34;UBERON:0003528!6.03e-34!34;UBERON:0003056!7.98e-34!61;UBERON:0002791!8.79e-33!33;UBERON:0001869!5.06e-32!32;UBERON:0000153!3.40e-29!129;UBERON:0007811!3.40e-29!129;UBERON:0000033!4.05e-29!123;UBERON:0001950!2.06e-27!20;UBERON:0002619!3.95e-27!22;UBERON:0004121!9.99e-24!169;UBERON:0000956!4.36e-23!25;UBERON:0000203!4.36e-23!25;UBERON:0000924!1.12e-22!173;UBERON:0006601!1.12e-22!173;UBERON:0003076!3.70e-14!15;UBERON:0003057!3.70e-14!15;UBERON:0002420!7.39e-13!9;UBERON:0007245!7.39e-13!9;UBERON:0010009!7.39e-13!9;UBERON:0010011!7.39e-13!9;UBERON:0000454!7.39e-13!9;UBERON:0002308!1.88e-12!9;UBERON:0000125!1.88e-12!9;UBERON:0000025!3.70e-12!194;UBERON:0004732!5.93e-12!13;UBERON:0004733!7.48e-11!12;UBERON:0002028!7.48e-11!12;UBERON:0007277!7.48e-11!12;UBERON:0004111!1.08e-10!241;UBERON:0000477!2.79e-10!286;UBERON:0009663!4.56e-10!7;UBERON:0000200!4.67e-10!6;UBERON:0001871!8.57e-10!7;UBERON:0002680!1.17e-09!9;UBERON:0001895!1.17e-09!9;UBERON:0010092!1.17e-09!9;UBERON:0000475!1.51e-09!365;UBERON:0001894!3.20e-09!7;UBERON:0006222!3.20e-09!7;UBERON:0000064!4.16e-09!219;UBERON:0001872!2.29e-08!5;UBERON:0002021!2.32e-08!5;UBERON:0002298!2.88e-08!8;UBERON:0000483!8.80e-08!309;UBERON:0000481!8.94e-08!347;UBERON:0000119!1.58e-07!312;UBERON:0000369!4.59e-07!4;UBERON:0002435!4.59e-07!4;UBERON:0000204!4.59e-07!4;UBERON:0010082!4.59e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;7.50e-55;32!UBERON:0001950;9.11e-55;20!UBERON:0002619;1.20e-54;22!UBERON:0001893;5.00e-54;34!UBERON:0003528;2.32e-53;34!UBERON:0002020;2.32e-53;34!UBERON:0002791;5.32e-51;32!UBERON:0000956;1.22e-47;25!UBERON:0000203;1.22e-47;25!UBERON:0000073;6.50e-47;53!UBERON:0002616;6.50e-47;53!UBERON:0002780;1.25e-46;41!UBERON:0001890;1.25e-46;41!UBERON:0000955;5.32e-30;68!UBERON:0001017;1.34e-29;75!UBERON:0001016;1.05e-25;83!UBERON:0004732;7.15e-20;13!UBERON:0000200;1.11e-18;6!UBERON:0004733;1.16e-17;12!UBERON:0002028;1.16e-17;12!UBERON:0007023;4.02e-16;114!UBERON:0001871;7.74e-16;6!UBERON:0002420;9.51e-16;9!UBERON:0007245;9.51e-16;9!UBERON:0010009;9.51e-16;9!UBERON:0010011;9.51e-16;9!UBERON:0000454;9.51e-16;9!UBERON:0002021;1.56e-15;5!UBERON:0001872;1.87e-15;5!UBERON:0000125;4.94e-15;9!UBERON:0002308;4.94e-15;9!UBERON:0002680;1.02e-14;9!UBERON:0001895;1.02e-14;9!UBERON:0000369;1.12e-12;4!UBERON:0002435;1.12e-12;4!UBERON:0000204;1.12e-12;4!UBERON:0002298;2.71e-11;6!UBERON:0009663;1.33e-10;7!UBERON:0011216;1.68e-10;132!UBERON:0000349;3.20e-10;5!UBERON:0001870;4.01e-10;3!UBERON:0005383;9.04e-10;3!UBERON:0005382;9.04e-10;3!UBERON:0000988;1.09e-08;3!UBERON:0010314;1.10e-08;132!UBERON:0002037;3.61e-08;6!UBERON:0002702;2.38e-07;2!UBERON:0001876;2.82e-07;2!UBERON:0002771;3.38e-07;2!UBERON:0001873;7.61e-07;2!UBERON:0002360;7.61e-07;2!UBERON:0000094;7.61e-07;2!UBERON:0010743;7.61e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.69e-87,56;UBERON:0005068,4.69e-87,56;UBERON:0006241,4.69e-87,56;UBERON:0007135,4.69e-87,56;UBERON:0000073,6.81e-84,53;UBERON:0002616,6.81e-84,53;UBERON:0000955,4.64e-69,68;UBERON:0006238,4.64e-69,68;UBERON:0001017,1.54e-68,81;UBERON:0002780,2.47e-66,41;UBERON:0001890,2.47e-66,41;UBERON:0003080,2.47e-66,41;UBERON:0006240,2.47e-66,41;UBERON:0001016,2.04e-63,89;UBERON:0001893,3.12e-62,34;UBERON:0003075,8.81e-62,82;UBERON:0007284,8.81e-62,82;UBERON:0001869,1.02e-61,32;UBERON:0003528,1.05e-61,34;UBERON:0002020,1.05e-61,34;UBERON:0002346,2.14e-58,86;UBERON:0002791,8.45e-57,32;UBERON:0001950,8.27e-55,20;UBERON:0002619,9.67e-55,22;UBERON:0010371,1.01e-48,104;UBERON:0000956,1.01e-47,25;UBERON:0000203,1.01e-47,25;UBERON:0003056,1.48e-47,61;UBERON:0007023,2.89e-46,114;UBERON:0010314,3.85e-42,132;UBERON:0004121,4.01e-32,171;UBERON:0000924,4.01e-32,171;UBERON:0006601,4.01e-32,171;UBERON:0011216,2.22e-25,223;UBERON:0003076,9.02e-21,15;UBERON:0003057,9.02e-21,15;UBERON:0004732,4.45e-20,13;UBERON:0000025,5.08e-20,192;UBERON:0000200,8.39e-19,6;UBERON:0004733,6.87e-18,12;UBERON:0002028,6.87e-18,12;UBERON:0007277,6.87e-18,12;UBERON:0001871,5.03e-16,6;UBERON:0002420,8.73e-16,9;UBERON:0007245,8.73e-16,9;UBERON:0010009,8.73e-16,9;UBERON:0010011,8.73e-16,9;UBERON:0000454,8.73e-16,9;UBERON:0001872,2.24e-15,5;UBERON:0002021,2.31e-15,5;UBERON:0000125,3.89e-15,9;UBERON:0002308,3.89e-15,9;UBERON:0002680,7.36e-15,9;UBERON:0001895,7.36e-15,9;UBERON:0010092,7.36e-15,9;UBERON:0004111,1.14e-14,240;UBERON:0000483,8.02e-13,306;UBERON:0000369,9.66e-13,4;UBERON:0002435,9.66e-13,4;UBERON:0000204,9.66e-13,4;UBERON:0010082,9.66e-13,4;UBERON:0000119,1.40e-12,309;UBERON:0002298,1.44e-11,6;UBERON:0009663,1.47e-10,7;UBERON:0000349,2.47e-10,5;UBERON:0001870,3.20e-10,3;UBERON:0005383,7.24e-10,3;UBERON:0005382,7.24e-10,3;UBERON:0000988,6.79e-09,3;UBERON:0002037,3.76e-08,6;UBERON:0006215,3.76e-08,6;UBERON:0002702,2.01e-07,2;UBERON:0001876,2.14e-07,2;UBERON:0002771,3.39e-07,2;UBERON:0001873,6.01e-07,2;UBERON:0010122,6.01e-07,2;UBERON:0002360,7.62e-07,2;UBERON:0000094,7.62e-07,2;UBERON:0010743,7.62e-07,2 | |||
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|short_description=p16@NTRK2 | |||
}} | }} |
Latest revision as of 01:00, 18 September 2015
Short description: | p16@NTRK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_NTRK2_5end |
Coexpression cluster: | C963_mesodermal_hippocampus_amygdala_medulla_thalamus_brain_corpus |
Association with transcript: | -144bp_to_NM_001018065, NM_001018066, uc004aob.1, uc011lsz.1, uc011lta.1_5end |
EntrezGene: | NTRK2 |
HGNC: | 8032 |
UniProt: | Q16620Q59GJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data